CmUC04G075080.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCGGTGCCCAAAAACACAAACCATCCTACTCCTCCAGTGACGATGCATCTCTCCGACGACTACCCCCACCAACTCTCCTCCTTCCTCCACCGCCACCCACTGGCTCACATGATCCGCAACCACCAAGTCCCCTCTCGGACCCACCGGATCTGCGATGTTTGCCGTGAATCCATCAACGGAAATTTCTACCACTGCAAAGACTGCCACTTCCACGTCCACTCATTTTGCACCCGCCTCCCCGACAACCTCCGCCACGTCATTGATCCCAACCATAAGCTCCGCCTCTACAAGCTCTCCTCCGGCCACTGTTCTATTTGCAAAGCTGATTGTTCTTCTCTCTGGGTTTATGGTTGCACCGTTTGTGAAGTCAATATTCATCTTAATTGCCTTCGGAAACAGACCGGCCATCCGCCTTCTAGTTCACGTGGGATGCACCACCATGCACCTCCGCCGTGGACGGCGGGGCCACCCCAAGCGAATTACAATTTTGGTGGATTTCCCGGTTGGGGATATCCAAATTACAATTTTGGGCATCCTGGAAATGCTCAATTTGCTTACAATTACAATAATCATCATCAGATTAATCATGGTGGACATGGATATGGAGTTGCAGCTTCCTCGTCATCGTCGAGCTTGGGATCGGTGTTAGAGAACGCAATGTTTTCTCTGGTTGGGAATTTGGCGATTGGTTCTCTCACTGATTTTATTTTCGGTTCCATTGGTTTTTAATCCTTTTAAGTTCTAACGGTGTTTTTATTTCTTCAGCAGATCCAGAATTTTTATGTCAGGGTTGGCATAAATTCATATAAATAATGTAATTTTTAAATGCAGTCTCTCACTGGTTTTTAATGTCTTGATTTAAGCGGATCCTTAATTTTATGTTTTTAATTTTAGGTGTCTTGATTTAGTACTCAAATTAAAGTAATACAAGTTAATAAATTAATAGTTTACAATTGTGCCTTATAACTATTTGTTATTGTTTAATGTTATAGAGACTGAGAACATGAATTTATATATACATAATTTTATATTGATTTTTTTTTAAATAAAATTTAATTGAATAAACTAAAAAATTGAAATCCGAAGCAATAAGGCTTTACTAAAATTGAGTTAAAAGATCAAATTGATTTTTTAAAAAATAATTCCATATTTCATACCAAAAAAATTTTAAAATTTAAAAACTATTTCTATGCAATTATATAATATAATTTTATATTGAGGGGGAGCACATGCCCCCTTGGCCCCTTCATTTATCCATTGGTTCCTTCCTCTCTTCGATAATTTTCTTCCCTCTCATTATATTCATATATGATATAACCAAATGTTTCTAGCGTTATTGATAAACAGGTGGAGGAGGAGAATGGTAAACTGGAAGTGGAGGAGAGTGATACACAGGTGGAGGAGGAGAGTAATAAACAGGAGGTGGTGTTGATTCATACTCCTGCTTCTTTGGTGGGGGTAGAGAGTGATAACCGGAGGTGGTGGGGAGTGATAAATAGGTGGGAGAGTAGAATGGTAAACTGGAGGTGGAGGAGAGTGATATACTGGGGGAGGAGGAGAGTAATAAATAGGAGGTGGTGGTGATTTATACTCCTGCTTCTTTGGTGGGGGTGGAGAGTAATAAACTAGAGGTGGTGGAGAGTGATAAACAGGTGGTGGAGGAGAATGGTAAATAG ATGGCTCCGGTGCCCAAAAACACAAACCATCCTACTCCTCCAGTGACGATGCATCTCTCCGACGACTACCCCCACCAACTCTCCTCCTTCCTCCACCGCCACCCACTGGCTCACATGATCCGCAACCACCAAGTCCCCTCTCGGACCCACCGGATCTGCGATGTTTGCCGTGAATCCATCAACGGAAATTTCTACCACTGCAAAGACTGCCACTTCCACGTCCACTCATTTTGCACCCGCCTCCCCGACAACCTCCGCCACGTCATTGATCCCAACCATAAGCTCCGCCTCTACAAGCTCTCCTCCGGCCACTGTTCTATTTGCAAAGCTGATTGTTCTTCTCTCTGGGTTTATGGTTGCACCGTTTGTGAAGTCAATATTCATCTTAATTGCCTTCGGAAACAGACCGGCCATCCGCCTTCTAGTTCACGTGGGATGCACCACCATGCACCTCCGCCGTGGACGGCGGGGCCACCCCAAGCGAATTACAATTTTGGTGGATTTCCCGGTTGGGGATATCCAAATTACAATTTTGGGCATCCTGGAAATGCTCAATTTGCTTACAATTACAATAATCATCATCAGATTAATCATGGTGGACATGGATATGGAGTTGCAGCTTCCTCGTCATCGTCGAGCTTGGGATCGGTGTTAGAGAACGCAATGTTTTCTCTGGTGGAGGAGGAGAATGGTAAACTGGAAGTGGAGGAGAGTGATACACAGGTGGAGGAGGAGAGTAATAAACAGGAGGTGGTGTTGATTCATACTCCTGCTTCTTTGGTGGGGGTAGAGAGTGATAACCGGAGGTGGTGGGGAGTGATAAATAGGTGGGAGAGTAGAATGAGTAATAAACTAGAGGTGGTGGAGAGTGATAAACAGGTGGTGGAGGAGAATGGTAAATAG ATGGCTCCGGTGCCCAAAAACACAAACCATCCTACTCCTCCAGTGACGATGCATCTCTCCGACGACTACCCCCACCAACTCTCCTCCTTCCTCCACCGCCACCCACTGGCTCACATGATCCGCAACCACCAAGTCCCCTCTCGGACCCACCGGATCTGCGATGTTTGCCGTGAATCCATCAACGGAAATTTCTACCACTGCAAAGACTGCCACTTCCACGTCCACTCATTTTGCACCCGCCTCCCCGACAACCTCCGCCACGTCATTGATCCCAACCATAAGCTCCGCCTCTACAAGCTCTCCTCCGGCCACTGTTCTATTTGCAAAGCTGATTGTTCTTCTCTCTGGGTTTATGGTTGCACCGTTTGTGAAGTCAATATTCATCTTAATTGCCTTCGGAAACAGACCGGCCATCCGCCTTCTAGTTCACGTGGGATGCACCACCATGCACCTCCGCCGTGGACGGCGGGGCCACCCCAAGCGAATTACAATTTTGGTGGATTTCCCGGTTGGGGATATCCAAATTACAATTTTGGGCATCCTGGAAATGCTCAATTTGCTTACAATTACAATAATCATCATCAGATTAATCATGGTGGACATGGATATGGAGTTGCAGCTTCCTCGTCATCGTCGAGCTTGGGATCGGTGTTAGAGAACGCAATGTTTTCTCTGGTGGAGGAGGAGAATGGTAAACTGGAAGTGGAGGAGAGTGATACACAGGTGGAGGAGGAGAGTAATAAACAGGAGGTGGTGTTGATTCATACTCCTGCTTCTTTGGTGGGGGTAGAGAGTGATAACCGGAGGTGGTGGGGAGTGATAAATAGGTGGGAGAGTAGAATGAGTAATAAACTAGAGGTGGTGGAGAGTGATAAACAGGTGGTGGAGGAGAATGGTAAATAG MAPVPKNTNHPTPPVTMHLSDDYPHQLSSFLHRHPLAHMIRNHQVPSRTHRICDVCRESINGNFYHCKDCHFHVHSFCTRLPDNLRHVIDPNHKLRLYKLSSGHCSICKADCSSLWVYGCTVCEVNIHLNCLRKQTGHPPSSSRGMHHHAPPPWTAGPPQANYNFGGFPGWGYPNYNFGHPGNAQFAYNYNNHHQINHGGHGYGVAASSSSSSLGSVLENAMFSLVEEENGKLEVEESDTQVEEESNKQEVVLIHTPASLVGVESDNRRWWGVINRWESRMSNKLEVVESDKQVVEENGK Homology
BLAST of CmUC04G075080.1 vs. NCBI nr
Match: XP_038882330.1 (uncharacterized protein LOC120073579 [Benincasa hispida]) HSP 1 Score: 339.7 bits (870), Expect = 2.5e-89 Identity = 166/228 (72.81%), Postives = 178/228 (78.07%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. NCBI nr
Match: XP_023545039.1 (uncharacterized protein LOC111804464 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.1 bits (780), Expect = 6.8e-79 Identity = 149/223 (66.82%), Postives = 161/223 (72.20%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. NCBI nr
Match: XP_022950007.1 (uncharacterized protein LOC111453231 [Cucurbita moschata] >KAG6603633.1 hypothetical protein SDJN03_04242, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 304.3 bits (778), Expect = 1.2e-78 Identity = 149/223 (66.82%), Postives = 161/223 (72.20%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. NCBI nr
Match: XP_022978279.1 (uncharacterized protein LOC111478313 [Cucurbita maxima]) HSP 1 Score: 293.9 bits (751), Expect = 1.6e-75 Identity = 144/223 (64.57%), Postives = 158/223 (70.85%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. NCBI nr
Match: XP_004142193.1 (uncharacterized protein LOC101203241 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 4.8e-72 Identity = 147/231 (63.64%), Postives = 161/231 (69.70%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. ExPASy TrEMBL
Match: A0A6J1GDM7 (uncharacterized protein LOC111453231 OS=Cucurbita moschata OX=3662 GN=LOC111453231 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 5.7e-79 Identity = 149/223 (66.82%), Postives = 161/223 (72.20%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. ExPASy TrEMBL
Match: A0A6J1ITN5 (uncharacterized protein LOC111478313 OS=Cucurbita maxima OX=3661 GN=LOC111478313 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 7.6e-76 Identity = 144/223 (64.57%), Postives = 158/223 (70.85%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. ExPASy TrEMBL
Match: A0A0A0L116 (C1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296890 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72 Identity = 147/231 (63.64%), Postives = 161/231 (69.70%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. ExPASy TrEMBL
Match: A0A5D3DJ37 (Diacylglycerol kinase theta-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00800 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 6.7e-72 Identity = 146/231 (63.20%), Postives = 165/231 (71.43%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. ExPASy TrEMBL
Match: A0A6J1F0M0 (uncharacterized protein LOC111438147 OS=Cucurbita moschata OX=3662 GN=LOC111438147 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62 Identity = 130/222 (58.56%), Postives = 146/222 (65.77%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. TAIR 10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 102.1 bits (253), Expect = 8.2e-22 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. TAIR 10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 79.7 bits (195), Expect = 4.4e-15 Identity = 56/183 (30.60%), Postives = 87/183 (47.54%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. TAIR 10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.9e-11 Identity = 34/111 (30.63%), Postives = 57/111 (51.35%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. TAIR 10
Match: AT2G37780.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 49.3 bits (116), Expect = 6.3e-06 Identity = 47/188 (25.00%), Postives = 70/188 (37.23%), Query Frame = 0
BLAST of CmUC04G075080.1 vs. TAIR 10
Match: AT2G27660.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.2e-04 Identity = 64/238 (26.89%), Postives = 93/238 (39.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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