CmUC05G087710.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC05G087710.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 6368989 .. 6370101 (+)
Sequence length237
RNA-Seq ExpressionCmUC05G087710.1
SyntenyCmUC05G087710.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCATCCGCTTACTACCTTCTTTGTCTATATTTGCCTGTTAAAATGATAGCTCGTGGATTTGATTGCATAGCTCTGTAAGGGACATGCCTCGGCACCATATATTGAGTTTTGGTATGGACTTAGCTTTTACGATAAAACATGTTTCTAGAGCACTTATTTCCTGCCAACTGAAGTTTCTTGGTTGAAGAATGATACTTCCATCATTTGTTTTCCTCCATTATCTGTTTCATAGTTTATGGTGCACAGGATTATGATGTTTCTTGGAAAGCTAGCACGCGACTCTGAATTCATATTGCCACTTGACTTTTGTTATTTCAGTATTGCATTATTTTCTTTATACTGGAAAGCTTGTTACTTCTTGGAAAGCTGGCGAATGGCCATACGGGATGCTAATTAGAGTATTGTAGAACTCGCAAGCTTATGAAATTGATTTCTTAGATGAAATTTACCAAATCTTGACTTGACGACTAACTAGTAACTACTTAAGACATTTGTGTCCTATCCAATAAATTTCATAATTCTAATTGTTGGATTATCAGTTAATAGATCTATTGAGTTAGTCAAATTGTGCATCACTTTATTAAAAATAGTAAACATAAATTTTGTTAGAATATTGTACAAATGATTCTACTTTTTGGGAAGGTTAGATTATAATGAAAGGAGAAACGTGTGTTTAAACTTTTAAAAATTAAAGAATCAGATGAATTTGTCTCAAATTTCTTTGATTGAGTTTGCTAACTATGGTTTTTTTCTAGCTGTTTGTAATTTCTAGTTCCAGTTATATAGTTTTTAAATTAGTCCTTTAGTTTTAAAGTTTTTTTTTTTATTTTTTTTATTATTATTCTTTTTTTTTAGACTTTGAATGGAAAATTGAGCTTTGTGTCTGGTGACCTTGCCAAAGGTAAAGAGGCCCAGTAGTTCTGCTGTTGAGGGGAAGACAAGGAACCCGTTATGACAAAATGTGGGTGCCATTGGAGACTTTGAACTTCTGCACTGTGAGTATGATACTCGATAATTGTTCTTATAGCGTGTTATTTCTGTAACAGAATTGTTGATAAGATGTTTCCCATCAAGATTTATTGTTGCCCAACACATGCTAATGCATGA

mRNA sequence

ATGTTTGCATCCGCTTACTACCTTCTTTGTCTATATTTGCCTGTTAAAATGATAGCTCGTGGATTTGATTGCATAGCTCTGTTAGATTATAATGAAAGGAGAAACCTGTTTACTTTGAATGGAAAATTGAGCTTTGTGTCTGGTGACCTTGCCAAAGCGTGTTATTTCTGTAACAGAATTGTTGATAAGATGTTTCCCATCAAGATTTATTGTTGCCCAACACATGCTAATGCATGA

Coding sequence (CDS)

ATGTTTGCATCCGCTTACTACCTTCTTTGTCTATATTTGCCTGTTAAAATGATAGCTCGTGGATTTGATTGCATAGCTCTGTTAGATTATAATGAAAGGAGAAACCTGTTTACTTTGAATGGAAAATTGAGCTTTGTGTCTGGTGACCTTGCCAAAGCGTGTTATTTCTGTAACAGAATTGTTGATAAGATGTTTCCCATCAAGATTTATTGTTGCCCAACACATGCTAATGCATGA

Protein sequence

MFASAYYLLCLYLPVKMIARGFDCIALLDYNERRNLFTLNGKLSFVSGDLAKACYFCNRIVDKMFPIKIYCCPTHANA
Homology
The following BLAST results are available for this feature:
BLAST of CmUC05G087710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC05G087710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC05G087710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC05G087710.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC05G087710CmUC05G087710gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC05G087710.1-exonCmUC05G087710.1-exon-CmU531Chr05:6368989..6369068exon
CmUC05G087710.1-exonCmUC05G087710.1-exon-CmU531Chr05:6369637..6369661exon
CmUC05G087710.1-exonCmUC05G087710.1-exon-CmU531Chr05:6369750..6369755exon
CmUC05G087710.1-exonCmUC05G087710.1-exon-CmU531Chr05:6369850..6369895exon
CmUC05G087710.1-exonCmUC05G087710.1-exon-CmU531Chr05:6370022..6370101exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC05G087710.1-cdsCmUC05G087710.1-cds-CmU531Chr05:6368989..6369068CDS
CmUC05G087710.1-cdsCmUC05G087710.1-cds-CmU531Chr05:6369637..6369661CDS
CmUC05G087710.1-cdsCmUC05G087710.1-cds-CmU531Chr05:6369750..6369755CDS
CmUC05G087710.1-cdsCmUC05G087710.1-cds-CmU531Chr05:6369850..6369895CDS
CmUC05G087710.1-cdsCmUC05G087710.1-cds-CmU531Chr05:6370022..6370101CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC05G087710.1CmUC05G087710.1-proteinpolypeptide