CmUC08G148460.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC08G148460.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr08: 17923495 .. 17923782 (-)
Sequence length288
RNA-Seq ExpressionCmUC08G148460.1
SyntenyCmUC08G148460.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCTGCTACAATTGTTGTTTTCTCCCTTCTTATTGCATTGCTCTTTCTAAATCTGCCATTGTCAAAATCTACTGCACAATACACAACTATTCATTTTCCATCTCCTTCTCCGCCAGCTCGTCCAGTTGCTCGTTTCTCTTCCATCGTACGGCCACCGCTACCAAAGAAGACGCCTAACCAATACACCGTCATGTTACCCCGGGGGCCGGTGCCGCCAGCAACAGATCCTAAACACCAATGGCCAAATGTATTCACCCGTAGATCAACTCCACCTCCTTTCTAA

mRNA sequence

ATGGGGTCTGCTACAATTGTTGTTTTCTCCCTTCTTATTGCATTGCTCTTTCTAAATCTGCCATTGTCAAAATCTACTGCACAATACACAACTATTCATTTTCCATCTCCTTCTCCGCCAGCTCGTCCAGTTGCTCGTTTCTCTTCCATCGTACGGCCACCGCTACCAAAGAAGACGCCTAACCAATACACCGTCATGTTACCCCGGGGGCCGGTGCCGCCAGCAACAGATCCTAAACACCAATGGCCAAATGTATTCACCCGTAGATCAACTCCACCTCCTTTCTAA

Coding sequence (CDS)

ATGGGGTCTGCTACAATTGTTGTTTTCTCCCTTCTTATTGCATTGCTCTTTCTAAATCTGCCATTGTCAAAATCTACTGCACAATACACAACTATTCATTTTCCATCTCCTTCTCCGCCAGCTCGTCCAGTTGCTCGTTTCTCTTCCATCGTACGGCCACCGCTACCAAAGAAGACGCCTAACCAATACACCGTCATGTTACCCCGGGGGCCGGTGCCGCCAGCAACAGATCCTAAACACCAATGGCCAAATGTATTCACCCGTAGATCAACTCCACCTCCTTTCTAA

Protein sequence

MGSATIVVFSLLIALLFLNLPLSKSTAQYTTIHFPSPSPPARPVARFSSIVRPPLPKKTPNQYTVMLPRGPVPPATDPKHQWPNVFTRRSTPPPF
Homology
The following BLAST results are available for this feature:
BLAST of CmUC08G148460.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC08G148460.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC08G148460.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC08G148460.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..95

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC08G148460CmUC08G148460gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC08G148460.1-exonCmUC08G148460.1-exon-CmU531Chr08:17923495..17923782exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC08G148460.1-cdsCmUC08G148460.1-cds-CmU531Chr08:17923495..17923782CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC08G148460.1CmUC08G148460.1-proteinpolypeptide