CmUC01G013340.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC01G013340.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLEA_2 domain-containing protein
LocationCmU531Chr01: 26509399 .. 26510440 (+)
Sequence length630
RNA-Seq ExpressionCmUC01G013340.1
SyntenyCmUC01G013340.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGGTATAAATATTTGACTTTTTGAGAAAGTGTTTGGAATACTTTTATGAATTGTTTAATTTAAACGATAAATTCTTTTAGAAAAAATACAAATGTTTGGCAACCATTTAAATATATTTCGAAGACCATTAAAGTTTTTGTTTTAAATAGTTTTAAGTTAATTATCCAAACATGCATAAGACAGATATACTAAAAACATACAAACGTTGTTAGGTTTTGTTGACGTCAAAGAATAAATTGGTTGGATTTACCTCAGTTTTAACCAAAGTTACTAACATGATAACCTTTTTATTTTTTTGTTTTTAGATTCTTAATTTCCTTTTGTTGTCTCTTCTTTAATTCTAAGGGTTTTTTGTTTTTCAAAATCTAAGCCAAGATTTGTCTCTCTAAAACTTTATGGCTCTGTTCGTATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

mRNA sequence

ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Coding sequence (CDS)

ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Protein sequence

MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL
Homology
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_038895458.1 (uncharacterized protein At1g08160-like [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 9.6e-80
Identity = 162/217 (74.65%), Postives = 179/217 (82.49%), Query Frame = 0

Query: 1   MRSTIATTQGVTSSS--------AAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALA 60
           MRST  TTQG +SSS        A+ R   ++HG T KRT++IRIIGRSLL VIFLV +A
Sbjct: 1   MRST--TTQGESSSSSTSSSVIRASNRSSYRRHG-TVKRTRIIRIIGRSLLCVIFLVGVA 60

Query: 61  ILTCWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIV 120
           ILTCWL+VFPKTPRL VETGKVT  GST+  LNATI F+IK+ NPNKRASLHMDSMKMIV
Sbjct: 61  ILTCWLIVFPKTPRLRVETGKVTADGSTNRKLNATIVFTIKSYNPNKRASLHMDSMKMIV 120

Query: 121 NCNMGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYIL 180
           N  MG+PF S IPTF LMP+NET+L PV+ VNFIYPFGRPV S WI LELRF AKISYI 
Sbjct: 121 NDYMGQPFYSAIPTFTLMPRNETVLTPVIRVNFIYPFGRPVHSGWIHLELRFSAKISYIF 180

Query: 181 NRWTSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           N+WTSKPRLLEIYC+HLWLKINDSTPNFDNTKCKVDL
Sbjct: 181 NKWTSKPRLLEIYCNHLWLKINDSTPNFDNTKCKVDL 214

BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_008462391.1 (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 3.9e-73
Identity = 147/212 (69.34%), Postives = 169/212 (79.72%), Query Frame = 0

Query: 1   MRSTIATTQGVTSS---SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCW 60
           MRST    +  +SS   +  +  YRQ+H TT KRT++IRIIGRSLL VI  +++AI+TCW
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETT-KRTRIIRIIGRSLLCVIIFLSVAIITCW 60

Query: 61  LVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMG 120
           LVVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS++MDSMKMIV   MG
Sbjct: 61  LVVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMG 120

Query: 121 KPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTS 180
            PF S IPTF LMP+NET+ N  V VN IYPFGRPV SDWI LELRF AK+SYI+NRW S
Sbjct: 121 LPFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKS 180

Query: 181 KPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           KPRLLEIYCDHLWLKINDSTPNFD TKCKVD+
Sbjct: 181 KPRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_011648453.2 (uncharacterized protein LOC105434468 [Cucumis sativus] >KGN64863.1 hypothetical protein Csa_022777 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 8.7e-73
Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 0

Query: 1   MRSTIATTQGVTSS--SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 60
           MRST    +G +SS   A +R + +Q  TT KRT++IRIIGRSLL VI  +++AI+TCWL
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETT-KRTRIIRIIGRSLLSVIIFLSVAIITCWL 60

Query: 61  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 120
           VVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS+HMDS+KMIV+  MG 
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120

Query: 121 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 180
           PF STIPTF LMP+NE + N  V VNF+YPFGRPV SDW+ LELRF A++SYI+NRW SK
Sbjct: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180

Query: 181 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRLLEIYCDHLWL+INDSTPNFD TKC+VDL
Sbjct: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_038896075.1 (uncharacterized protein LOC120084246 [Benincasa hispida])

HSP 1 Score: 247.7 bits (631), Expect = 9.0e-62
Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 0

Query: 53  ILTCWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIV 112
           +LTCWLVV PKTPRLMVE+GKVT   ST+  LNATI FSIK+ NPNKRAS+HMDSMKMIV
Sbjct: 1   MLTCWLVVIPKTPRLMVESGKVTADSSTNRKLNATIVFSIKSHNPNKRASIHMDSMKMIV 60

Query: 113 NCNMGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYIL 172
             ++G+PF S IPTF LMPQNET+ NP V V+FIYPFGR V  DWIRLELRF AKISYIL
Sbjct: 61  KDDLGRPFYSDIPTFTLMPQNETVFNPTVHVHFIYPFGRRVLPDWIRLELRFSAKISYIL 120

Query: 173 NRWTSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           N+WTSK RL+EIYC HLW KIN +TPNFD+TKC+VDL
Sbjct: 121 NKWTSKRRLMEIYCHHLWFKINGTTPNFDDTKCEVDL 157

BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_011654120.1 (uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical protein Csa_022684 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 2.6e-61
Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 0

Query: 3   STIATTQGVTSSS----AAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 62
           +T  TTQG  SSS    A +R   +QHG  AKRT+VIRIIGRSLL  I L+ +AILTCW 
Sbjct: 6   TTTTTTQGEASSSSIIRAPKRGAYRQHG-IAKRTRVIRIIGRSLLCAIMLLGIAILTCWF 65

Query: 63  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 122
           VV P+TP+LMVE+G+VT   ST   LNATI F+I++ NPNKRAS+++DSMKM V   M  
Sbjct: 66  VVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSV 125

Query: 123 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 182
           PF S IP F + P+N T+L P + VN IYPFGRP+ + WI +EL F AK+SYI NRW SK
Sbjct: 126 PFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASK 185

Query: 183 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRL+EIYC+H W KI+DS PNFDN KC+VDL
Sbjct: 186 PRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

BLAST of CmUC01G013340.1 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.0e-04
Identity = 50/183 (27.32%), Postives = 77/183 (42.08%), Query Frame = 0

Query: 37  IIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVT--PTGSTHNVLNATIAFSIKT 96
           I+   LLG+  LV LAIL  +L + PK     VE   V     G+  + +NA  ++ IK+
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 97  SNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNET-ILNPVVDVNFIY------ 156
            NP K  S+   SM++    +        I  F   P+NET I   +V  N         
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 157 PFGRPVPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDST-PNFDNTKCK 210
                     I +E+   A++SY    + S+ R L+  C  + + +  S+   F    CK
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 220

BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A1S3CGU2 (uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73
Identity = 147/212 (69.34%), Postives = 169/212 (79.72%), Query Frame = 0

Query: 1   MRSTIATTQGVTSS---SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCW 60
           MRST    +  +SS   +  +  YRQ+H TT KRT++IRIIGRSLL VI  +++AI+TCW
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETT-KRTRIIRIIGRSLLCVIIFLSVAIITCW 60

Query: 61  LVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMG 120
           LVVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS++MDSMKMIV   MG
Sbjct: 61  LVVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMG 120

Query: 121 KPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTS 180
            PF S IPTF LMP+NET+ N  V VN IYPFGRPV SDWI LELRF AK+SYI+NRW S
Sbjct: 121 LPFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKS 180

Query: 181 KPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           KPRLLEIYCDHLWLKINDSTPNFD TKCKVD+
Sbjct: 181 KPRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A0A0LSU5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.2e-73
Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 0

Query: 1   MRSTIATTQGVTSS--SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 60
           MRST    +G +SS   A +R + +Q  TT KRT++IRIIGRSLL VI  +++AI+TCWL
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETT-KRTRIIRIIGRSLLSVIIFLSVAIITCWL 60

Query: 61  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 120
           VVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS+HMDS+KMIV+  MG 
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120

Query: 121 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 180
           PF STIPTF LMP+NE + N  V VNF+YPFGRPV SDW+ LELRF A++SYI+NRW SK
Sbjct: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180

Query: 181 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRLLEIYCDHLWL+INDSTPNFD TKC+VDL
Sbjct: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A0A0LV68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 0

Query: 3   STIATTQGVTSSS----AAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 62
           +T  TTQG  SSS    A +R   +QHG  AKRT+VIRIIGRSLL  I L+ +AILTCW 
Sbjct: 6   TTTTTTQGEASSSSIIRAPKRGAYRQHG-IAKRTRVIRIIGRSLLCAIMLLGIAILTCWF 65

Query: 63  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 122
           VV P+TP+LMVE+G+VT   ST   LNATI F+I++ NPNKRAS+++DSMKM V   M  
Sbjct: 66  VVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSV 125

Query: 123 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 182
           PF S IP F + P+N T+L P + VN IYPFGRP+ + WI +EL F AK+SYI NRW SK
Sbjct: 126 PFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASK 185

Query: 183 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRL+EIYC+H W KI+DS PNFDN KC+VDL
Sbjct: 186 PRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56
Identity = 123/192 (64.06%), Postives = 148/192 (77.08%), Query Frame = 0

Query: 21  YRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVTPTGST 80
           Y QQHG TAKRTK++RIIGRSLL V+FLV LAI+ CWLVVFPKTP L++E G VTP   T
Sbjct: 25  YGQQHG-TAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLT 84

Query: 81  HNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNETILNPV 140
              LNA+I+F+IK+ NPNKRAS+HMDSMKM ++ +MG+ F +TIPTF   P N+T LNP 
Sbjct: 85  DRKLNASISFTIKSYNPNKRASIHMDSMKMTLD-DMGQTFITTIPTFTQPPGNQTFLNPT 144

Query: 141 VDVNFIYPFGRP---VPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDST 200
           V+VNFIYPFG+    + SD +  EL F A +SYI+ +W SK R LEIYCD + LKIN ST
Sbjct: 145 VEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGST 204

Query: 201 PNFDNTKCKVDL 210
           P FDNTKCKVDL
Sbjct: 205 P-FDNTKCKVDL 213

BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A1S3CGS4 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.7e-56
Identity = 128/209 (61.24%), Postives = 155/209 (74.16%), Query Frame = 0

Query: 1   MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVV 60
           MRST ATT                HG T KRT++IR++GRSLLGVIFLVAL ++ CWLVV
Sbjct: 1   MRSTTATT---------------THGIT-KRTRLIRLVGRSLLGVIFLVALGMIICWLVV 60

Query: 61  FPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPF 120
            PKTPRL+VETGKV    ST ++LNATIAF++K+ NPNKRAS+HMD M+MIV+ NMG  F
Sbjct: 61  IPKTPRLIVETGKVVVHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVD-NMGVRF 120

Query: 121 SSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPR 180
           SS IP+F L P+N+T+L   V VNF YPFG    ++ I  EL+F A++SY + +W SKPR
Sbjct: 121 SSAIPSFTLTPRNQTVLWSAVQVNFEYPFGY---TEEINPELQFSAEVSYSVEKWMSKPR 180

Query: 181 LLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           LLEIYC+HL LKINDST  FDNTKCKVDL
Sbjct: 181 LLEIYCNHLLLKINDST-TFDNTKCKVDL 188

BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07
Identity = 53/191 (27.75%), Postives = 87/191 (45.55%), Query Frame = 0

Query: 30  KRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVTPTGSTH-NVLNATI 89
           +R  +I  I   +L +IF+ A+  L  WL   PK  R  VE   V     T+ N ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 90  AFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQN-----ETILNPVVDV 149
            F+I++ NPN R S++  S+++ V          T+  F     N     ET++   V V
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 150 NFIYPFGRPVPSD----WIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDSTPN 209
           +     G+ + S      I  E+   A++ + +  W S  R  +I C H+ + +  S PN
Sbjct: 141 S--KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSL--SQPN 200

BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 46.6 bits (109), Expect = 2.8e-05
Identity = 50/183 (27.32%), Postives = 77/183 (42.08%), Query Frame = 0

Query: 37  IIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVT--PTGSTHNVLNATIAFSIKT 96
           I+   LLG+  LV LAIL  +L + PK     VE   V     G+  + +NA  ++ IK+
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 97  SNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNET-ILNPVVDVNFIY------ 156
            NP K  S+   SM++    +        I  F   P+NET I   +V  N         
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 157 PFGRPVPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDST-PNFDNTKCK 210
                     I +E+   A++SY    + S+ R L+  C  + + +  S+   F    CK
Sbjct: 161 DLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 220

BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 42.0 bits (97), Expect = 7.0e-04
Identity = 31/123 (25.20%), Postives = 62/123 (50.41%), Query Frame = 0

Query: 23  QQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKV---TPTGS 82
           + HG +  R K+IR I  S++ V+F++ L IL  W ++ P  PR +++   V     +G+
Sbjct: 5   ENHGHS--RRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGN 64

Query: 83  THNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK-PFSSTIPTFILMPQNETILN 142
             N+L +    ++ + NPN +  ++ D + +       +  F ++IP      ++  I +
Sbjct: 65  PPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWS 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038895458.19.6e-8074.65uncharacterized protein At1g08160-like [Benincasa hispida][more]
XP_008462391.13.9e-7369.34PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo][more]
XP_011648453.28.7e-7368.25uncharacterized protein LOC105434468 [Cucumis sativus] >KGN64863.1 hypothetical ... [more]
XP_038896075.19.0e-6275.16uncharacterized protein LOC120084246 [Benincasa hispida][more]
XP_011654120.12.6e-6160.66uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Q8VZ134.0e-0427.32Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P... [more]
Match NameE-valueIdentityDescription
A0A1S3CGU21.9e-7369.34uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 P... [more]
A0A0A0LSU54.2e-7368.25LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 ... [more]
A0A0A0LV681.3e-6160.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1[more]
A0A6J1HJ522.1e-5664.06uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
A0A1S3CGS44.7e-5661.24protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G22870.12.3e-0727.75Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G08160.12.8e-0527.32Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G11660.17.0e-0425.20NDR1/HIN1-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 27..205
NoneNo IPR availablePANTHERPTHR31852:SF1NDR1/HIN1-LIKE PROTEIN 6coord: 27..205

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC01G013340CmUC01G013340gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC01G013340.1-exonCmUC01G013340.1-exon-CmU531Chr01:26509399..26509904exon
CmUC01G013340.1-exonCmUC01G013340.1-exon-CmU531Chr01:26510317..26510440exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC01G013340.1-cdsCmUC01G013340.1-cds-CmU531Chr01:26509399..26509904CDS
CmUC01G013340.1-cdsCmUC01G013340.1-cds-CmU531Chr01:26510317..26510440CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC01G013340.1CmUC01G013340.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane