CmUC04G079910.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAGTCTCTCCGCTTCTCTTCCCTTTCACTCTGTCCTCCTCTTCTCGCCGCACCTTCTTCCGATTTGAAGAACCGCCGTCCGGTACTTGGTGCAGCGCTTGACGCACACAAGAAGCAATTCCTGGTATGATTTAGATTTATCGCCCCACTGCTCTCCTCGATTCTTGCAAGCTCATAACGATTCCTCGTGGTTTCTTTAATTTTTCTATCGATCTTGATATTTTCTTTACTTCCAATGCTTCCTTTGTAACTTTGCCTTTGTGGATCTTCTGTGTATGTAGAGATTTGGACCGAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGTTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCGACCAACCATTCCGTTGGTGGATCTTCCGGTTGGGATCTCAATTCCAACATCCTGGCTTGGTCTGCGACCACCACGTTCCAAGTCGGTGACTATCTCGGTTCGTTCATTTCTCCTCTGTTTCTCCTAAAACACATCTTCAATTAAGTTTCTATGTCGTATACTTTGATCTTTGCTAAGTTCTCTGTTCGATCATCATTGTGAATTGAAGAATCTTGATTTTCATGCCTTTTCTTCTTGAATTATTTACCTTCCAAGTTCCAACTATTGCTTGCACTGACATTCTTGTATTGTAATCTATAACTGATCACTTGAATTCGTATGATTCTGCACTGTCTCATTCCAATTCTCTTCTATTTTACATTTGTAAATACAAAATACAGTCGTTCTTTAATAGTGACTGTAATCCAATTTATTCGATTGTTTCTCACTGTTAGGGCAACTGCATGACTCTGTTTCTTGAATCAATCAATCCACATTTCTTGCATATATTTAAAATCAGAAACAAACATTAAATTGATTTTAACCATTTCAAGATGACTCTGATGAGTTGTCTTTAGTTAAATTTTGGTTGGTGTGGTACAGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGACTTCTTCAATTGCCGCACCGTGAACCCAATCAGCACTCACAGTGACGGGGAGACAGTGATCCGCCTGAACCAACTAGGCAGTCGCTACTTCATATGTGGCCGCCCTCAACACTGCCTCATGGGTCTCAAGCTCCGAGTGCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCATGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCACCCTCCTCGTTCTCCTCCCTCCCCACCCTCTTCTCCACCCATTGAACGCCCACCAATGCCCGACCTTCCGGTGGCGCCATCGCCTTGCATTTGTTCCGGGGTGGGCGAGATGATGATGAAAAATGGCTCAATGAACTGGTATTTCGTGTTGCTCTTGATTATGCTTACTTCCATTCCTTGATTCCATAGCTTTTGCTTCTCTTTCTCCACTCCCAATGCTTAAACGCACTCAGGGTTTGTACTCCTCGGAAACTCTTGTGCAATTTACGGCCACACATGGCGATAGATAGATATATAGAGATAGCCCTTTTCCCCTTTTTTGGACTGACTGATATGTTGTAGGTTTCTCGAGTAAATTTTGTGAAATGTGAATGAGATAAAATGACTTTTGGTTTGGAGCCAGACGTGCATTTTTCAGTTTTGAGAAACATGCTGCCTAATTTTAGATCCGAGAGTTATTAAGAAGCCAAG CTGAGTCTCTCCGCTTCTCTTCCCTTTCACTCTGTCCTCCTCTTCTCGCCGCACCTTCTTCCGATTTGAAGAACCGCCGTCCGGTACTTGGTGCAGCGCTTGACGCACACAAGAAGCAATTCCTGAGATTTGGACCGAAATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGTTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCGACCAACCATTCCGTTGGTGGATCTTCCGGTTGGGATCTCAATTCCAACATCCTGGCTTGGTCTGCGACCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGACTTCTTCAATTGCCGCACCGTGAACCCAATCAGCACTCACAGTGACGGGGAGACAGTGATCCGCCTGAACCAACTAGGCAGTCGCTACTTCATATGTGGCCGCCCTCAACACTGCCTCATGGGTCTCAAGCTCCGAGTGCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCATGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCACCCTCCTCGTTCTCCTCCCTCCCCACCCTCTTCTCCACCCATTGAACGCCCACCAATGCCCGACCTTCCGGTGGCGCCATCGCCTTGCATTTGTTCCGGGGTGGGCGAGATGATGATGAAAAATGGCTCAATGAACTGGTATTTCGTGTTGCTCTTGATTATGCTTACTTCCATTCCTTGATTCCATAGCTTTTGCTTCTCTTTCTCCACTCCCAATGCTTAAACGCACTCAGGGTTTGTACTCCTCGGAAACTCTTGTGCAATTTACGGCCACACATGGCGATAGATAGATATATAGAGATAGCCCTTTTCCCCTTTTTTGGACTGACTGATATGTTGTAGGTTTCTCGAGTAAATTTTGTGAAATGTGAATGAGATAAAATGACTTTTGGTTTGGAGCCAGACGTGCATTTTTCAGTTTTGAGAAACATGCTGCCTAATTTTAGATCCGAGAGTTATTAAGAAGCCAAG ATGGAGGCACCGAGACCGGGCTGGGCAGTGAGGATGATAATCGTGATGTTAATTACGGCAATTTTCTTTCGCTGCGTCACTGCGACCAACCATTCCGTTGGTGGATCTTCCGGTTGGGATCTCAATTCCAACATCCTGGCTTGGTCTGCGACCACCACGTTCCAAGTCGGTGACTATCTCGTGTTCAAGTACTTGCCAGTTCACGACGTGCTGGAAGTGAACCGAACAGACTTCTTCAATTGCCGCACCGTGAACCCAATCAGCACTCACAGTGACGGGGAGACAGTGATCCGCCTGAACCAACTAGGCAGTCGCTACTTCATATGTGGCCGCCCTCAACACTGCCTCATGGGTCTCAAGCTCCGAGTGCAAGTCCTCCAACGCTTGACCGACGCCAACAATTCAACGCATGGCGGCGCTAACCAAGAGGAGCGACTTAGGCCACGCCACCCTCCTCGTTCTCCTCCCTCCCCACCCTCTTCTCCACCCATTGAACGCCCACCAATGCCCGACCTTCCGGTGGCGCCATCGCCTTGCATTTGTTCCGGGGTGGGCGAGATGATGATGAAAAATGGCTCAATGAACTGGTATTTCGTGTTGCTCTTGATTATGCTTACTTCCATTCCTTGA MEAPRPGWAVRMIIVMLITAIFFRCVTATNHSVGGSSGWDLNSNILAWSATTTFQVGDYLVFKYLPVHDVLEVNRTDFFNCRTVNPISTHSDGETVIRLNQLGSRYFICGRPQHCLMGLKLRVQVLQRLTDANNSTHGGANQEERLRPRHPPRSPPSPPSSPPIERPPMPDLPVAPSPCICSGVGEMMMKNGSMNWYFVLLLIMLTSIP Homology
BLAST of CmUC04G079910.1 vs. NCBI nr
Match: XP_038896032.1 (uclacyanin 1-like [Benincasa hispida]) HSP 1 Score: 380.6 bits (976), Expect = 8.9e-102 Identity = 190/209 (90.91%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. NCBI nr
Match: XP_008437239.1 (PREDICTED: chemocyanin-like [Cucumis melo] >KAA0036048.1 chemocyanin-like [Cucumis melo var. makuwa] >TYJ98855.1 chemocyanin-like [Cucumis melo var. makuwa]) HSP 1 Score: 354.8 bits (909), Expect = 5.2e-94 Identity = 178/210 (84.76%), Postives = 184/210 (87.62%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. NCBI nr
Match: XP_004137571.1 (uclacyanin 1 [Cucumis sativus] >KGN63959.1 hypothetical protein Csa_014141 [Cucumis sativus]) HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92 Identity = 176/210 (83.81%), Postives = 182/210 (86.67%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. NCBI nr
Match: KAG6584434.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020021.1 Uclacyanin 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85 Identity = 167/215 (77.67%), Postives = 180/215 (83.72%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. NCBI nr
Match: XP_022924128.1 (uclacyanin 1-like [Cucurbita moschata]) HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85 Identity = 167/215 (77.67%), Postives = 180/215 (83.72%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.3e-22 Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14 Identity = 49/136 (36.03%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.6e-14 Identity = 67/189 (35.45%), Postives = 82/189 (43.39%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.3e-14 Identity = 55/172 (31.98%), Postives = 78/172 (45.35%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13 Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy TrEMBL
Match: A0A5A7SZN3 (Chemocyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00500 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94 Identity = 178/210 (84.76%), Postives = 184/210 (87.62%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy TrEMBL
Match: A0A1S3AT69 (chemocyanin-like OS=Cucumis melo OX=3656 GN=LOC103482701 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94 Identity = 178/210 (84.76%), Postives = 184/210 (87.62%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy TrEMBL
Match: A0A0A0LSJ2 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031800 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 8.2e-93 Identity = 176/210 (83.81%), Postives = 182/210 (86.67%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy TrEMBL
Match: A0A6J1EBH8 (uclacyanin 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431657 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 9.7e-86 Identity = 167/215 (77.67%), Postives = 180/215 (83.72%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. ExPASy TrEMBL
Match: A0A6J1KLQ1 (uclacyanin 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495322 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.1e-84 Identity = 164/215 (76.28%), Postives = 179/215 (83.26%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 ) HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23 Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20 Identity = 63/185 (34.05%), Postives = 90/185 (48.65%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20 Identity = 41/112 (36.61%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19 Identity = 60/155 (38.71%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CmUC04G079910.1 vs. TAIR 10
Match: AT3G27200.1 (Cupredoxin superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18 Identity = 41/131 (31.30%), Postives = 78/131 (59.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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