CmUC03G056520.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC03G056520.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	101 kDa malaria antigen-like
Location	CmU531Chr03: 7172904 .. 7174259 (-)
Sequence length	881
RNA-Seq Expression	CmUC03G056520.1
Synteny	CmUC03G056520.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTGTGTTTGTTTGTTGATATATATTTGATGAGGGGATTTTCAACAGCAAAATCCTTAGTAATGGCAATAAACTTACCCAAAAAGTTCCTCCATTTACTTGCAAAGGGAGCTCTGTTTCTTCTCATCTTCTTCATTTTCTTCTCTGTTTTCAAACTTTCTCTTTCAACTGATCTCTCCAACCACACCAACTTCTGGTTTTTCCTTTCCAACACTCTCATTTTCATCATTGCCGCCGATTCCGGCGCTTTCTCTCCGCCCCCCACCTTCACCGCCGCAGCCAAAACCATCTCATCTCCTCCACAACATAACCTTAATAAGACTGTCGTCCTTAATGAACCTCCTAATGAAGAAGAAGAAGAAGAAATAATAATCCCACTCACCACAGGTAAAGTTCACACAAAAATTCTCTCTCCCCTATTTTTTAATATCCTCGTCAAATCCACTTGTTCAATTAAATAAGAGTAATGGTAGATGAATTCGACTATCAAAACAAATAAATTAAAAATATATTGTAAAAACTTATTGTAGCCAAGCATAGCTTGCGAGTAACCAACATGTAATTCTTTTATTGCAGTAAATATGTGGTCATATTAATAAACAAAAGTTTAGAAAGTATAAAAGAAATTAATGTTTTTCGTATAGGTAACCTCATTAAACATATTTTCCTTTTGAATTTTTAATAATTAAAAGTAGTCATTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTTTATTTTATTTTATTTTTAAATAAAAATGTTTCATTAAAAATACTTTTTTCTTAAAGACATTCCATAATCTCATCTTAGTGTTGATTCATTTTGTGTCGATTATTTCAGAAATTTCTATTCCTCCTGAGTTTAATAATCCAAGAAGATCCTACCAACGAAGCAAGTCAGAGAAAGAGATAAAAAGAGTAGGAGAGAAAGCAAGAAAAATTATGATGAGGAGATCCAAGATGATGATACGACACGATATGACATCGACAAAAAAGGAGGAAGAAGAAAATGAGTTTGCTGAGATGACAAATGAAGAATTGAACAGAAGAGTTGAAGAGTTTATTGAAAGATTCAACAGACAAATAAGACTCCAAAAAACTAATGAAGATGGCAATGAGAATAGAGAGCTTTTAATTTAATTTGTTGTCTATATGTGTAATATGCATTAAGTATTTTTGTTTTGTTTTTAGTTAGTGTGTGTTGTCTTCTTCCTCACTTGTCTCTTTCCAAATAGCTCTAGTTTTTATTTTCTTCTTTAGTGGTGATAACTGATAATGCTTTTTCATGTATGGACCTGTCTTTATCCACAATCCACATATATGAATCATCTTCC

mRNA sequence

TCCTTGTGTTTGTTTGTTGATATATATTTGATGAGGGGATTTTCAACAGCAAAATCCTTAGTAATGGCAATAAACTTACCCAAAAAGTTCCTCCATTTACTTGCAAAGGGAGCTCTGTTTCTTCTCATCTTCTTCATTTTCTTCTCTGTTTTCAAACTTTCTCTTTCAACTGATCTCTCCAACCACACCAACTTCTGGTTTTTCCTTTCCAACACTCTCATTTTCATCATTGCCGCCGATTCCGGCGCTTTCTCTCCGCCCCCCACCTTCACCGCCGCAGCCAAAACCATCTCATCTCCTCCACAACATAACCTTAATAAGACTGTCGTCCTTAATGAACCTCCTAATGAAGAAGAAGAAGAAGAAATAATAATCCCACTCACCACAGAAATTTCTATTCCTCCTGAGTTTAATAATCCAAGAAGATCCTACCAACGAAGCAAGTCAGAGAAAGAGATAAAAAGAGTAGGAGAGAAAGCAAGAAAAATTATGATGAGGAGATCCAAGATGATGATACGACACGATATGACATCGACAAAAAAGGAGGAAGAAGAAAATGAGTTTGCTGAGATGACAAATGAAGAATTGAACAGAAGAGTTGAAGAGTTTATTGAAAGATTCAACAGACAAATAAGACTCCAAAAAACTAATGAAGATGGCAATGAGAATAGAGAGCTTTTAATTTAATTTGTTGTCTATATGTGTAATATGCATTAAGTATTTTTGTTTTGTTTTTAGTTAGTGTGTGTTGTCTTCTTCCTCACTTGTCTCTTTCCAAATAGCTCTAGTTTTTATTTTCTTCTTTAGTGGTGATAACTGATAATGCTTTTTCATGTATGGACCTGTCTTTATCCACAATCCACATATATGAATCATCTTCC

Coding sequence (CDS)

ATGAGGGGATTTTCAACAGCAAAATCCTTAGTAATGGCAATAAACTTACCCAAAAAGTTCCTCCATTTACTTGCAAAGGGAGCTCTGTTTCTTCTCATCTTCTTCATTTTCTTCTCTGTTTTCAAACTTTCTCTTTCAACTGATCTCTCCAACCACACCAACTTCTGGTTTTTCCTTTCCAACACTCTCATTTTCATCATTGCCGCCGATTCCGGCGCTTTCTCTCCGCCCCCCACCTTCACCGCCGCAGCCAAAACCATCTCATCTCCTCCACAACATAACCTTAATAAGACTGTCGTCCTTAATGAACCTCCTAATGAAGAAGAAGAAGAAGAAATAATAATCCCACTCACCACAGAAATTTCTATTCCTCCTGAGTTTAATAATCCAAGAAGATCCTACCAACGAAGCAAGTCAGAGAAAGAGATAAAAAGAGTAGGAGAGAAAGCAAGAAAAATTATGATGAGGAGATCCAAGATGATGATACGACACGATATGACATCGACAAAAAAGGAGGAAGAAGAAAATGAGTTTGCTGAGATGACAAATGAAGAATTGAACAGAAGAGTTGAAGAGTTTATTGAAAGATTCAACAGACAAATAAGACTCCAAAAAACTAATGAAGATGGCAATGAGAATAGAGAGCTTTTAATTTAA

Protein sequence

MRGFSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEENEFAEMTNEELNRRVEEFIERFNRQIRLQKTNEDGNENRELLI

Homology

[Close]

BLAST of CmUC03G056520.1 vs. NCBI nr
Match: XP_038895571.1 (uncharacterized protein LOC120083777 [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-71
Identity = 168/226 (74.34%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MRGFSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLS 60
           MRGFS AKSLVM I LPKKFLHL AK ALFLL FFI+F     SLS++L NHTNFWFFL+
Sbjct: 4   MRGFSAAKSLVMGIKLPKKFLHLFAKAALFLLSFFIYF-----SLSSNLFNHTNFWFFLT 63

Query: 61  NTLIFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPN------EEEEEEII 120
           NTLIFIIAADSGAFSPP +F AA  T+ +PP+ + NK VV+ EPPN       EEEEEII
Sbjct: 64  NTLIFIIAADSGAFSPPSSFVAATDTVPTPPK-DFNKIVVVKEPPNSPILTQNEEEEEII 123

Query: 121 IPLTTE-ISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTST-KKE 180
           I LTTE  SIPP+FNN R+SYQRSKSEKEIKR+ EKA KI M+RSK MIRHD T+T KKE
Sbjct: 124 IQLTTEKTSIPPKFNNSRKSYQRSKSEKEIKRLREKAGKITMKRSKTMIRHDTTTTKKKE 183

Query: 181 EEENEFAEMTNEELNRRVEEFIERFNRQIRLQKTNEDGNENRELLI 219
           EE++EFAEMTNEELNRRVEEFIERFNRQIRLQ+ NE GNENRELLI
Sbjct: 184 EEKDEFAEMTNEELNRRVEEFIERFNRQIRLQEINEHGNENRELLI 223

[Close]

BLAST of CmUC03G056520.1 vs. NCBI nr
Match: XP_008444445.1 (PREDICTED: 101 kDa malaria antigen-like [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 5.9e-64
Identity = 151/227 (66.52%), Postives = 169/227 (74.45%), Query Frame = 0


Query: 1   MRGFSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLS 60
           MR FS  KS+VM I LPKKFLHL AK ALFL+ FF FF     SLS+D  NHTNFWFFLS
Sbjct: 1   MREFSAPKSVVMNIKLPKKFLHLFAKAALFLIFFFFFFFFVYFSLSSDFFNHTNFWFFLS 60

Query: 61  NTLIFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPN-----------EEE 120
           NTLIFIIA DSGAFS P +F  AAK   + PQHN N T+V+NE PN           EEE
Sbjct: 61  NTLIFIIALDSGAFSSPSSFIPAAKPNPTSPQHNFNNTIVVNELPNSPIPAQKEEEEEEE 120

Query: 121 EEEIIIPLTTEISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTST 180
           EEEI IPLTTEISIPP+FNNP + YQRSKSEK+IKR+  KA+KI M+RSK MIR D TST
Sbjct: 121 EEEITIPLTTEISIPPKFNNPIKPYQRSKSEKDIKRMAGKAKKITMKRSKTMIRQDATST 180

Query: 181 K--------KEEEENEFAEMTNEELNRRVEEFIERFNRQIRLQKTNE 209
           K        +EEE+NEF +MT+EELNRRVEEFIERFNRQIRLQ+ NE
Sbjct: 181 KEKEEEEEEEEEEKNEFTKMTDEELNRRVEEFIERFNRQIRLQQINE 227

[Close]

BLAST of CmUC03G056520.1 vs. NCBI nr
Match: XP_011657186.2 (uncharacterized protein LOC105435817 [Cucumis sativus] >KGN65525.1 hypothetical protein Csa_020076 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61
Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 4   FSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTL 63
           FS  KS+VM I LPKKFL+L AKGALFL+ FF  +     SLS+DL NHTNFWFFLSNTL
Sbjct: 5   FSAPKSVVMNIKLPKKFLYLFAKGALFLISFFFIY----FSLSSDLFNHTNFWFFLSNTL 64

Query: 64  IFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPN-----EEEEEEIIIPLT 123
           IF+IA DSGAFS P +F  AAK   S PQHN N T+V+N+ PN     + EEEE IIPLT
Sbjct: 65  IFVIALDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLT 124

Query: 124 TEISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEEN-E 183
           TEIS P +FNNP + YQRSKSEK+IKR+ EKA+K+ MRRSK MI+ + TSTK++EEEN E
Sbjct: 125 TEISFPCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDE 184

Query: 184 FAEMTNEELNRRVEEFIERFNRQIRLQKTNEDGNENRE 216
           F +MT+EELNRRVEEFIERFNRQIRLQ+ NED NE  +
Sbjct: 185 FTKMTDEELNRRVEEFIERFNRQIRLQEMNEDENEKED 218

[Close]

BLAST of CmUC03G056520.1 vs. NCBI nr
Match: XP_022927241.1 (uncharacterized protein LOC111434146 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 6.6e-39
Identity = 122/201 (60.70%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 12  MAINLPKKFLHLLAKGAL----FLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFII 71
           MA+   +KFLHL A+ AL    FLL  FI+FS F LSLST L  HT FWF LSNTLIFII
Sbjct: 1   MAMKPRRKFLHLYAEEALCFFAFLLSLFIYFSAFNLSLST-LFRHTTFWFCLSNTLIFII 60

Query: 72  AADSGAFSPPPTFTAAAKT--ISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPP 131
           AA S AFS PPTF AAA +  I +PP +N N     N   N ++++   IPL TEISI  
Sbjct: 61  AAHSRAFSQPPTFNAAASSVIIPTPPPNNFNSG---NPTENHQQQQ---IPLPTEISI-- 120

Query: 132 EFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEE--NEFAEMTN 191
             NNPR+SY RSKSEK I+RV  K  KI MRRSK M R+D TST+ E+EE  NE AEM+N
Sbjct: 121 --NNPRKSYDRSKSEKAIRRVA-KETKIAMRRSKTMTRNDATSTRNEKEETKNELAEMSN 180

Query: 192 EELNRRVEEFIERFNRQIRLQ 205
           EELN++VEEFIERFNRQ+RLQ
Sbjct: 181 EELNKKVEEFIERFNRQMRLQ 189

[Close]

BLAST of CmUC03G056520.1 vs. NCBI nr
Match: XP_023520396.1 (uncharacterized protein LOC111783708 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 6.2e-37
Identity = 117/205 (57.07%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 12  MAINLPKKFLHLLAKGAL----FLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFII 71
           MA+   +KFLHL A+ AL    FLL  FI+FS F LSLST L  HT FWF LSNTLIFII
Sbjct: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLST-LFRHTTFWFCLSNTLIFII 60

Query: 72  AADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPPEF 131
           AA S AFSPPPTF +AA  I +PPQ+N N     N   N ++++   IPL TEISI    
Sbjct: 61  AAHSRAFSPPPTFNSAAVIIPTPPQNNFNSG---NPTENHQQQQ---IPLPTEISI---- 120

Query: 132 NNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEENEFAEMTNEELN 191
           NN R+SY  SKSEK ++RV  K  K+ MRRSK M R++     KEE +NE AEM+NEELN
Sbjct: 121 NNSRKSYDPSKSEKAMRRVA-KETKMAMRRSKTMTRNE-----KEETKNELAEMSNEELN 180

Query: 192 RRVEEFIERFNRQIRLQKTNEDGNE 213
           +RVEEFIERFNRQ+RLQ   +   E
Sbjct: 181 KRVEEFIERFNRQMRLQAIGDSNEE 188

[Close]

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL
Match: A0A1S3B9V3 (101 kDa malaria antigen-like OS=Cucumis melo OX=3656 GN=LOC103487765 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.9e-64
Identity = 151/227 (66.52%), Postives = 169/227 (74.45%), Query Frame = 0


Query: 1   MRGFSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLS 60
           MR FS  KS+VM I LPKKFLHL AK ALFL+ FF FF     SLS+D  NHTNFWFFLS
Sbjct: 1   MREFSAPKSVVMNIKLPKKFLHLFAKAALFLIFFFFFFFFVYFSLSSDFFNHTNFWFFLS 60

Query: 61  NTLIFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPN-----------EEE 120
           NTLIFIIA DSGAFS P +F  AAK   + PQHN N T+V+NE PN           EEE
Sbjct: 61  NTLIFIIALDSGAFSSPSSFIPAAKPNPTSPQHNFNNTIVVNELPNSPIPAQKEEEEEEE 120

Query: 121 EEEIIIPLTTEISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTST 180
           EEEI IPLTTEISIPP+FNNP + YQRSKSEK+IKR+  KA+KI M+RSK MIR D TST
Sbjct: 121 EEEITIPLTTEISIPPKFNNPIKPYQRSKSEKDIKRMAGKAKKITMKRSKTMIRQDATST 180

Query: 181 K--------KEEEENEFAEMTNEELNRRVEEFIERFNRQIRLQKTNE 209
           K        +EEE+NEF +MT+EELNRRVEEFIERFNRQIRLQ+ NE
Sbjct: 181 KEKEEEEEEEEEEKNEFTKMTDEELNRRVEEFIERFNRQIRLQQINE 227

[Close]

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL
Match: A0A0A0LUF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435700 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 145/218 (66.51%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 4   FSTAKSLVMAINLPKKFLHLLAKGALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTL 63
           FS  KS+VM I LPKKFL+L AKGALFL+ FF  +     SLS+DL NHTNFWFFLSNTL
Sbjct: 5   FSAPKSVVMNIKLPKKFLYLFAKGALFLISFFFIY----FSLSSDLFNHTNFWFFLSNTL 64

Query: 64  IFIIAADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPN-----EEEEEEIIIPLT 123
           IF+IA DSGAFS P +F  AAK   S PQHN N T+V+N+ PN     + EEEE IIPLT
Sbjct: 65  IFVIALDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLT 124

Query: 124 TEISIPPEFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEEN-E 183
           TEIS P +FNNP + YQRSKSEK+IKR+ EKA+K+ MRRSK MI+ + TSTK++EEEN E
Sbjct: 125 TEISFPCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDE 184

Query: 184 FAEMTNEELNRRVEEFIERFNRQIRLQKTNEDGNENRE 216
           F +MT+EELNRRVEEFIERFNRQIRLQ+ NED NE  +
Sbjct: 185 FTKMTDEELNRRVEEFIERFNRQIRLQEMNEDENEKED 218

[Close]

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL
Match: A0A6J1EH50 (uncharacterized protein LOC111434146 OS=Cucurbita moschata OX=3662 GN=LOC111434146 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39
Identity = 122/201 (60.70%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 12  MAINLPKKFLHLLAKGAL----FLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFII 71
           MA+   +KFLHL A+ AL    FLL  FI+FS F LSLST L  HT FWF LSNTLIFII
Sbjct: 1   MAMKPRRKFLHLYAEEALCFFAFLLSLFIYFSAFNLSLST-LFRHTTFWFCLSNTLIFII 60

Query: 72  AADSGAFSPPPTFTAAAKT--ISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPP 131
           AA S AFS PPTF AAA +  I +PP +N N     N   N ++++   IPL TEISI  
Sbjct: 61  AAHSRAFSQPPTFNAAASSVIIPTPPPNNFNSG---NPTENHQQQQ---IPLPTEISI-- 120

Query: 132 EFNNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEE--NEFAEMTN 191
             NNPR+SY RSKSEK I+RV  K  KI MRRSK M R+D TST+ E+EE  NE AEM+N
Sbjct: 121 --NNPRKSYDRSKSEKAIRRVA-KETKIAMRRSKTMTRNDATSTRNEKEETKNELAEMSN 180

Query: 192 EELNRRVEEFIERFNRQIRLQ 205
           EELN++VEEFIERFNRQ+RLQ
Sbjct: 181 EELNKKVEEFIERFNRQMRLQ 189

[Close]

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL
Match: A0A6J1KIQ0 (uncharacterized protein LOC111495597 OS=Cucurbita maxima OX=3661 GN=LOC111495597 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-35
Identity = 117/205 (57.07%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 12  MAINLPKKFLHLLAKGAL----FLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFII 71
           MA+    K LHL A+ AL    FLL  FI+FS F LSLST L  H NFWF LSNTL+ II
Sbjct: 1   MAMKPRSKCLHLYAEEALCFSAFLLSLFIYFSAFNLSLST-LFRHPNFWFCLSNTLVVII 60

Query: 72  AADSGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPPEF 131
           AA S AFSPPPTF A    I +PP +N +     +  P E +E++  IPL TEI IP E 
Sbjct: 61  AAHSRAFSPPPTFNAV--IIPTPPPNNFS-----SGNPTENQEQQ--IPLPTEILIPLEL 120

Query: 132 NNPRRSYQRSKSEKEIKRVGEKARKIMMRRSKMMIRHDMTSTKKEEEENEFAEMTNEELN 191
           NN R+SY RSKSEK ++RV  K  KI MRRSK M R++     +EE +NE AEM+NEELN
Sbjct: 121 NNSRKSYDRSKSEKAMRRVA-KETKIAMRRSKTMTRNE-----EEERKNELAEMSNEELN 180

Query: 192 RRVEEFIERFNRQIRLQKTNEDGNE 213
           +RVEEFIERFNRQIRLQ    D NE
Sbjct: 181 KRVEEFIERFNRQIRLQAIG-DSNE 188

[Close]

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL
Match: A0A6J1CEX1 (uncharacterized protein LOC111010873 OS=Momordica charantia OX=3673 GN=LOC111010873 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20
Identity = 89/195 (45.64%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 16  LPKKFLHLLAKG-----ALFLLIFFIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFIIAAD 75
           L +++L+L+A+G     A FLL  F + SV  LS    L +   FWF +SNTLIFIIA D
Sbjct: 6   LAEEYLNLIAEGAPSFFAFFLLSIFTYVSVLNLSDLPTLFSDAKFWFCISNTLIFIIAVD 65

Query: 76  SGAFSPPPTFTAAAKTISSPPQHNLNKTVVLNEPPNEEEEEEIIIPLTTEISIPPEFNNP 135
            GAFSPPP      + I S    N +   ++ E PN+   E                 N 
Sbjct: 66  FGAFSPPP------EQIKSKQSEN-SAVKIVRERPNKSYRE-------------TRRGNS 125

Query: 136 RRSYQRSKSEKEIKRVGEKARKIMMRRSK-MMIRHDMTSTKKEEEENEFAEMTNEELNRR 195
            ++Y+RSKSEK +    EK RKI MRRSK M I+      +  +E+NEF EMT+EELNRR
Sbjct: 126 AKTYRRSKSEKAV----EKERKIAMRRSKTMTIKLHDEEEEASKEDNEFEEMTDEELNRR 176

Query: 196 VEEFIERFNRQIRLQ 205
           VEEFIERFNR+IRLQ
Sbjct: 186 VEEFIERFNRRIRLQ 176

[Close]

BLAST of CmUC03G056520.1 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 9.2e-07
Identity = 79/244 (32.38%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 29  LFLLIF--FIFFSVFKLSLSTDLSNHTNFWFFLSNTLIFIIAADSGAFSPPPT------F 88
           +FL IF   + F VF++SLS+ +   T   FF+SNTLI IIAAD G+FS   +      +
Sbjct: 29  IFLPIFTYIMIFHVFEVSLSS-VFKDTKVLFFISNTLILIIAADYGSFSDKESQDFYGEY 88

Query: 89  TAAAKTISSPP-----------QHNLNKTVVLN----EPPNEEEEEEIII---------- 148
           T AA T+ +             + N     + N    E  N EEE+E ++          
Sbjct: 89  TVAAATMRNRADNYSPIPVLTYRENTKDGEIKNPKDVEFRNPEEEDEPMVKDIICVSPPE 148

Query: 149 ---------------------PLTTEISIPPE------FNNPRRSYQRSKSEK-EIKRVG 205
                                P+T +     E        NP + Y RSKS+K   KR+ 
Sbjct: 149 KIVRVVSEKKQRDDVAMEEYKPVTEQTLASEEACNTRNHVNPNKPYGRSKSDKPRRKRLS 208

The following BLAST results are available for this feature:

BLAST of CmUC03G056520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895571.1	1.3e-71	74.34	uncharacterized protein LOC120083777 [Benincasa hispida]	[more]
XP_008444445.1	5.9e-64	66.52	PREDICTED: 101 kDa malaria antigen-like [Cucumis melo]	[more]
XP_011657186.2	2.7e-61	66.51	uncharacterized protein LOC105435817 [Cucumis sativus] >KGN65525.1 hypothetical ...	[more]
XP_022927241.1	6.6e-39	60.70	uncharacterized protein LOC111434146 [Cucurbita moschata]	[more]
XP_023520396.1	6.2e-37	57.07	uncharacterized protein LOC111783708 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC03G056520.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC03G056520.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9V3	2.9e-64	66.52	101 kDa malaria antigen-like OS=Cucumis melo OX=3656 GN=LOC103487765 PE=4 SV=1	[more]
A0A0A0LUF0	1.3e-61	66.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435700 PE=4 SV=1	[more]
A0A6J1EH50	3.2e-39	60.70	uncharacterized protein LOC111434146 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A6J1KIQ0	2.1e-35	57.07	uncharacterized protein LOC111495597 OS=Cucurbita maxima OX=3661 GN=LOC111495597...	[more]
A0A6J1CEX1	1.9e-20	45.64	uncharacterized protein LOC111010873 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of CmUC03G056520.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30190.1	9.2e-07	32.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..203
None	No IPR available	PANTHER	PTHR35997:SF6	COTTON FIBER PROTEIN	coord: 29..75
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 104..209
None	No IPR available	PANTHER	PTHR35997:SF6	COTTON FIBER PROTEIN	coord: 104..209
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 29..75
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 184..205 e-value: 2.9E-7 score: 29.9

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC03G056520	CmUC03G056520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G056520.1-exon	CmUC03G056520.1-exon-CmU531Chr03:7172904..7173396	exon
CmUC03G056520.1-exon	CmUC03G056520.1-exon-CmU531Chr03:7173872..7174259	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G056520.1-three_prime_utr	CmUC03G056520.1-three_prime_utr-CmU531Chr03:7172904..7173097	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G056520.1-cds	CmUC03G056520.1-cds-CmU531Chr03:7173098..7173396	CDS
CmUC03G056520.1-cds	CmUC03G056520.1-cds-CmU531Chr03:7173872..7174229	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC03G056520.1-five_prime_utr	CmUC03G056520.1-five_prime_utr-CmU531Chr03:7174230..7174259	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC03G056520.1	CmUC03G056520.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane