CmUC09G176330.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC09G176330.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 30600162 .. 30604072 (+)
Sequence length479
RNA-Seq ExpressionCmUC09G176330.1
SyntenyCmUC09G176330.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTCCCTTCTTCTTCAATACAACTAGAATCTTTCCTTTCATAAAGCTCTATTCACACCTCTCTCTCTCTCTCTCTCTTCTTTTCAAAAAACATGTCCAAAATAGTGATAAAAGAAAGAGACAGAATCCCAAAAATTAATTTATACCTACAAAAGGAGAAGAAAAAAAAAACCATAGTTTCTTGAGCCTTCTCATTAAGTATTGTGATTCATATACTCTGTTCTTCCTCTTCTTGTCTTGGCATATAAGCTTGTGTTGGATAGAAGATATGAGTGATCCCAAATATGCCTATCCCCATCCACCTCCTCAAGGTATGTTTTTTACCTATTTATTTATGTTTAAACGGTTGAACTATGTTGAAGTTAGTCGTTTTTTGAGTTTTGTTTGATTTAGTTGTGAACTTATTTGTAGGAGGGTATTATCAAGGGCTGCCCGTGATGGCGCTATGGCCATACCCGCCACCCAAAAGATAATCGAGCTTCTTGAAGAGATGGTATGCCATTTGTTGTTAAAGGGTATGTTTGGGATTGTATTTTAAATAGTTAAAATTAATTGTCATTTTTACAATTGCGTGCTATGAAACATGTTTTTAATGATTCAAAGCCAATTTTGATGTTATGAAAATTGCATTTAAGAGTGTAAAATTAAATATTAAATTAATTTTAAGTAATTAAAAATATGTTTTAGAGTGACTTTAAACGTGATAAAATTGATTTTAACAATTTCAAAATCACTTCATATTAACTCTCTATTAGATGGGTTTTGGTTTTGCTTGCATACATGAAAGTGAAGGTTAAAATTGAGGGTGTTGGGATGATTTTTAGAAAGGAAAAACAAAAACTAATATTTTTACTATCCAAAATAAAATATGTCTAGTTTCCGCTAGGGCGATAAGAAATAGTTCATTATAAAAAATAAAAATAATAAAAATAATAAAAAATTCTACCTTTGATGTTGCTTCTTCATGTTCTCCTTTCTCGAGCTCTAAACTTAAGAGGTATTCAAAAAATTCAATGACTTGAAAATTTTGATCAACCCAATTCAACTCATACGGTTTGGGTTGAGTTGAGTTCAAATAAATGAACATTTTATGAGTTTGGTTGCTTCATAGATTCACCTAAAATATAACCTAAATCAACTCAAACTTATTATTTTAAATGACAAAATTGTGAATTTTTTTTACAAATAATAGCAAAATATCACAGTCTATTTGCAATGTATTGTAATAGACTACTATTTTTGTCTATCATGAAACAGATAGATACATATAATAGTATCTATTGCAGATAGACAATAAAATTTTGTAGTTTAATTAATTTTTCTAAATTTGAAAACATCCCATATATATATACTTATGGTATATACATATTTTTGTTTTTGTTTTATTTTATTTCATGATTTTTTTAGATAATTTATTCTCCAACAACTTCTCAAAATAACATTTTAGCTCTTTGGAAAGAAAATTTTCATAAAATAAGTTGACATTAAGTTGTTAATCTTAATTCAATATATGAAAATAATTAAATAATTTTTTTTTTTTTTTACAATTTTACAATTTACTTATTTTTAGAACAAAAAGTTATATCAATGACCTGAATAACCAAAACCAACTGATGTAGCGCAAGCGCACACGTCAAGTAATAGTTTATGAAATGGTTCAAACCAAGTATCGTTTCATTGGGGATCCAGTTAGGGTTTAATTACCTAGCTATTTTAGAATAGAATCAATTTTATTTAAGGAATAAAAATCGAGTTTTTATGATGTAAATGTTGAAAGCGATAAAGAAAGTAAAGTAAAGTTAAGTTGAAAGTTCAAGAGTCAAAGAGTGTTCTAGGGTATTGATTCATTATTTAATTTATTATGCAATGTTTAGGGTTTAATGGAATTAATTATAAATTATATACCTAAGACAAGAAACTTAAGTCTGGATTATTTTCTTTAAAAAAAAAAAATCATTTTTCATGCAATTTAAATGATTACTAATTTCTTGAAACCAAATTAAATCACATGTCATTTGGTCGGTTTGGAACCTCATGATTTTGAAGGATTTCAATTAATGACAGATTTCAAATGAATTTTGTTGTTTGTTACTTCCAAAAAGCGAATGATTTTAAAAATCCGGAGTGATTTCAAATCCTATTTTACTTTTTAAAAAAACTTTCCAGGTCAAAATGCTGGATTTTGCAGGATTTCATAGGATTTAAAAGTAATTTACTTAATTAACCTTGTCATATTCTAATTTTCAATTAACACATCTTAGTTAAAAGTCTATATTAGTAAATTCTTAACTTTCATTTCCTTTTTAGTTGCCATCCAAATACAAAATTTTAAATACAATCATTTCAAATCTTTCTCGTTCTAGACAAAGTAATTAATTTAAAATCATTTATTGAATTTCAAATCACAGGATTTAAAATCATTTCTTCAACTTTCTTAGATCCAAATGGAGGCTAAGTATCGTATTCAGCAACTTTCACTATTAACCTAACTATTTCAACCAATAATTAATCAATCTTATAAATCCAGTTAAACATACAATCCATCGAATTGAATATCTAACCTAACATTCATTAAAGACCAATCAATAAAAATTAAGTATAATAACATTGAAAAGCATATTGTTTACAACAATCCATGAAAAGTCTAAAACATGAACATAATTTCATAAATAAATCCTCAATACTTAAAACTAAAAATTTTAGCCCCTCGTAGCTTTAGAACACATCATTGCATACAAATTCTTAATTTAGAAGAGTAAGAGAATGAGGATTAAAGAAAATTCTACTAGCAAAGAGCCCTCCATTGGTTGAAAACTAACAAAACTCCCTTTAATTGACACCTTGGAAACTCGAACGGCTTCCAAACCTTCTTGCATTTTTTTTCTCTCTTTTTGGTAGCAAATTCACACTTTATAGCTCTCTAATTTCATGATTAAGGTTGTAAATCACCCCCCAAATATATAGAAATTCAAATACTTGGAGCCCAAGATCTTTCCTAATTTGCGATTTTTTATTTTTGGAAAGTTGGCGCCATGACCCTCCAGGGTAACACCGTGGCGCTTTCCATCATGGTTGCCTAACCCCTCGAGCCGTGTCATAGTGCCTTTCGGGCATAGTGATGCTCCTCGCACAACGCTGCACCATGACGCAGTACTCTTCAACTGCCTCAAAAACCTTGTTGCAATGCTCTTCGACTACCCCAAAAGCCTTGCTCTTGAGTTTTTGCGCCAAGGCAGTGCTGCCCTATTTTATGGTTTTTGCTCTTTTTCTTCATTTTTTCATCTAGTTTGGCCCAGTTTAGTTCTTTTGGCTTTCAAAACTTATTTTCTTCATAATTACCTAAAAACCACTAGCAAATACATCAAATCTAATAAAAACATACCTAAAACAGAGGCAAATAAATCATTTTTTAAGTGCTTTTCACCAACCCAAACCAAATGTTACGGTTTGGCTCATTACTTAATAAGGGTTATTTGAGTTGAAGAAACTTACAACTTGAACAAATGAGTTTGGTTGAATGAATTTTTAGACCCAATCCAACTCAACCCAACCTACAGACACCCCTACTAAACATATCATACTAGATCATAGGATCTAGACACCTTGAACTTTGAACTACATCTTTGCTTTGGCTTCTCTGTTTTTTACTATATGGCTAATATGTGGTTTAATTTTGTGTTTGCAGCCTTGCAGCTCTGTGTTGATGAGTCTTGTTGTGACCCTTCCATTATCTGTATTACCTGATCTAAGCTTTGATTGCCTTTGTAGTTGTAAAATGGGTCTTTTTACTTCAGCAGATCCAAGACTTCTGTCAATTTTTTTTTTTTTTCTTTTCTTTCTTTTTCTCTATCCTTCTTTGGGTGTGGTTTGATTTTGTGTGAACTTGGAAAGAAAATTGACTGGTGTCTAG

mRNA sequence

CTTCTCCCTTCTTCTTCAATACAACTAGAATCTTTCCTTTCATAAAGCTCTATTCACACCTCTCTCTCTCTCTCTCTCTTCTTTTCAAAAAACATGTCCAAAATAGTGATAAAAGAAAGAGACAGAATCCCAAAAATTAATTTATACCTACAAAAGGAGAAGAAAAAAAAAACCATAGTTTCTTGAGCCTTCTCATTAAGTATTGTGATTCATATACTCTGTTCTTCCTCTTCTTGTCTTGGCATATAAGCTTGTGTTGGATAGAAGATATGAGTGATCCCAAATATGCCTATCCCCATCCACCTCCTCAAGGAGGGTATTATCAAGGGCTGCCCCCTTGCAGCTCTGTGTTGATGAGTCTTGTTGTGACCCTTCCATTATCTGTATTACCTGATCTAAGCTTTGATTGCCTTTGTAGTTGTAAAATGGGTCTTTTTACTTCAGCAGATCCAAGACTTCTAAAATTGACTGGTGTCTAG

Coding sequence (CDS)

ATGAGTGATCCCAAATATGCCTATCCCCATCCACCTCCTCAAGGAGGGTATTATCAAGGGCTGCCCCCTTGCAGCTCTGTGTTGATGAGTCTTGTTGTGACCCTTCCATTATCTGTATTACCTGATCTAAGCTTTGATTGCCTTTGTAGTTGTAAAATGGGTCTTTTTACTTCAGCAGATCCAAGACTTCTAAAATTGACTGGTGTCTAG

Protein sequence

MSDPKYAYPHPPPQGGYYQGLPPCSSVLMSLVVTLPLSVLPDLSFDCLCSCKMGLFTSADPRLLKLTGV
Homology
The following BLAST results are available for this feature:
BLAST of CmUC09G176330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC09G176330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC09G176330.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC09G176330.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC09G176330CmUC09G176330gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC09G176330.1-exonCmUC09G176330.1-exon-CmU531Chr09:30600162..30600473exon
CmUC09G176330.1-exonCmUC09G176330.1-exon-CmU531Chr09:30600574..30600596exon
CmUC09G176330.1-exonCmUC09G176330.1-exon-CmU531Chr09:30603848..30603972exon
CmUC09G176330.1-exonCmUC09G176330.1-exon-CmU531Chr09:30604054..30604072exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC09G176330.1-five_prime_utrCmUC09G176330.1-five_prime_utr-CmU531Chr09:30600162..30600430five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC09G176330.1-cdsCmUC09G176330.1-cds-CmU531Chr09:30600431..30600473CDS
CmUC09G176330.1-cdsCmUC09G176330.1-cds-CmU531Chr09:30600574..30600596CDS
CmUC09G176330.1-cdsCmUC09G176330.1-cds-CmU531Chr09:30603848..30603972CDS
CmUC09G176330.1-cdsCmUC09G176330.1-cds-CmU531Chr09:30604054..30604072CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC09G176330.1CmUC09G176330.1-proteinpolypeptide