CmUC06G110460.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC06G110460.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionmajor pollen allergen Ole e 6-like
LocationCmU531Chr06: 2552278 .. 2561434 (-)
Sequence length627
RNA-Seq ExpressionCmUC06G110460.1
SyntenyCmUC06G110460.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTGCATTTTGGTGGTGGCTGCTTTGCAGTTTTCCACTGCCAATGCAGAGGAAAAGGAGGACAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGACAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGGTACTCTCTCTTTTCCCTTTAATAATGTTATTATTAAAAGTATTGATATACTTAAATTTAAGTTTTTGAGTCAATCAAACTTGGTATCATAGTAGGAAGTCTAGTGTTCAAACATTGTAATATCGTTTTCCTCCCCAAAATTAACATTGATTTTTCACTTGATGAGTCTTCTACAAATTTTTAAACCCATAAGAAGGGAGGGTAAGATTTGGGCAAATCGGTTATTTAACACAGTACAAACCCATGCTTTGTTGGGTCTCTTACAAATTTTCATGCCTACAAGTTAGGGGAAGTGTGTTAAAATATCGATATAATATTAAATTTATCTTAACTCACAAGTTTAAGCTTTTGAATCAAAAGGGATTGCGCATTTTTAACGACGAATTTGAAACTTGTTGTATTTGTTTTGCAGATAAGCTCCAGATCAACATAGCACATTGAGCAATGGAGGATAAAAGAAAATAAGTGCCCTTGAGAAAATTTATCAGATTTATGTCAACAATTCTTACCATGTATTAGTATATTGAAATAATGTAGTTTGAGAGGGAGTTGATAAAGTTCCCTTTTTCCCTTTTTTTCTCTTTAATGAACTTTTTCCTCTTTCTTTTATAATAATGTGATTGAATATTTCAATTTTATAAAGTTCTAATGGGATTGTGAATGAACCATTTTTCACCATTATGTATTTATTATACAACAAAGATTAAAAAAAAAAAAATTTACCAAATATTTGTGGATTGGTTTCTTTTGTTAGTTATGATAGCGTATGGTAGATTAGTAATCTTACTCTAGAGTATATTAATGATGTATTAATGATGAAGTGTTTCAATATATCAGCATTCACTCAAAATGCAATTTGTGAGTATATCCACACTTATTTAACATTCATTTAAACAACAGTATGCCAATACTCATTCAAAATATAATTGGTAGTATATCATAAAGACAATTATCTAATTAGCTAGTATCATAGTTAAGTGATACTAATAAATATGTCAATAAGCTAATATAAATTCTCAATATATACTTCATTAATCTATATTAAACATACATCGAAAAACATGTGTGATTTCCTTTTCCCTTGATGCCTTGATGTTTTTTAAGGGTTTAAGAACATTCTGGACATTTCAAAACTTTTGTTTGAGCTTTGAACAATTTTTTATTTTTATTTTTATTTTTATTTTTTTGCTATAGTTGCAAAGAATAAAAAATATAGATACACTTGCAATTTCTAATTTTATTTTATTTTTTGGTTAAACCCGCAAACCCCTTTTTTTTCATTGCTCAATTAAAATTGGAGGGTTTAAAATAAAAATACAATCAAAATTTTCTCTGATAAAATCTTTTAAATAAATTAAATATAAACTATCTAATTATCTTAACTAAAGTAAAAATAAATAAATAAACTTAGTCAAAACAATGCTCTAAGTTTTCAACGTGGATATATTTTGTTGGATTTTTCTTATATTATTATTTTCTACTTTCTAAGTTTAATTAACTAGTTGAAACAATAATAATTAACTAGTGTTGTTAAGGAAATTAAAAGGAAAGAGAAAAAAAAACGAATGGAAATAATGAAAAATTTGGGAGTGTAATTAGTTCAATTTATAAATAATTTCGATTTGAGAAAATCATATTTTAGTTAGTTAAAAAGAAAAAAAAAGAAAAAAAAAGAAAAAAGCTGAAACCAAAATTTTATTTTTAACGTTAGTTTGAAATCTTCTTGAATTGGTTAATCTTCATAAATTTAAATACATTAATTTTAATGCGATGATCAATTAAAAACCAAACGTTTAACAGCTAAAAATCAAAACTAACTAAAGGTGGTTAAAAAACATATATAATGATAATATTATTTTGAAATAAATAATTCTTTTAATATCGAAAAAAAGAGATTAGAAAAAAAAAAACAGAAAATGGATCAAAAAGTTTTCTCCTTAAACCCCTTTTACTACGATTAAATACTTAATAGATTTTATTAATATAGAGATCAAAATCAAGCATTTTCTAAACATGCGACTTGATTGTTTAATCTTGAAACTTAGAAACTAATTTGATATAAACTTTGAATCTCAAGAACCAAAAGTGTAACATATCATTTTTTATATGCTATGGAAGTTAATTTTAAAAAAGTACCTACCAAGGAAAGTATACATAATTTAAGTTACATAAACACTAGGAACCTTTTTTTTTCTTTTTTCTTTTTAGGGGTCGTTATTTACTAAAAATAAAGGATGTTTGGGAATAGAATGCTTGAAAATAAGAGGTCTAAAAATTAAAGATGACAATATTTAGTTGGACATGAAAAATATTATCATAATTTGATGAACAACGCAATTGAGCTACATTAAGTTATGTTATGTTAATGATTGTGTTATAGTCAGTGAATAATTTAATGAAAATATTAATTTTCCTTATGAAATTCATTAGATACCCTTCATCATAATTAGCAGCAGTACTCAATAAAAGAAATTTTATTTTCCTCAATTTGTTTTTCTATTGCTAGTTCAATAATGTTTGTTATGAATGCATGGCATACAATTCTTGTTCTAATTAACAACACACCATATTTTATGGGGCTAATTTTTGTAATAGACAATCCATTTTTAGGTATTCGGTATTGATCTAAATTTAGGTTTACTAAATGTCTTGATATAAAAAGACTTCTCATCTTTCCAGAACTTCATCCACTCACAAAAGCAAGACTTGAAACATCACCAAAGGCAAGAACACAGCAAAGAACAATGGGGAAGAAGATGATGATTGCAGTGTTATTGATGTGCATTGTGGTTGTAGCCATTGCCAATAAGGAGGAGGTGGAAAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGTTATGAAACTTGTGAGAAGGAATGCCTTCAAACTGGCAATGGCCAAAGCTTTTGTGAAGTCAAATGCGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCTCTCTTCTCTTCTCTTCTCTTCTCTTCGTCTTTCTTCTAATAACATTGATACCATAATGCATTAACATTTCTATTCCATCATTAAAACATATTCCACAATTTATTCTATTTGAGTTTCATTTTCTCATGTCAATTTAAATTGTTTGTGTTTGTTTTACAGATAAGTTAAACATCGAATTACATTGAAGAATGAGGAACAAAAGGAAAGAAGATCTCCTGATAATGATGAAGTAGTAATATTATTGTATGAAAATCGAGCTTGTAATGTGATTTTAATATTAAAATTTATAAAGCTCTTGGTCTTTGGTGTTAATTATGATCTGTGAATCGACCATTGTCATGTGGTGGGTGTTATCTTTACTAGAAAAAAAAATATATATATATATAATTATAATTTCCTATAAATTGTTGATCAACCCCTATACCCATTTGCATTTTGTTTAATCTTTATTCTAATTTATATATATGATCACAAAATTCAATTGATCATAGTTTAAATGTTCTTATGTAATAGAATATGGAAATGGGAGAAAATCTTTCACACCAAGTTAGACTACACACTTGAAAAATCCCAACTGGGACAGTATAGAAAAATGAAGAGTTCTCATGCAAGAGCTTTAGTTAATGTATTGATGATAAGAATGAACCTGTAAGAGCTTAAAAAAGTCATCGGCTACTTTATCACGAACAAAATGACAATCAAACTCAATCCGCGATGAATTCAAGAATTTTATATAGAAAATGTAAAATTATAAAGAGACATAAATCAATATACATTGCTTCATATGTTAACTAATTTAATATCCTCTACAAACTTTCATGTTTTGGACTATTGGAAGCGGAAAGCAACAAGAGACTATCTAAAACCTTGGAATACTATTGCCGAGAAGCTTGCTTCATTCTGTATATCGACTTTTTTAGCTTACAAACAAGCTTGGCTCTTGTGGGAAAGACGGCTTGAGGCTTATACCCAAAAGACAAATCCATATAGACATTTTCAAATAACTCATCATGAAGAAAAACATTATTGACATCAAGTTGTAGGAGAGGGCAATGCAATTATAAGAGACAATAACCATCACAAGGAGAACATGAACAGTGACTAATTTAGGAATTGGTGAAAAAGTTTCGTTTATATCTTTTGATCGTACCATTTGCAGAGCATATTGTGTTTGGTTGAAGATATTGGCAGAACATCCCAAGCATAGTTATTTGTCCATAGCCTTAAGTTCAAGGCCCATGGTTTCATCATCATCCTTATTTTGAGGGATTGGTCGTGAGGTAGAAACAATATCTGCAACCTGTAGGTGAAATAAGAAGAGGAATATTAATAGTGAATTCTGTGGAGTTAGAGAGAAGATTGAGAAGAATTTGATGGGAAATTGTCTGATAAACTCCAATATTAACGTCAATTTGTTAAATAGTTTTTTTCGGTCGAAATTGACCACCGAGATTTGAATAAAAATTAACTTTTTCATCTTATCAATTGTTTTGGGCTTTCTTGTGAAATCTCGACCGGGATGAACACCGAGATTCTCCTACTATTTTCAAATATTATGTAATTTTCCTAAATCTTATACCAAATCTTATATCTTTACAAATTTTCTTTAAATTTTGTTATCTTTACTAAATCTTGTATTAAAATTTTCAAATCTTTCGCCCAATTTCTACTTCAATCATCCAAATTTTTGCAAATTTTCAAATGGATTTACCAATTATGATTTTCCTCATGGATCTTGGATTTTTAAATTTTGGGAAAGATCAAATTTTGCAAAAGATTTGGTATGATTTTGGGAAATATATAGAATCTCAGTAATCATGCGCAAGATTTCCTGGGAAAGTCTAAATATATAGAATATCAGTGTCAATATGCCCAAAATTTCACTGAGAAAGACTAGAACAATCAATAAGATGAAAAAGTTAATTTTTTTTATCGGTTGAAATGCCCCGAGAAAAACTCTTTTATCGAGTTTTGAAGAAGCATGCTATTTCCAAAATATGAAAACTTGAAAGGGCTACTTTTGACAATTTCTTAAATTTTATGGTAAGAAGGCCGAATGTTATAGTTGAAGGAAATGAACTCTTCATCCCACGACAGAAGCTTTGGATCACATTAATTTTACTTAGAATCAAACGAAAATAAAATAAAGATTAAGCATTTGTATACCCCATATTTACAGAAAATTTTTTTGCGATTCTTTAGGTCTATTGTTCTCAATCTAAAACACAACCAAAAGGTTTCAATCTCCACAAAATTTTTCTCGCTATGACTCAAACACGGAACAAAGACTCGTGGGAGACTTTCAAAGATGAGGAAATCTGAAGATTTTACATACAATTCTTCTCTAGGAATTTGGGAGAATTGCATACAACTCTTCCTTGCAAAACAATAATCATTATATCTTCTTATAACAAAAACTTTAAGGTCCTATTTATAATGACATAGAGCATAATTTATCTAAATTAAAACTATTTTAATATAGATAATACAAAAATAATAATAATTTTTAAAATATAATTAAAGCTTATTCAATTATCAAATTCTGCTCCAACATATTTTAATCATATTCAAACTATATGTTTTTTTATACTATAAATAATTTCATTTCAAATTTCATATTTCAAATACATTAAATATATTTTTCCTTTTTTAATATATCAAATATATTAAAATCAATTTAAACACTTCAAAATTTCTTTCAACTAAATTGATCTCTATTTATGTTCGTATAAGTTAGCAAGTAGACCTTATGGACCTACAAATTATAAGCTCCAATGAGACAAATTTACTTAATTAAATTCTTTATAATTAATCAATTTTCATTCATTAACTATAGGTTACTCTACTATAGATTTAGAGTTGCACTCTTATGCACTACAAGACAAGTTTTGTTCATGAATATAATCATTACAAGCAAGTCGACTCTTCACGAACTGTTTGTAATTACAGCTAGATCCAATGTTCGTTTTACCCTGTAACAATGACCTTTTGCAACTTAAGTCTACCCCTTAGTCTCTAATGAACAATATGTTTTTACCAAATCGGTTTGTAAGAAGACTGGGAGGGAAAGAGACCAAATCGAAGAGGGAAACTAAAGGCAAACGACATTATTTTTACCCTTCTTTCTAAATTAAACACAGAGTCAACGATAAGGCATTAGTAGACGAGCAAAAATTGTAAACACAGTGAAAAACTAGAAATTATAATAACACGATGGAAACTTACAGAATTAATGTCAACAAAAGTATATATGTTGACAATTTGACACGTCAACTTAAATACAAACTTATATTAATTTTATGGGCGTCAATATATATGTTTTTCAATTAATAATTTATTTTAAGGTGTAAATAAAAGTTCTATTGACAGTTTTTGGTCAAGCGTCAACTTAAAAAAAAAATAAATAAATAAATAAAATACATGCATCAATAGAGGCCAAAGTTGTAGTAGTGTTTTAAAAACTATCACGTCAACTTATGTTAAATACTTAACAAATTATGTTAATAGAGGAACTAAAATCAAGTATTTTCTAAATGTTGGAGATTTGACGGATCCAATTTTGAAACATATGGACTAATTGGACATAAACCTTAAATCTCAAATGACTAAAAATGTAATTTACAAGATATATCTAATATGGAAGTTTGTCGGATGAAATTCATCACATGAAAAGTATACTTTAACAAAAGGGGAACTTTTGATTTTTTCTTTCTTTTTTTCTTTTTTAAATTTAATTACAATAGTTAAGCTATGAGTAAAGTAGATTAAATAGAAACTATCAAGAATTGTGTATAAAATTGTAAATTACAATCCAATGCGAGTTAAGTTAAAAATTTTTATGTTAGACCCTTTCAAAAAGGAGTATGAACATATTTGAATCCCTATTTTTCACAATTGTTTAATAGTTTAATTTTTCTACCAAAAATTTCAAATCAAATTCTTCTTGGTTACAATAATTGTCATTTTGAAGAAAATTTTTGTTGTCATTTAGGATTTTGTTGAAAAATAGTTTCCTTGGAAGATGACTTGGAATACTTCCAACTTGCACTAGACTGGAGATCCTTCTTTCAAAGAAATTTCAATTAAGTAAAAGAGAACTCAGTCGATCACTGAAGCTAAGGAACGGGGAGATGACTTAGGATCGGTTGTTGTTTTCTCTCATGTTCATGTTCGTTGTAGTAAGAACGTGATAACCCACTTTGTTATGTATAAAGCTTTGGAGGAATCGGGTGTCTACCATTCTCCAGACTCTTTATCTTGAGTGGTTTACACTTCTAGTTGTTTATAATAATAATTAAAAAATAATAATAATAATAATAGTAGTAGTACATAATAGTAGTAGATATGTATCCATAATCATAATCGTTAGGTGACACTTAATATAATTGGAGAAAGGAAATTTAGTTATATTATACTAGTCTATACCATGTAGAATGTTTGTTATAAATGAATGGCAAATAATTAATATTCAGTTATGGGAAATCTCATACTTTAATTTTAGGCCATGTTGTAATTGAGATCTAAATTTAGGTTTATTAGAATAGCCTATAAAAGAGTTTCTCATGTTTTTGAAAACATCCATCCACTCACAAAAGGGAGCACTATAAAAAGGCAAGAAAAAAGAAAAATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCACCTCTCTCTTTTTCCAATAACTTATCATTTCTTTACATATAAATTCGAGAGTTTCCACGTTTAATTATATGAGTTGTTTTCAAACTATCGTAAAATAAGTCGAAATATTTATAAATATAACAAAATATCATATTATTTGAGATGATACTGTCTATTAATAACATTTTGCCATATTTATAAATATTTTGAGTAATTTTTTCATTTTAAACAATTATTCCAATTATATAATCATTAAAAATTTGATATTATATAATAAAAATACAGAAACTTACAATTTGTTTAAAATTTTTCTTAAATGGGCGTATTTGGTTAGAAATCTAGATTTATGTTTTTAGTGTATTCACTCAGATTTTAAGATGAAAAATTGTAAAAATTTTAAAATAAAAAATAAAATCTAGTATTTTAGGTTATAAACTCAAATCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAATTAATATATGTATCAGGTATTTTATTATAAATTATATAATAATACAAAATAATAAGAAAAATTATTATAGATATAGAAAAAAATATCAAACTATTTACAAATATTATAACAAAATTTTACTTTCTATATGTGAAAATTTTACATTTTACGTGTGATAAACCGTTTATCACTATAGATGATAGAAAGTAAAATTTTGTTATATTTGTAATATTTTCAATAGTTTTTCTATTTTTGAAACATCTCAAATAATAATCATTCAATTTTTTTTTTTTTGAAATATTACTAAAGGTCGAGGGATCAGTAGGCACACCTAGATATCTCAACTAGGTTGACACATTCTTAGTGCTCTCATCACGTCCCGACCCAAAAAGATATATTGATATGGAAATAGAGAATGTACACAAAGATTTAATTAAGATATTCATAAATCAATTAATAATACTTTATACTATATTTAAAATTTAGTGGATAATTAGGACTAATTAAAAAATAATTATTTAATTTAGCCAAACATATCTATGAAAAACATGAAATAGAATTCTTTGTTTGAAAACTAATAAATAATTACTATCTCATATTAACTAAATTGTTGGGTTTGTTTTACAGATAAGCTGCACATCAACTTGCCTTGA

mRNA sequence

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTGCATTTTGGTGGTGGCTGCTTTGCAGTTTTCCACTGCCAATGCAGAGGAAAAGGAGGACAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGACAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGTGTTATTGATGTGCATTGTGGTTGTAGCCATTGCCAATAAGGAGGAGGTGGAAAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGTTATGAAACTTGTGAGAAGGAATGCCTTCAAACTGGCAATGGCCAAAGCTTTTGTGAAGTCAAATGCGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCTCTCTTCTCTTCTCTTCTCTTCTCTTCAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGATAAGCTGCACATCAACTTGCCTTGA

Coding sequence (CDS)

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTGCATTTTGGTGGTGGCTGCTTTGCAGTTTTCCACTGCCAATGCAGAGGAAAAGGAGGACAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGACAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGTGTTATTGATGTGCATTGTGGTTGTAGCCATTGCCAATAAGGAGGAGGTGGAAAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGTTATGAAACTTGTGAGAAGGAATGCCTTCAAACTGGCAATGGCCAAAGCTTTTGTGAAGTCAAATGCGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCTCTCTTCTCTTCTCTTCTCTTCTCTTCAGGAGAAAGTGGACAAATATGAAGCCAAATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAACAAACTGCTGATAAGCTGCACATCAACTTGCCTTGA

Protein sequence

MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVAVLLMCIVVVAIANKEEVEKYEAKFDAKYKSCYETCEKECLQTGNGQSFCEVKCDEDCDEKQTAGTLSSLLFSSLQEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTADKLHINLP
Homology
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BLAST of CmUC06G110460.1 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-26
Identity = 66/76 (86.84%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKMIAVFLMCI+V+AALQF+TAN  E+  KYEAKFDAKYKSCYETCEKECLE GNGQS
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTAN--EEVAKYEAKFDAKYKSCYETCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCDEKEVA 77
          FCEVKCDEDCDEKE A
Sbjct: 61 FCEVKCDEDCDEKETA 74

[Close]
BLAST of CmUC06G110460.1 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-26
Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKM+AVFLMCI+VVAALQF+TAN E++  KYEAKFDAKYKSCYETCEKECL +G+GQS
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLANGSGQS 60

Query: 61 FCEVKCDEDCDEKEVA 77
          FCEVKCDEDCDEKEVA
Sbjct: 61 FCEVKCDEDCDEKEVA 75

[Close]
BLAST of CmUC06G110460.1 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 8.0e-26
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKMIAVF MCI+V+AALQF+TAN  E+ DKYEAKFDAKYKSCYETCEKECLE+G+GQ+
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATAN--EEVDKYEAKFDAKYKSCYETCEKECLENGSGQT 60

Query: 61 FCEVKCDEDCDEKEVA 77
          FCEVKCDEDCDEKE A
Sbjct: 61 FCEVKCDEDCDEKEKA 74

[Close]
BLAST of CmUC06G110460.1 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-25
Identity = 61/76 (80.26%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKMIA+FLMCI+VVAALQF++AN E++  KYEAKFDAKYKSC++TCEKECLE+G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVA 77
          +CEVKCDEDC+EKEVA
Sbjct: 61 YCEVKCDEDCNEKEVA 76

[Close]
BLAST of CmUC06G110460.1 vs. NCBI nr
Match: XP_016902456.1 (PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-25
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 1   MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQ 60
           MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQ
Sbjct: 584 MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 643

Query: 61  SFCEVKCDEDCDEKEVA 77
           SFCEVKCDEDCDEKEVA
Sbjct: 644 SFCEVKCDEDCDEKEVA 660

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-08
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 162 EAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTADKL 204
           EA++K CY TC KEC   GNG +FCE+KCD DC  K   +KL
Sbjct: 2   EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 6.6e-26
Identity = 61/76 (80.26%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKMIA+FLMCI+VVAALQF++AN E++  KYEAKFDAKYKSC++TCEKECLE+G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVA 77
          +CEVKCDEDC+EKEVA
Sbjct: 61 YCEVKCDEDCNEKEVA 76

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 6.6e-26
Identity = 61/76 (80.26%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQS 60
          MAKKMIA+FLMCI+VVAALQF++AN E++  KYEAKFDAKYKSC++TCEKECLE+G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVA 77
          +CEVKCDEDC+EKEVA
Sbjct: 61 YCEVKCDEDCNEKEVA 76

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match: A0A5D3DM52 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002640 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.6e-26
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQ 60
          MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQ
Sbjct: 1  MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVA 77
          SFCEVKCDEDCDEKEVA
Sbjct: 61 SFCEVKCDEDCDEKEVA 77

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match: A0A1S4E2K0 (carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=CCD7 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.6e-26
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 1   MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQ 60
           MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQ
Sbjct: 584 MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 643

Query: 61  SFCEVKCDEDCDEKEVA 77
           SFCEVKCDEDCDEKEVA
Sbjct: 644 SFCEVKCDEDCDEKEVA 660

[Close]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 0 

Query: 1  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQ 60
          MAKKM+AVFLMCI++VA LQF+ A  E++  KYEAKFDAKYKSCYETCEKECL+ G NGQ
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVAVLLM 81
          SFCEVKCDEDC EKE A +L+
Sbjct: 61 SFCEVKCDEDCSEKEAAGILL 81

The following BLAST results are available for this feature:
BLAST of CmUC06G110460.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906682.12.1e-2686.84major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038891517.13.6e-2685.53major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038875643.18.0e-2684.21major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol... [more]
XP_008456958.11.4e-2580.26PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major... [more]
XP_016902456.11.8e-2580.52PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis ... [more]
BLAST of CmUC06G110460.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O241727.8e-0857.14Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BCS26.6e-2680.26Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5306.6e-2680.26major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A5D3DM528.6e-2680.52Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S4E2K08.6e-2680.52carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 OS=Cucumis melo OX=3... [more]
A0A5A7TDR12.8e-2475.31Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of CmUC06G110460.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 168..204
e-value: 4.8E-12
score: 45.6
coord: 44..75
e-value: 1.1E-12
score: 47.7
coord: 107..144
e-value: 3.6E-13
score: 49.2
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..76
coord: 75..142
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 147..207
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 101..145
e-value: 6.4E-15
score: 56.4
coord: 38..81
e-value: 1.9E-14
score: 54.9
coord: 162..206
e-value: 3.1E-15
score: 57.4
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 38..76
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 101..138
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 162..203
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..76
coord: 75..142
coord: 147..207

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC06G110460CmUC06G110460gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC06G110460.1-exonCmUC06G110460.1-exon-CmU531Chr06:2552278..2552303exon
CmUC06G110460.1-exonCmUC06G110460.1-exon-CmU531Chr06:2553382..2553531exon
CmUC06G110460.1-exonCmUC06G110460.1-exon-CmU531Chr06:2558215..2558436exon
CmUC06G110460.1-exonCmUC06G110460.1-exon-CmU531Chr06:2561206..2561434exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC06G110460.1-cdsCmUC06G110460.1-cds-CmU531Chr06:2552278..2552303CDS
CmUC06G110460.1-cdsCmUC06G110460.1-cds-CmU531Chr06:2553382..2553531CDS
CmUC06G110460.1-cdsCmUC06G110460.1-cds-CmU531Chr06:2558215..2558436CDS
CmUC06G110460.1-cdsCmUC06G110460.1-cds-CmU531Chr06:2561206..2561434CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC06G110460.1CmUC06G110460.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016121 carotene catabolic process
biological_process GO:0009733 response to auxin
biological_process GO:0010223 secondary shoot formation
biological_process GO:1901601 strigolactone biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen