CmUC09G168050.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC09G168050.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 7581757 .. 7582092 (+)
Sequence length243
RNA-Seq ExpressionCmUC09G168050.1
SyntenyCmUC09G168050.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAATCACACAACCCAGATCTCCAATTCTCTTCTTGGATCAATGGGAATCAGTGTTTCATCAAGCTAAGCAAAACCCAGAAACGAAAATGGAAGAGATTGCAGCAGGAATGGAAGCTGCGCTAGAAATAGCAAAGGAAGCGAGTACACACTCGGTATTTTTTTCCTTTTTCCTTTTACGGTTGGTTGTTTCTTCGTAATGGGAAAGTGAAATGTGAAATTTTCTTGGTTTTGATGGATGAATGTAGGAGAAGAGAAGGCAGGGCATGTGCAATTGCGAGATTCGAAAATGGACCTTACGATCTTTCACGCGCTCCTTTGCGCCATTGTAA

mRNA sequence

ATGAACAAAATCACACAACCCAGATCTCCAATTCTCTTCTTGGATCAATGGGAATCAGTGTTTCATCAAGCTAAGCAAAACCCAGAAACGAAAATGGAAGAGATTGCAGCAGGAATGGAAGCTGCGCTAGAAATAGCAAAGGAAGCGAGTACACACTCGGAGAAGAGAAGGCAGGGCATGTGCAATTGCGAGATTCGAAAATGGACCTTACGATCTTTCACGCGCTCCTTTGCGCCATTGTAA

Coding sequence (CDS)

ATGAACAAAATCACACAACCCAGATCTCCAATTCTCTTCTTGGATCAATGGGAATCAGTGTTTCATCAAGCTAAGCAAAACCCAGAAACGAAAATGGAAGAGATTGCAGCAGGAATGGAAGCTGCGCTAGAAATAGCAAAGGAAGCGAGTACACACTCGGAGAAGAGAAGGCAGGGCATGTGCAATTGCGAGATTCGAAAATGGACCTTACGATCTTTCACGCGCTCCTTTGCGCCATTGTAA

Protein sequence

MNKITQPRSPILFLDQWESVFHQAKQNPETKMEEIAAGMEAALEIAKEASTHSEKRRQGMCNCEIRKWTLRSFTRSFAPL
Homology
[Close]
BLAST of CmUC09G168050.1 vs. NCBI nr
Match: KGN44650.1 (hypothetical protein Csa_016227 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 32 MEEIAAGMEAALEIAK----EASTHSEKRRQGMCNCEIRKWTLRSFTRSFAPL 81
          MEEIAA  EAALEIA+         SEK+ QGMC CEIRKWTLR FTRS APL
Sbjct: 1  MEEIAAEKEAALEIARMRVGNHKQQSEKKGQGMCGCEIRKWTLRFFTRSIAPL 53

[Close]
BLAST of CmUC09G168050.1 vs. ExPASy TrEMBL
Match: A0A0A0K4M9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G363040 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-08
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 32 MEEIAAGMEAALEIAK----EASTHSEKRRQGMCNCEIRKWTLRSFTRSFAPL 81
          MEEIAA  EAALEIA+         SEK+ QGMC CEIRKWTLR FTRS APL
Sbjct: 1  MEEIAAEKEAALEIARMRVGNHKQQSEKKGQGMCGCEIRKWTLRFFTRSIAPL 53

The following BLAST results are available for this feature:
BLAST of CmUC09G168050.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44650.11.9e-0767.92hypothetical protein Csa_016227 [Cucumis sativus][more]
BLAST of CmUC09G168050.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC09G168050.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4M99.0e-0867.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G363040 PE=4 SV=1[more]
BLAST of CmUC09G168050.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC09G168050CmUC09G168050gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC09G168050.1-exonCmUC09G168050.1-exon-CmU531Chr09:7581757..7581915exon
CmUC09G168050.1-exonCmUC09G168050.1-exon-CmU531Chr09:7582009..7582092exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC09G168050.1-cdsCmUC09G168050.1-cds-CmU531Chr09:7581757..7581915CDS
CmUC09G168050.1-cdsCmUC09G168050.1-cds-CmU531Chr09:7582009..7582092CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC09G168050.1CmUC09G168050.1-proteinpolypeptide