CmUC02G049880.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC02G049880.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 37377340 .. 37378019 (+)
Sequence length424
RNA-Seq ExpressionCmUC02G049880.1
SyntenyCmUC02G049880.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCGAAAGAGATCCGCCAAAATGGGATTACATTTTTTCTTTTCAATACAGTAGTTGAATCAGGTCTCACAATGTATTTGAGGTTGTTTTGTTAGCTCAAATGATGGGTTCAAGTAAACTGAGTTTGCTTATAAGATACAAGAATTGGTTGAATGTAAGGGACTTGGTGAGACAATTTAGTCATCAATGGGAACATAACGAATGTCAAGACAATGGTTGAGGACTTGATCTTGAAGATAGGTCCAATCTATACGTGCTTTGTTCTCGTTGGAGGCAAGCACACCTGCTTCGACATTATCACACTGGACAACTAGTTTGCCAAACAACTGAAAGTCAAGCTCTTCAAGTAACTGCCGTAGTCAAGAGATTTCAGCGGAAGCATGAGCGAGGGTACGATATTCAAATTCCGTGCTATAGCCTGTTTGCTTTTTGGAAGATCAAGATACGAGAGAGGTGCTAAGGAAGACACAATATGCGGTTACCCATTTTTGATCATCAACATTAAATGCCTAGTTGGCATCAGAGAAAGCTGCAAAGAGAATCACTGGACTGAATTAAAAGACCATAAAAAATGTACCTTTCAGATATCAGAGTATTCGTTTGACGGCTTTCCAATAAACATCAGTAGGGGACTTGGGACTTCAGTGATTGAGTCGATTGACAAGCAATATCCAGCCTAG

mRNA sequence

GTCCGAAAGAGATCCGCCAAAATGGGATTACATTTTTTCTTTTCAATACAGTAGTTGAATCAGGTCTCACAATGTATTTGAGGTTGTTTTGTTAGCTCAAATGATGGGTTCAAATAGGTCCAATCTATACGTGCTTTGTTCTCGTTGGAGGCAAGCACACCTGCTTCGACATTATCACACTGGACAACTAGTTTGCCAAACAACTGAAAGTCAAGCTCTTCAAGTAACTGCCGTAGTCAAGAGATTTCAGCGGAAGCATGAGCGAGGAGAAAGCTGCAAAGAGAATCACTGGACTGAATTAAAAGACCATAAAAAATGTACCTTTCAGATATCAGAGTATTCGTTTGACGGCTTTCCAATAAACATCAGTAGGGGACTTGGGACTTCAGTGATTGAGTCGATTGACAAGCAATATCCAGCCTAG

Coding sequence (CDS)

ATGATGGGTTCAAATAGGTCCAATCTATACGTGCTTTGTTCTCGTTGGAGGCAAGCACACCTGCTTCGACATTATCACACTGGACAACTAGTTTGCCAAACAACTGAAAGTCAAGCTCTTCAAGTAACTGCCGTAGTCAAGAGATTTCAGCGGAAGCATGAGCGAGGAGAAAGCTGCAAAGAGAATCACTGGACTGAATTAAAAGACCATAAAAAATGTACCTTTCAGATATCAGAGTATTCGTTTGACGGCTTTCCAATAAACATCAGTAGGGGACTTGGGACTTCAGTGATTGAGTCGATTGACAAGCAATATCCAGCCTAG

Protein sequence

MMGSNRSNLYVLCSRWRQAHLLRHYHTGQLVCQTTESQALQVTAVVKRFQRKHERGESCKENHWTELKDHKKCTFQISEYSFDGFPINISRGLGTSVIESIDKQYPA
Homology
The following BLAST results are available for this feature:
BLAST of CmUC02G049880.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G049880.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G049880.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC02G049880.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC02G049880CmUC02G049880gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G049880.1-exonCmUC02G049880.1-exon-CmU531Chr02:37377340..37377452exon
CmUC02G049880.1-exonCmUC02G049880.1-exon-CmU531Chr02:37377576..37377729exon
CmUC02G049880.1-exonCmUC02G049880.1-exon-CmU531Chr02:37377863..37378019exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G049880.1-five_prime_utrCmUC02G049880.1-five_prime_utr-CmU531Chr02:37377340..37377439five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC02G049880.1-cdsCmUC02G049880.1-cds-CmU531Chr02:37377440..37377452CDS
CmUC02G049880.1-cdsCmUC02G049880.1-cds-CmU531Chr02:37377576..37377729CDS
CmUC02G049880.1-cdsCmUC02G049880.1-cds-CmU531Chr02:37377863..37378019CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC02G049880.1CmUC02G049880.1-proteinpolypeptide