CmUC11G208100.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGTCGGAGATGACGCCGTCGGCTAGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCATCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGTCATTGTTCATACAGTTAAATTATTACTAAACTCAAAAGTTTCAAAATTAACATCATATCTAAAATATTAAATTATTAATAGTAACAAAAGTTTAAATGTAAAGATTATTGTACATTTAGGCACATTTAGGCTCGCTTTATATATATTAAAAAATAATGTTTGTTTTCTCATTAATTATTTATACGTTTTTTTTCTTTTCTTATAAACTCATTTTTAAAAACTGCTTGTAGGCACATTTAGACTCGCTTTATATATATTAAAAAATAATGTTTGTTTTCTCATTAATTACTTATATGTTTTTTTTTTCTTTTCTTATAAACTACTTGTTTTAATTTTCAAATTTTATCATGGTTTTTAAAATTTTTAAAGGAGGTGATACAACCAATATATATATATATATATATATATATATATATATATAGTAGTAATTATAGCTAGTATTTATTTTAATTTTTTGAAATTTAGCTGTAGATTAAATGTTTTTGTAAAGGAAAAAAAAAGAAAGAATTATGAGAAAAAGCGTGAAAATAAAAACAAGCACAAATTTAAAAAGGTGAGTGAATGTGAAAGGAGGAAATGGAAAGTAATGAAATTAAGACGTTATATTTAATAACTTATTCATATTGTTGGATGCAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGTAACAACATAATCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCTACAACAATATATTTTTATCTCCCCTTTTCGTTTTATCCTCCACTTTCAAAATGTTTTACTTTTAGTCCTTAATTAGTTTCGAGTTTGGTTTCGATTTAGTTTCTAAATTTTAACATGTTATAATTTTATTCTTGAGATTTGAGTTTTGTTTCAATTTAGTCTCTACGTTTTGAGATTTACAATTTTAACCTTGTTTTTTCCATTAAAAATTCACTTCTCCACTTAGTGGTTAATGTCTATTAATTAATTTAGAAGAATAAAAAGAATTTATTTTAAAATTTCACTTTGTAATTATTTTAAATTAATTTATAGATATTGGTGCCAAAGACTAAATTGAGTATTTAATGAAAAATTGAAGTTAAAGGTGCAAATTTTAAAACCTAAGGATCAAGTTGAAACAAGACTCAAATCTCAATGGTAAAATTGTAACATTTTGAAACTTATAGACTTAAATTGAAATCAAACTCAAAACTTAAGGACTAAAAATGTAACATTTTGAAACCTAGGGACCAAAATAGACCCAAATCCTAAGGACCAAAAATGTAATTTTTTTTCCTCTTTTTTGGGTTAAATTAAAATTTTAATATTTGAACTTTCGATTTTCTTTTTTTTAAAAAAACACAAATGTACTAAAAATTGAAAATTTAGAATTTTATTTGACATAAAAAATTTAAATTTATATCTAATAGATCAATTAATTTTATAAAGTTTCAAACTTGTCAAAAAATCTATTAGACACAAAATTGAGAATTCACCAATATATTAGATACTTCAAAGGTTCATGAACAAAATATACACAAACACCAAAGTTTGGATCTAAACCTATCATTTATTACTTTTTTAATGGTTAAATTAAAAGTTTAGTTCTTCAACTTTCAAAATGGGTCTAATAGGTTTTTAAAACTTTTAATTTTATGTCAAATAGGGCCCCTAGACTTTAAAGAAAAATGTCTAATAAATTCTTAAATTTGTGTTTAATAGATATCTATTTTTTTTCAATTTTATATCTAATATATCTTTGACTTCTTCGACATGTTTATTAAAATGAACATATATACTAAACATAAAATTGAAATTTTAGGATTTAATTAGATATTAAATTCAATTTTGTATCTTAATCATTAGTTATCAATTAATCTTTTCTTTTGAAAAAATTGAATATATGAGAAACACCTTTTAGTTTAGAAATTATTAAATAAACAATTTATTATAAAAGTTAAGAGTAATTTAAAGAATTTATTTTTAGTATTGTTTTTGTTTGTTTATGGGGAAAATGGAATGATGTAAATATGTGAATATTGCAGGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGGTCATAAATTCATCCAAATTAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTTTTTGAAAATTTTCACTAAATTTTTTTTTTTTTTTTTCTTCCTCCCCCTCTGTCTCGTGCAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTAAGATTAATAATCATCCAACTCGGACGTATTGCTAATAGAAGTCTATCATATATAAATTTTGTTATGTTTGCAATTTTTTATAAATGTTGCTTTATACTTAATTATTTGCCCTAAAAATAATTTTCTTATAAAAAACAAAAAAGGTAGGAAAAAATCCATCCTTCCTCTCTTGGGTTCCGTCGAGCATCATCATCTCCTACCTCTCCTTCCTTCAATCCCTCATGGAAGCTTTGTTCCACATCGCCAGTTTGGGAGATAACAAATAAGAGTTTAAATACATGGGATTGTTTAAATACATGGGTTTTATCTCAAAATCAATTTCAGTGAGATCTTCAACATGCTACCGTAATTTTTTTTAAATTGAATACTTATTCGAGTTGCAATATAGTGGGCCAAAGGAGAGGAGGGCTAATGGAGGGAGAGGAATGAGGGATTCTTTTTTTTTTTATTTTTAACAAAATTAACACATCACCATTTTTTATTATAAAAATGTCACATCGAGGTCCCAAATTCATATTATATGATTTTCTGAACTTGAGGATAAGATTGAATAATCTTAAAATCTAAATACAAAATTTTTTTATTGTCCAAACTTTAGATACCAAAAGTATATGAACGTATTCAAAAATGTAATTTAATACTAAATAATCTTTTTTTTTTTAATGGTTAATTTCAATATTTTTATATTTAATAATATAAAACAATAATTTTCGTTTAACATTCTAACAAATTTTTTTAAAAAAATTACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTGTAATTTCCTCTTCTTTTTTTTTCCTCTCTAATTCAAATTCTTCATCTTTTAAATGGTTTTTTTTTTCTTCTTTTTTGTAGCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA ATGTTGAAGTCGGAGATGACGCCGTCGGCTAGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCATCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA ATGTTGAAGTCGGAGATGACGCCGTCGGCTAGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCATCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA MLKSEMTPSARLKRQRPHGDCRSLSSVSTPASRVNHFEDLVASGGWPELAKYEISSTKFRTNQTCSLLTEANSVVEGEIAKKRKGKKKEMKWKGRDDNNNVEWGNGREKKMKGKVEEDEDDEDESKITEERERWKCNSKASKEVQKSDYVHVRARRGQATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSMKVAALNHRVDFINVDDFLAKQVFPTLTTDCSSYFNQLGKGSTSVTVPQTPLINNNLSSITHFELSSTWGGDLQRFEEGGPPLLSPSSFLSQQCSGIEDENETLFLDHKLVPF Homology
BLAST of CmUC11G208100.1 vs. NCBI nr
Match: XP_038901962.1 (transcription factor bHLH62-like isoform X3 [Benincasa hispida]) HSP 1 Score: 508.4 bits (1308), Expect = 4.5e-140 Identity = 279/337 (82.79%), Postives = 295/337 (87.54%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. NCBI nr
Match: XP_038901961.1 (transcription factor bHLH63-like isoform X2 [Benincasa hispida]) HSP 1 Score: 507.7 bits (1306), Expect = 7.6e-140 Identity = 279/339 (82.30%), Postives = 295/339 (87.02%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. NCBI nr
Match: XP_038901960.1 (transcription factor bHLH63-like isoform X1 [Benincasa hispida]) HSP 1 Score: 502.7 bits (1293), Expect = 2.5e-138 Identity = 279/341 (81.82%), Postives = 295/341 (86.51%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. NCBI nr
Match: KAA0045545.1 (transcription factor bHLH78 [Cucumis melo var. makuwa] >TYK28847.1 transcription factor bHLH78 [Cucumis melo var. makuwa]) HSP 1 Score: 461.5 bits (1186), Expect = 6.3e-126 Identity = 270/348 (77.59%), Postives = 286/348 (82.18%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. NCBI nr
Match: XP_004148863.3 (transcription factor bHLH78 isoform X2 [Cucumis sativus] >KAE8651873.1 hypothetical protein Csa_006710 [Cucumis sativus]) HSP 1 Score: 458.4 bits (1178), Expect = 5.3e-125 Identity = 262/345 (75.94%), Postives = 289/345 (83.77%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.4e-35 Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy Swiss-Prot
Match: Q93VJ4 (Transcription factor BEE 2 OS=Arabidopsis thaliana OX=3702 GN=BEE2 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33 Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.8e-33 Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy Swiss-Prot
Match: Q9ZPW3 (Transcription factor HBI1 OS=Arabidopsis thaliana OX=3702 GN=HBI1 PE=1 SV=3) HSP 1 Score: 139.0 bits (349), Expect = 9.3e-32 Identity = 95/192 (49.48%), Postives = 116/192 (60.42%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.7e-31 Identity = 100/228 (43.86%), Postives = 130/228 (57.02%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy TrEMBL
Match: A0A5D3DY78 (Transcription factor bHLH78 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00550 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 3.0e-126 Identity = 270/348 (77.59%), Postives = 286/348 (82.18%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy TrEMBL
Match: A0A0A0LIZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247590 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 2.9e-92 Identity = 216/345 (62.61%), Postives = 244/345 (70.72%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy TrEMBL
Match: A0A6J1L7P5 (transcription factor bHLH63-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499945 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91 Identity = 215/345 (62.32%), Postives = 250/345 (72.46%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy TrEMBL
Match: A0A6J1G5R2 (transcription factor bHLH63-like OS=Cucurbita moschata OX=3662 GN=LOC111451059 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 2.4e-91 Identity = 215/343 (62.68%), Postives = 241/343 (70.26%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. ExPASy TrEMBL
Match: A0A6J1L4Z2 (transcription factor bHLH63-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499945 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 4.1e-91 Identity = 214/345 (62.03%), Postives = 249/345 (72.17%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. TAIR 10
Match: AT4G34530.1 (cryptochrome-interacting basic-helix-loop-helix 1 ) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-36 Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. TAIR 10
Match: AT4G36540.2 (BR enhanced expression 2 ) HSP 1 Score: 145.6 bits (366), Expect = 7.1e-35 Identity = 81/139 (58.27%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. TAIR 10
Match: AT4G36540.1 (BR enhanced expression 2 ) HSP 1 Score: 144.1 bits (362), Expect = 2.1e-34 Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34 Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 0
BLAST of CmUC11G208100.1 vs. TAIR 10
Match: AT2G18300.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 6.6e-33 Identity = 95/192 (49.48%), Postives = 116/192 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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