CmUC02G029930.1 (mRNA) Watermelon (USVL531) v1

Overview


Name	CmUC02G029930.1
Type	mRNA
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like
Location	CmU531Chr02: 3741555 .. 3744371 (+)
Sequence length	1280
RNA-Seq Expression	CmUC02G029930.1
Synteny	CmUC02G029930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCAGCTCACACTCTAAACCACTCACAGATACACTTCTCAAAAGAAAAGCCATACATTTTGATTCGATTCAAAGCAATGGCAGCCACTCTTTCCGTTCGCCCCAACCGTCTTTCCGCCGGCGCAGCCTTTGCTACGCCGCCAGCTCACCGTCTCGGTTCCAACTTCATCGCAAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACTAATCTCTCGAACGCCTGCGATGACGGCCACACCGGTACAAGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTGAAGGTTCTCGGAGTTTCCGATGCGGCCTCGTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCTGCTTGCAAGGACGACCAAGAAACAGTGGCGCAGGTAGAAGGAGAATAATTTTTCTACTTCGTTTGGGGATTTTTGGTAAATTAGGGATCTAACTATTGCATCCCCTTTGATTTGAGTATTGCCATTCTGAATTTCGAAGTCCGATTGATTTGGTAACTATTCCAATGATCTCTGTGTTTCTTTTTTCTTTTGGGTACATATAATGTGATCACCATGGAGCCTGTGAGTTTCTTGAGTGAGTAGAACTTTCCTTTTGTTTTGCCTACACTATTTGGCTATTACCACTTTACCTGTATATTGTCAATAAATCTCTGACTCTAGCGACATGGTCCAATTTATGAAACCCTGTACCTTTTCTTCTAATCCCATTTTTGTTTCTTTTGCCTTCATTTTTATGCGCTTAAAGTTTATATCTGTGAGAACTGTTTCATTCATAAACTGTAAATTGAACCAGGCAAAAGGGAAGTAGAAGGAATTGGCGAGGCTAAGATGAAGAGTTAAGAAAACGTGCATGACTCTAAAATTAGATTGGAACATCGAATTCAGATCCTTGTTACCATATGAGGAGGCAGTTATGGTTTTGGACTAAATACTGTACATGGATTATTAGATTTATTTGCAGTTCAGTATTTATTTGTCACGGGCACTGGAGATAAACTCATCAAAGTTGTTTCAATTATAATGCTGCAGCAGATTGAGTACGGTTTTAATACTGTAAATTACCTCTGTTACACAATCTTACATTTATTGAAAATTTTGTTCTTGAGCATCTTTGATTTAGATTTATTCCATTTATGAAATTCAATATCTGTTTTTCACTATAATCTCAATCATTTGTGTTAAGTTCACTCATGTATGTGGAACCATCTCTGTGGATTGTTTGTCATTGCTTCTGTTATGTGTTTTAGGTTGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACAAGCAGGAAAAGTTGTGAGTAGCGGGATCCTTTATGCTGATGTCAAACCCATGAATGAGTCAAAGACTCGCTTAATGCCTCAGTGGCTGCAGTCTACAAGGAAGAACACACAATTGTCTATTGAAATGCCAACCATTAGGGATTTTGGCATACAAGCAGGTGTATATGGAGCTTTGATGGTTTTAACTTATGTAAATGGATCAACCACATCTTCTACGATGACATCCGATGGGGCTGATGTTCCTGGACTAATCTTAGCAAGTAGCTTTGGAGCTTCCTTGTATTTCATGACCAAAAGGAACGTGAAGCTTGGTAAGGAGTTCTGCTAATGCTAATTCTTTATGCTTTTAGTTCTTACGAGATTGAAAATATCCTCATGAAGTTGTAGAAAAATTGAAGGAATTGTGCGGTTTTCTGCTTGTGTATGCTGTCGAGGTTTTGTGAAATAAACCTTCATTTATTGTTCTTTACTTGATTTTAGAAAGGGGGACTTTGAAGGTTGAGGAGGAACAGGCTTTTCCCTCTATTTGCTGAGCATTTTTACTCTTGAGTCAAAATATATTATTGGAAAAATTGCAAAAACCACCCTTGAAGTATTGTGATTGTTGCAACTACACCTTCAAACTTTCCATTGTAAAAATTGAGTCATCAAACTTATACAAGTGTTAAAATTGGACCCTCAAACTTACAATAGTTGTAGAAATTGGACCCCGAAATGATAAAAACTTATTTGAGAGTTCAATTTCTATAACTTGGGAGTCCAATTTCTACGACTATTGTTAGTTTGAGGGTCCAATTTTAACACTTATATAAGTTTGAGAACTCAATTTTTACAATGGAAAGTTTGAAGTGTAGTTGCAACAATCACAATACTTCAAGGGTGGTTTTTGCAATTTTCCTATATTCTTTATTGCTACAAATGATATTTAAATTATTTTTATTACATATATTCAAGAATTTTAACCTAAATGAAATGATCTTGATTCTTGTGCACAAAAATAATGCTGAGAAATACATATCTCACATCTTGGAGTCATATATAGATCATGCAATTTTCATATGATAATATTTTCAATTAGCTCTGCTGTTCTTCTTTGCAGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGACATCGTTCCTTTCCTCGGCTTACGGTCTCCGGCCGCTGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTCTCTCTTTATTTGGTTTAGGGATGAGATAGGCAGTGGATTTAAAGTTAAAACTGCATAACAATGTAAATTCATTCACATGTTCATACATTAGCATTTTTGAGGATGTGTATCATTGCATATTGTACAAAGGGGAAACCGAACAACTCTTGTAATTTACCACTTATACAAATTCTTGACATAGTTATGAACAATTTACTGTTTAGAAAGTGTTCTGGTATATGTCTATGT

mRNA sequence

GTCCAGCTCACACTCTAAACCACTCACAGATACACTTCTCAAAAGAAAAGCCATACATTTTGATTCGATTCAAAGCAATGGCAGCCACTCTTTCCGTTCGCCCCAACCGTCTTTCCGCCGGCGCAGCCTTTGCTACGCCGCCAGCTCACCGTCTCGGTTCCAACTTCATCGCAAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACTAATCTCTCGAACGCCTGCGATGACGGCCACACCGGTACAAGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTGAAGGTTCTCGGAGTTTCCGATGCGGCCTCGTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCTGCTTGCAAGGACGACCAAGAAACAGTGGCGCAGTTTATATCTGTGAGAACTGTTTCATTCATAAACTTTCAGTATTTATTTGTCACGGGCACTGGAGATAAACTCATCAAAGTTGTTTCAATTATAATGCTGCAGCAGATTGAGTACGGTTTTAATACTGTTGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACAAGCAGGAAAAGTTGTGAGTAGCGGGATCCTTTATGCTGATGTCAAACCCATGAATGAGTCAAAGACTCGCTTAATGCCTCAGTGGCTGCAGTCTACAAGGAAGAACACACAATTGTCTATTGAAATGCCAACCATTAGGGATTTTGGCATACAAGCAGGTGTATATGGAGCTTTGATGGTTTTAACTTATGTAAATGGATCAACCACATCTTCTACGATGACATCCGATGGGGCTGATGTTCCTGGACTAATCTTAGCAAGTAGCTTTGGAGCTTCCTTGTATTTCATGACCAAAAGGAACGTGAAGCTTGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGACATCGTTCCTTTCCTCGGCTTACGGTCTCCGGCCGCTGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTCTCTCTTTATTTGGTTTAGGGATGAGATAGGCAGTGGATTTAAAGTTAAAACTGCATAACAATGTAAATTCATTCACATGTTCATACATTAGCATTTTTGAGGATGTGTATCATTGCATATTGTACAAAGGGGAAACCGAACAACTCTTGTAATTTACCACTTATACAAATTCTTGACATAGTTATGAACAATTTACTGTTTAGAAAGTGTTCTGGTATATGTCTATGT

Coding sequence (CDS)

ATGGCAGCCACTCTTTCCGTTCGCCCCAACCGTCTTTCCGCCGGCGCAGCCTTTGCTACGCCGCCAGCTCACCGTCTCGGTTCCAACTTCATCGCAAAATTGAGTCCATGGAAAGGCGTTAGCATTTCACTAATCTCTCGAACGCCTGCGATGACGGCCACACCGGTACAAGCCGGCTCGAGAGCCGATGACTCTGCGCCGTTCGAGATGTCCGTGGAAAACGCTCTGAAGGTTCTCGGAGTTTCCGATGCGGCCTCGTTCGATGACATTCTTCGTGCTAGGAATTCGATTCTGGCTGCTTGCAAGGACGACCAAGAAACAGTGGCGCAGTTTATATCTGTGAGAACTGTTTCATTCATAAACTTTCAGTATTTATTTGTCACGGGCACTGGAGATAAACTCATCAAAGTTGTTTCAATTATAATGCTGCAGCAGATTGAGTACGGTTTTAATACTGTTGAGGCTGCATATGACATGTTGCTAATGCGGAGCTTGACTCAGCGACAAGCAGGAAAAGTTGTGAGTAGCGGGATCCTTTATGCTGATGTCAAACCCATGAATGAGTCAAAGACTCGCTTAATGCCTCAGTGGCTGCAGTCTACAAGGAAGAACACACAATTGTCTATTGAAATGCCAACCATTAGGGATTTTGGCATACAAGCAGGTGTATATGGAGCTTTGATGGTTTTAACTTATGTAAATGGATCAACCACATCTTCTACGATGACATCCGATGGGGCTGATGTTCCTGGACTAATCTTAGCAAGTAGCTTTGGAGCTTCCTTGTATTTCATGACCAAAAGGAACGTGAAGCTTGGAAAAGCATCCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGACATCGTTCCTTTCCTCGGCTTACGGTCTCCGGCCGCTGTGATAAGTGAATTTATCCTCTTCTCTCAATTTTTGGTCTCTCTTTATTTGGTTTAG

Protein sequence

MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGSRADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFINFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILYADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSSTMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVDIVPFLGLRSPAAVISEFILFSQFLVSLYLV

Homology

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BLAST of CmUC02G029930.1 vs. NCBI nr
Match: XP_038887421.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-125
Identity = 256/329 (77.81%), Postives = 266/329 (80.85%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN LS GAAF TPP HRL SNFI KLS WKGVSIS  SRTP MTATPVQAGS
Sbjct: 1   MAATLSVRPNNLSGGAAFPTPPCHRLRSNFIGKLSLWKGVSISQTSRTPTMTATPVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAAC DDQETVAQ          
Sbjct: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACNDDQETVAQ---------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                           VEAAYDMLLMRSLTQR+AGKVVSSGILY
Sbjct: 121 --------------------------------VEAAYDMLLMRSLTQRRAGKVVSSGILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           AD KP+N+ K RLMPQWL+STRKNTQLSIE PTI +FGIQAGVYGALMVLTYVNG+ TS+
Sbjct: 181 ADAKPINDPKIRLMPQWLKSTRKNTQLSIETPTISNFGIQAGVYGALMVLTYVNGAATST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
           TMT DGADVPGLILASS GASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD
Sbjct: 241 TMTYDGADVPGLILASSCGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 287

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           +VPFLGLRSPAA+ISEFI+FSQ  VSLYL
Sbjct: 301 VVPFLGLRSPAAMISEFIIFSQLFVSLYL 287

[Close]

BLAST of CmUC02G029930.1 vs. NCBI nr
Match: XP_022135964.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-120
Identity = 248/329 (75.38%), Postives = 262/329 (79.64%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN  S GAAF TPPAHR GSNFI KLS WK V IS ISRTPAM ATPVQAGS
Sbjct: 1   MAATLSVRPNGFSGGAAFPTPPAHRPGSNFIGKLSLWKRVGISHISRTPAMPATPVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDSAPFEMSVENALKVLGVS+ ASFDDILRARNSILAACKDD+ETVAQ          
Sbjct: 61  RADDSAPFEMSVENALKVLGVSEEASFDDILRARNSILAACKDDEETVAQ---------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                           VEAAYDMLLMRSLTQRQAGKVVSSGILY
Sbjct: 121 --------------------------------VEAAYDMLLMRSLTQRQAGKVVSSGILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK ++E +   MPQWLQ+T KNTQLS+E PTI DF IQAGVYGALMVLTY NG++TS+
Sbjct: 181 ADVKSISEPQIAPMPQWLQATMKNTQLSVETPTISDFSIQAGVYGALMVLTYANGASTST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            MT  GAD+PGLILASSFGASLYFMTKRN+KLGKASI+V+GGLVAGAVVGSAVENWLQVD
Sbjct: 241 MMTYAGADLPGLILASSFGASLYFMTKRNMKLGKASIVVVGGLVAGAVVGSAVENWLQVD 287

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGLRSPAAVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 287

[Close]

BLAST of CmUC02G029930.1 vs. NCBI nr
Match: XP_008447928.1 (PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-117
Identity = 247/329 (75.08%), Postives = 260/329 (79.03%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN LS GAAF T PAHRL S F+ K +P KGVSIS + +TPAMTAT VQAGS
Sbjct: 1   MAATLSVRPNPLSGGAAFPTLPAHRLVSTFLGKFTPLKGVSISQVFQTPAMTATLVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDS PFEMSV+NALKVLGVSDAASFDDILRARNSILA CKD++ETVAQ          
Sbjct: 61  RADDSTPFEMSVDNALKVLGVSDAASFDDILRARNSILADCKDEEETVAQ---------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                           +EAAYDMLLMRSLTQR+AGKVVSS ILY
Sbjct: 121 --------------------------------IEAAYDMLLMRSLTQRRAGKVVSSRILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK + ESKTRLMPQWLQSTRKNTQLSIE PTI DFGIQA VYGALMVLTYVNG+ TS+
Sbjct: 181 ADVKHIKESKTRLMPQWLQSTRKNTQLSIETPTISDFGIQAVVYGALMVLTYVNGAATST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            M  DGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGS VENWLQV 
Sbjct: 241 MMKYDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSTVENWLQVG 287

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGL+SP AVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLQSPFAVISEFILFSQFLVSLYL 287

[Close]

BLAST of CmUC02G029930.1 vs. NCBI nr
Match: XP_016900466.1 (PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 5.9e-108
Identity = 233/329 (70.82%), Postives = 245/329 (74.47%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN LS GAAF T PAHRL S F+ K +P KGVSIS + +TPAMTAT VQAGS
Sbjct: 1   MAATLSVRPNPLSGGAAFPTLPAHRLVSTFLGKFTPLKGVSISQVFQTPAMTATLVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDS PFEMSV+NALKVLGVSDAASFDDILRARNSILA CKD++ETVA           
Sbjct: 61  RADDSTPFEMSVDNALKVLGVSDAASFDDILRARNSILADCKDEEETVA----------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                                         QR+AGKVVSS ILY
Sbjct: 121 ----------------------------------------------QRRAGKVVSSRILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK + ESKTRLMPQWLQSTRKNTQLSIE PTI DFGIQA VYGALMVLTYVNG+ TS+
Sbjct: 181 ADVKHIKESKTRLMPQWLQSTRKNTQLSIETPTISDFGIQAVVYGALMVLTYVNGAATST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            M  DGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGS VENWLQV 
Sbjct: 241 MMKYDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSTVENWLQVG 272

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGL+SP AVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLQSPFAVISEFILFSQFLVSLYL 272

[Close]

BLAST of CmUC02G029930.1 vs. NCBI nr
Match: XP_010086829.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Morus notabilis] >EXB24027.1 hypothetical protein L484_006058 [Morus notabilis])

HSP 1 Score: 359.0 bits (920), Expect = 4.4e-95
Identity = 211/337 (62.61%), Postives = 238/337 (70.62%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIA----KLSPWKG----VSISLISRTPAMT 60
           MAATLSVRPNRLS G +  +PP  R G         K  PW G      ++L   TPA  
Sbjct: 1   MAATLSVRPNRLSGGYSLPSPPHRRTGPVHFRRPADKFEPWTGSIAPSRLALAKTTPA-- 60

Query: 61  ATPVQAGSRADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFI 120
             PV+AGSRADDSAPFEMSVENALK+LGVS+ ASFDDILRA+NSI+AACKDDQE +AQ  
Sbjct: 61  --PVRAGSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNSIVAACKDDQEAIAQ-- 120

Query: 121 SVRTVSFINFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGK 180
                                                   VEAAYDMLLMRSLTQR+AGK
Sbjct: 121 ----------------------------------------VEAAYDMLLMRSLTQRRAGK 180

Query: 181 VVSSGILYADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTY 240
           VVSS I YADVKP++   +  MPQWLQ++ KN+ + IE P+  D G++AGVYGALMVLTY
Sbjct: 181 VVSSRIRYADVKPVSSPGSGSMPQWLQASVKNSPVLIETPSKGDLGLKAGVYGALMVLTY 240

Query: 241 VNGSTTSSTMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSA 300
           VNG++TSS +   GADVPGLILA SFGASLYFMTK+NVKLGKA+II IGGLVAGAVVGSA
Sbjct: 241 VNGTSTSSAVPYAGADVPGLILAGSFGASLYFMTKKNVKLGKATIITIGGLVAGAVVGSA 291

Query: 301 VENWLQVDIVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           VENWLQVDIVPFLGL SPAAV+SE IL SQFLVSLYL
Sbjct: 301 VENWLQVDIVPFLGLHSPAAVVSEVILISQFLVSLYL 291

[Close]

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL
Match: A0A6J1C2Y7 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007789 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 8.6e-121
Identity = 248/329 (75.38%), Postives = 262/329 (79.64%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN  S GAAF TPPAHR GSNFI KLS WK V IS ISRTPAM ATPVQAGS
Sbjct: 1   MAATLSVRPNGFSGGAAFPTPPAHRPGSNFIGKLSLWKRVGISHISRTPAMPATPVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDSAPFEMSVENALKVLGVS+ ASFDDILRARNSILAACKDD+ETVAQ          
Sbjct: 61  RADDSAPFEMSVENALKVLGVSEEASFDDILRARNSILAACKDDEETVAQ---------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                           VEAAYDMLLMRSLTQRQAGKVVSSGILY
Sbjct: 121 --------------------------------VEAAYDMLLMRSLTQRQAGKVVSSGILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK ++E +   MPQWLQ+T KNTQLS+E PTI DF IQAGVYGALMVLTY NG++TS+
Sbjct: 181 ADVKSISEPQIAPMPQWLQATMKNTQLSVETPTISDFSIQAGVYGALMVLTYANGASTST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            MT  GAD+PGLILASSFGASLYFMTKRN+KLGKASI+V+GGLVAGAVVGSAVENWLQVD
Sbjct: 241 MMTYAGADLPGLILASSFGASLYFMTKRNMKLGKASIVVVGGLVAGAVVGSAVENWLQVD 287

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGLRSPAAVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 287

[Close]

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL
Match: A0A1S3BIJ0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490266 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 5.2e-118
Identity = 247/329 (75.08%), Postives = 260/329 (79.03%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN LS GAAF T PAHRL S F+ K +P KGVSIS + +TPAMTAT VQAGS
Sbjct: 1   MAATLSVRPNPLSGGAAFPTLPAHRLVSTFLGKFTPLKGVSISQVFQTPAMTATLVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDS PFEMSV+NALKVLGVSDAASFDDILRARNSILA CKD++ETVAQ          
Sbjct: 61  RADDSTPFEMSVDNALKVLGVSDAASFDDILRARNSILADCKDEEETVAQ---------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                           +EAAYDMLLMRSLTQR+AGKVVSS ILY
Sbjct: 121 --------------------------------IEAAYDMLLMRSLTQRRAGKVVSSRILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK + ESKTRLMPQWLQSTRKNTQLSIE PTI DFGIQA VYGALMVLTYVNG+ TS+
Sbjct: 181 ADVKHIKESKTRLMPQWLQSTRKNTQLSIETPTISDFGIQAVVYGALMVLTYVNGAATST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            M  DGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGS VENWLQV 
Sbjct: 241 MMKYDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSTVENWLQVG 287

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGL+SP AVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLQSPFAVISEFILFSQFLVSLYL 287

[Close]

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL
Match: A0A1S4DWV9 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490266 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.9e-108
Identity = 233/329 (70.82%), Postives = 245/329 (74.47%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIAKLSPWKGVSISLISRTPAMTATPVQAGS 60
           MAATLSVRPN LS GAAF T PAHRL S F+ K +P KGVSIS + +TPAMTAT VQAGS
Sbjct: 1   MAATLSVRPNPLSGGAAFPTLPAHRLVSTFLGKFTPLKGVSISQVFQTPAMTATLVQAGS 60

Query: 61  RADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTVSFI 120
           RADDS PFEMSV+NALKVLGVSDAASFDDILRARNSILA CKD++ETVA           
Sbjct: 61  RADDSTPFEMSVDNALKVLGVSDAASFDDILRARNSILADCKDEEETVA----------- 120

Query: 121 NFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILY 180
                                                         QR+AGKVVSS ILY
Sbjct: 121 ----------------------------------------------QRRAGKVVSSRILY 180

Query: 181 ADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSS 240
           ADVK + ESKTRLMPQWLQSTRKNTQLSIE PTI DFGIQA VYGALMVLTYVNG+ TS+
Sbjct: 181 ADVKHIKESKTRLMPQWLQSTRKNTQLSIETPTISDFGIQAVVYGALMVLTYVNGAATST 240

Query: 241 TMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWLQVD 300
            M  DGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGS VENWLQV 
Sbjct: 241 MMKYDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSTVENWLQVG 272

Query: 301 IVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           IVPFLGL+SP AVISEFILFSQFLVSLYL
Sbjct: 301 IVPFLGLQSPFAVISEFILFSQFLVSLYL 272

[Close]

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL
Match: W9QWT4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006058 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 2.1e-95
Identity = 211/337 (62.61%), Postives = 238/337 (70.62%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFIA----KLSPWKG----VSISLISRTPAMT 60
           MAATLSVRPNRLS G +  +PP  R G         K  PW G      ++L   TPA  
Sbjct: 1   MAATLSVRPNRLSGGYSLPSPPHRRTGPVHFRRPADKFEPWTGSIAPSRLALAKTTPA-- 60

Query: 61  ATPVQAGSRADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFI 120
             PV+AGSRADDSAPFEMSVENALK+LGVS+ ASFDDILRA+NSI+AACKDDQE +AQ  
Sbjct: 61  --PVRAGSRADDSAPFEMSVENALKLLGVSEGASFDDILRAKNSIVAACKDDQEAIAQ-- 120

Query: 121 SVRTVSFINFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGK 180
                                                   VEAAYDMLLMRSLTQR+AGK
Sbjct: 121 ----------------------------------------VEAAYDMLLMRSLTQRRAGK 180

Query: 181 VVSSGILYADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTY 240
           VVSS I YADVKP++   +  MPQWLQ++ KN+ + IE P+  D G++AGVYGALMVLTY
Sbjct: 181 VVSSRIRYADVKPVSSPGSGSMPQWLQASVKNSPVLIETPSKGDLGLKAGVYGALMVLTY 240

Query: 241 VNGSTTSSTMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSA 300
           VNG++TSS +   GADVPGLILA SFGASLYFMTK+NVKLGKA+II IGGLVAGAVVGSA
Sbjct: 241 VNGTSTSSAVPYAGADVPGLILAGSFGASLYFMTKKNVKLGKATIITIGGLVAGAVVGSA 291

Query: 301 VENWLQVDIVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           VENWLQVDIVPFLGL SPAAV+SE IL SQFLVSLYL
Sbjct: 301 VENWLQVDIVPFLGLHSPAAVVSEVILISQFLVSLYL 291

[Close]

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL
Match: A0A2I4EWX0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108993423 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.8e-95
Identity = 208/332 (62.65%), Postives = 238/332 (71.69%), Query Frame = 0


Query: 1   MAATLSVRPNRLSAGAAFATPPAHRLGSNFI---AKLSPWKGVSISLISRTPAMTATPVQ 60
           MAATLSVRPNR +AG+ +  PPA R   +     AK  PW+GVS + +  +     TPVQ
Sbjct: 1   MAATLSVRPNRFAAGSPYPRPPARRPVPSHTGRPAKNEPWRGVSTATVIPS---RRTPVQ 60

Query: 61  AGSRADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRTV 120
           AGSRADDSAP E SVENALK+LGVS+ ASFD+ILRA+NS+LAACKDDQE +AQ       
Sbjct: 61  AGSRADDSAPSEKSVENALKLLGVSEGASFDEILRAKNSVLAACKDDQEAIAQ------- 120

Query: 121 SFINFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSSG 180
                                              VEAAYDMLLM+SLTQR+AGKVVSSG
Sbjct: 121 -----------------------------------VEAAYDMLLMQSLTQRRAGKVVSSG 180

Query: 181 ILYADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGST 240
           I YADVKP++  +   MPQWLQ+  KN  +SIE P+  D GIQAGVYGALMVLTYVNG++
Sbjct: 181 IRYADVKPVSAPRMGSMPQWLQAAVKNPPVSIETPSSSDLGIQAGVYGALMVLTYVNGTS 240

Query: 241 TSSTMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVENWL 300
           +S      GADVPGLILA SFGASLYFMTK+NVKLGKA++I IGGLVAGAVVGSAVE+WL
Sbjct: 241 SSLAAPYAGADVPGLILAGSFGASLYFMTKQNVKLGKATVITIGGLVAGAVVGSAVESWL 287

Query: 301 QVDIVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           QVDIVPFLG+ SPAAVISEFILFSQFLVSL L
Sbjct: 301 QVDIVPFLGINSPAAVISEFILFSQFLVSLCL 287

[Close]

BLAST of CmUC02G029930.1 vs. TAIR 10
Match: AT2G20920.1 (Protein of unknown function (DUF3353) )

HSP 1 Score: 285.0 bits (728), Expect = 7.5e-77
Identity = 181/334 (54.19%), Postives = 214/334 (64.07%), Query Frame = 0


Query: 2   AATLSVRPNRLSAGAAFATPPAHRL----GSNFIA-KLSPWKGVSISLISRTPAMTATPV 61
           AA  + RPNRLS  +A +  P H L       F + K   W+  +I L +R       P 
Sbjct: 4   AALSAARPNRLS--SASSDVPLHPLYLPTKLQFPSRKTQLWRSAAILLPTR---RRCAPP 63

Query: 62  QAGSRADDSAPFEMSVENALKVLGVSDAASFDDILRARNSILAACKDDQETVAQFISVRT 121
           +A SRADDS PF+MSVE ALKVLGVS+ ASFD+ILRA+ SILA+ KDD   ++Q      
Sbjct: 64  RASSRADDSPPFDMSVETALKVLGVSEGASFDEILRAKKSILASRKDDPNAISQ------ 123

Query: 122 VSFINFQYLFVTGTGDKLIKVVSIIMLQQIEYGFNTVEAAYDMLLMRSLTQRQAGKVVSS 181
                                                EAAYDMLLM+SL QR+AGKVVS+
Sbjct: 124 ------------------------------------AEAAYDMLLMQSLNQRRAGKVVSN 183

Query: 182 GILYADVKPMNESKTRLMPQWLQSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGS 241
            I YADVK  N   T  + QW+    KN  +S++MP+  D GIQAGVYGA+MVLTYVNGS
Sbjct: 184 NIRYADVKSSNPLGTSTVTQWM----KNPPVSVDMPSTSDLGIQAGVYGAMMVLTYVNGS 243

Query: 242 T-TSSTMTSDGADVPGLILASSFGASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAVEN 301
           +  SS M   GADVPGLILASSFGASLYFMTK+ VKLGKA+ +  GGLVAGAVVGSA+E 
Sbjct: 244 SFESSGMPYAGADVPGLILASSFGASLYFMTKKKVKLGKAAALTAGGLVAGAVVGSAIET 286

Query: 302 WLQVDIVPFLGLRSPAAVISEFILFSQFLVSLYL 330
           WL VD+VPFLGL SPAAV+SEFI+FSQFLVSL L
Sbjct: 304 WLHVDVVPFLGLHSPAAVVSEFIVFSQFLVSLCL 286

[Close]

BLAST of CmUC02G029930.1 vs. TAIR 10
Match: AT5G23040.1 (Protein of unknown function (DUF3353) )

HSP 1 Score: 44.3 bits (103), Expect = 2.2e-04
Identity = 42/155 (27.10%), Postives = 73/155 (47.10%), Query Frame = 0


Query: 142 MLQQI---EYGFNTVEAAYDMLLMRSLTQRQAGKVVSSGILYADVKPMNESKTRLMPQWL 201
           +LQQ    E    ++E A++ LLM S  +R+  K+        ++K   + K    P WL
Sbjct: 91  LLQQYAGHERSEESIEGAFEKLLMSSFIRRKKTKI--------NLKSKLKKKVEESPPWL 150

Query: 202 QSTRKNTQLSIEMPTIRDFGIQAGVYGALMVLTYVNGSTTSSTMTSDGADVPGLILASSF 261
           ++        +EMP +        ++  L +  ++ G   S   +++G   P   +A S 
Sbjct: 151 KALLD----FVEMPPMDT------IFRRLFLFAFMGG--WSIMNSAEGG--PAFQVAVSL 210

Query: 262 GASLYFMTKRNVKLGKASIIVIGGLVAGAVVGSAV 294
            A +YF+ ++   LG+A +I IG LVAG   GS +
Sbjct: 211 AACVYFLNEKTKSLGRACLIGIGALVAGWFCGSLI 223

The following BLAST results are available for this feature:

BLAST of CmUC02G029930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887421.1	1.1e-125	77.81	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Benincasa hispida]	[more]
XP_022135964.1	1.8e-120	75.38	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Momordica charantia]	[more]
XP_008447928.1	1.1e-117	75.08	PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1...	[more]
XP_016900466.1	5.9e-108	70.82	PREDICTED: protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2...	[more]
XP_010086829.1	4.4e-95	62.61	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Morus notabilis] >EXB2402...	[more]

BLAST of CmUC02G029930.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC02G029930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2Y7	8.6e-121	75.38	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Momordica charanti...	[more]
A0A1S3BIJ0	5.2e-118	75.08	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucumis...	[more]
A0A1S4DWV9	2.9e-108	70.82	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 OS=Cucumis...	[more]
W9QWT4	2.1e-95	62.61	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006058 PE=4 SV=1	[more]
A0A2I4EWX0	2.8e-95	62.65	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Juglans regia OX=5...	[more]

BLAST of CmUC02G029930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20920.1	7.5e-77	54.19	Protein of unknown function (DUF3353)	[more]
AT5G23040.1	2.2e-04	27.10	Protein of unknown function (DUF3353)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PFAM	PF11833	CPP1-like	coord: 151..329 e-value: 2.4E-45 score: 154.6
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PANTHER	PTHR33372	FAMILY NOT NAMED	coord: 151..329
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PANTHER	PTHR33372	FAMILY NOT NAMED	coord: 1..110
None	No IPR available	PANTHER	PTHR33372:SF10	SLR1918 PROTEIN	coord: 1..110
None	No IPR available	PANTHER	PTHR33372:SF10	SLR1918 PROTEIN	coord: 151..329

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmUC02G029930	CmUC02G029930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G029930.1-exon	CmUC02G029930.1-exon-CmU531Chr02:3741555..3741961	exon
CmUC02G029930.1-exon	CmUC02G029930.1-exon-CmU531Chr02:3742335..3742368	exon
CmUC02G029930.1-exon	CmUC02G029930.1-exon-CmU531Chr02:3742551..3742642	exon
CmUC02G029930.1-exon	CmUC02G029930.1-exon-CmU531Chr02:3742837..3743197	exon
CmUC02G029930.1-exon	CmUC02G029930.1-exon-CmU531Chr02:3743986..3744371	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G029930.1-five_prime_utr	CmUC02G029930.1-five_prime_utr-CmU531Chr02:3741555..3741631	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G029930.1-cds	CmUC02G029930.1-cds-CmU531Chr02:3741632..3741961	CDS
CmUC02G029930.1-cds	CmUC02G029930.1-cds-CmU531Chr02:3742335..3742368	CDS
CmUC02G029930.1-cds	CmUC02G029930.1-cds-CmU531Chr02:3742551..3742642	CDS
CmUC02G029930.1-cds	CmUC02G029930.1-cds-CmU531Chr02:3742837..3743197	CDS
CmUC02G029930.1-cds	CmUC02G029930.1-cds-CmU531Chr02:3743986..3744161	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmUC02G029930.1-three_prime_utr	CmUC02G029930.1-three_prime_utr-CmU531Chr02:3744162..3744371	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmUC02G029930.1	CmUC02G029930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane