CmUC06G123540.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC06G123540.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr06: 27054476 .. 27054775 (+)
Sequence length	300
RNA-Seq Expression	CmUC06G123540.1
Synteny	CmUC06G123540.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACAAGGAAATTCAACCTTAAAAATAGAAACTTTACGGAGGCGGCGGCAAATTTGTAAATCAACGGCGAAATGGGCGGTGGTAAACGGCGGGAAGGAGGAGTGGTCGGAAAAGAGCACTGAAAGGAGGAGGCGTACGAACTGGGAAGGGGATGAAGGCGGCAGGCGCGGAATAGAAAGGAAAGCAGTTGCCGGCAGCGCACTAAATGAGAAAGCGGTCGCCGGCGGTGGAGAAGTGGCAGCGGACGTGGGTAGCCATTTTCAAGAATCTCTGTTTTTCAGTGCAAAAATCCAATGA

mRNA sequence

ATGGGACAAGGAAATTCAACCTTAAAAATAGAAACTTTACGGAGGCGGCGGCAAATTTGTAAATCAACGGCGAAATGGGCGGTGGTAAACGGCGGGAAGGAGGAGTGGTCGGAAAAGAGCACTGAAAGGAGGAGGCGTACGAACTGGGAAGGGGATGAAGGCGGCAGGCGCGGAATAGAAAGGAAAGCAGTTGCCGGCAGCGCACTAAATGAGAAAGCGGTCGCCGGCGGTGGAGAAGTGGCAGCGGACGTGGGTAGCCATTTTCAAGAATCTCTGTTTTTCAGTGCAAAAATCCAATGA

Coding sequence (CDS)

ATGGGACAAGGAAATTCAACCTTAAAAATAGAAACTTTACGGAGGCGGCGGCAAATTTGTAAATCAACGGCGAAATGGGCGGTGGTAAACGGCGGGAAGGAGGAGTGGTCGGAAAAGAGCACTGAAAGGAGGAGGCGTACGAACTGGGAAGGGGATGAAGGCGGCAGGCGCGGAATAGAAAGGAAAGCAGTTGCCGGCAGCGCACTAAATGAGAAAGCGGTCGCCGGCGGTGGAGAAGTGGCAGCGGACGTGGGTAGCCATTTTCAAGAATCTCTGTTTTTCAGTGCAAAAATCCAATGA

Protein sequence

MGQGNSTLKIETLRRRRQICKSTAKWAVVNGGKEEWSEKSTERRRRTNWEGDEGGRRGIERKAVAGSALNEKAVAGGGEVAADVGSHFQESLFFSAKIQ

Homology

The following BLAST results are available for this feature:

BLAST of CmUC06G123540.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G123540.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G123540.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G123540.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC06G123540	CmUC06G123540	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G123540.1-exon	CmUC06G123540.1-exon-CmU531Chr06:27054476..27054775	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC06G123540.1-cds	CmUC06G123540.1-cds-CmU531Chr06:27054476..27054775	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC06G123540.1	CmUC06G123540.1-protein	polypeptide