CmUC01G024640.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC01G024640.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr01: 36093079 .. 36093695 (-)
Sequence length294
RNA-Seq ExpressionCmUC01G024640.1
SyntenyCmUC01G024640.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGCGATAAACAACATTGGGTTGAAAAGGAATCAATGCCTATTGAGGACAAACAAGCTCCTAGGTTGGATAGATTTGATGTTATCGTTAATGCAGCGTCTTGGTATAATTTATCAAATTAATTTTGTTATTATCCTTCCTCGGGTATTAATTTCAGTTGGAATGCATTTTTCCAGTTCTAGGGTTTGGTTCTAGAGCGAACATCTTGAAATTGCGTCTAAATTCGTATCTTGATGAAATTATAGCTTTGTAACTATCCAGAAATCAACGAAAAGTAGGGTTTCTTTGTTGAAAAAGGAAAACAATAAGGCATATTGCAATCTAATTAAAGTCGAAAAAAGAACACAGCCGACGCGGAGAGTTCAATCTGAATAAAAACAAACACACATGCCTTTTCTTGAAACATTGTGAGGGTTTACGTTATAGTCGAAAAAACGTACCTGGTATCGAAGAACTGGGAGGATGCAAGTTCATACAAGTTGTGGAAGCTGAAACAGAGGCAAATGCGGCCAGAAACCCTCGAGAAATCCAAGCTACGGTGCGAGCGAGAGATGGGTCCGTTAGAGATGAGGGTGAGATGATTCACGAGCAAAAGAGAAAGAGAGAGAGATGA

mRNA sequence

ATGTTGTGCGATAAACAACATTGGGTTGAAAAGGAATCAATGCCTATTGAGGACAAACAAGCTCCTAGGTTGGATAGATTTGATGTTATCGTTAATGCAGCGTCTTGTCGAAAAAACGTACCTGGTATCGAAGAACTGGGAGGATGCAAGTTCATACAAGTTGTGGAAGCTGAAACAGAGGCAAATGCGGCCAGAAACCCTCGAGAAATCCAAGCTACGGTGCGAGCGAGAGATGGGTCCGTTAGAGATGAGGGTGAGATGATTCACGAGCAAAAGAGAAAGAGAGAGAGATGA

Coding sequence (CDS)

ATGTTGTGCGATAAACAACATTGGGTTGAAAAGGAATCAATGCCTATTGAGGACAAACAAGCTCCTAGGTTGGATAGATTTGATGTTATCGTTAATGCAGCGTCTTGTCGAAAAAACGTACCTGGTATCGAAGAACTGGGAGGATGCAAGTTCATACAAGTTGTGGAAGCTGAAACAGAGGCAAATGCGGCCAGAAACCCTCGAGAAATCCAAGCTACGGTGCGAGCGAGAGATGGGTCCGTTAGAGATGAGGGTGAGATGATTCACGAGCAAAAGAGAAAGAGAGAGAGATGA

Protein sequence

MLCDKQHWVEKESMPIEDKQAPRLDRFDVIVNAASCRKNVPGIEELGGCKFIQVVEAETEANAARNPREIQATVRARDGSVRDEGEMIHEQKRKRER
Homology
The following BLAST results are available for this feature:
BLAST of CmUC01G024640.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC01G024640.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC01G024640.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC01G024640.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..97

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC01G024640CmUC01G024640gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC01G024640.1-exonCmUC01G024640.1-exon-CmU531Chr01:36093079..36093265exon
CmUC01G024640.1-exonCmUC01G024640.1-exon-CmU531Chr01:36093589..36093695exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC01G024640.1-cdsCmUC01G024640.1-cds-CmU531Chr01:36093079..36093265CDS
CmUC01G024640.1-cdsCmUC01G024640.1-cds-CmU531Chr01:36093589..36093695CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC01G024640.1CmUC01G024640.1-proteinpolypeptide