CmUC04G069710.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC04G069710.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr04: 6061311 .. 6061631 (-)
Sequence length	321
RNA-Seq Expression	CmUC04G069710.1
Synteny	CmUC04G069710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAACAGCATCATATTGTGAAGACAATTCTTCACAAAACCCTGACCTTGGCTTAGAAAATGAGCATAGTCATGATTTAGAAGATGTGCATTCACATGATTTTACTCAGAATCAACATCATTCTGAAAATAGATCTAAGTTGGAATCAGCAGAACTCTTTGGGCGGACTTATGAGAGAAGGAAAAATCATCGGGATCCTGAAACTGTCCCTCCTCTTGTCTGTCAAGAATCTGAACCAAGATCAGACGAATCCCTAGGTGAAAAGCCTATCTCTGATCTTGATATTTCTATAGATTTGCGAAAAGGAAAATGTTGA

mRNA sequence

ATGGTTTCAACAGCATCATATTGTGAAGACAATTCTTCACAAAACCCTGACCTTGGCTTAGAAAATGAGCATAGTCATGATTTAGAAGATGTGCATTCACATGATTTTACTCAGAATCAACATCATTCTGAAAATAGATCTAAGTTGGAATCAGCAGAACTCTTTGGGCGGACTTATGAGAGAAGGAAAAATCATCGGGATCCTGAAACTGTCCCTCCTCTTGTCTGTCAAGAATCTGAACCAAGATCAGACGAATCCCTAGGTGAAAAGCCTATCTCTGATCTTGATATTTCTATAGATTTGCGAAAAGGAAAATGTTGA

Coding sequence (CDS)

ATGGTTTCAACAGCATCATATTGTGAAGACAATTCTTCACAAAACCCTGACCTTGGCTTAGAAAATGAGCATAGTCATGATTTAGAAGATGTGCATTCACATGATTTTACTCAGAATCAACATCATTCTGAAAATAGATCTAAGTTGGAATCAGCAGAACTCTTTGGGCGGACTTATGAGAGAAGGAAAAATCATCGGGATCCTGAAACTGTCCCTCCTCTTGTCTGTCAAGAATCTGAACCAAGATCAGACGAATCCCTAGGTGAAAAGCCTATCTCTGATCTTGATATTTCTATAGATTTGCGAAAAGGAAAATGTTGA

Protein sequence

MVSTASYCEDNSSQNPDLGLENEHSHDLEDVHSHDFTQNQHHSENRSKLESAELFGRTYERRKNHRDPETVPPLVCQESEPRSDESLGEKPISDLDISIDLRKGKC

Homology

The following BLAST results are available for this feature:

BLAST of CmUC04G069710.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069710.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069710.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC04G069710.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC04G069710	CmUC04G069710	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069710.1-exon	CmUC04G069710.1-exon-CmU531Chr04:6061311..6061631	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC04G069710.1-cds	CmUC04G069710.1-cds-CmU531Chr04:6061311..6061631	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC04G069710.1	CmUC04G069710.1-protein	polypeptide