CmUC01G013340.1 (mRNA) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGGTATAAATATTTGACTTTTTGAGAAAGTGTTTGGAATACTTTTATGAATTGTTTAATTTAAACGATAAATTCTTTTAGAAAAAATACAAATGTTTGGCAACCATTTAAATATATTTCGAAGACCATTAAAGTTTTTGTTTTAAATAGTTTTAAGTTAATTATCCAAACATGCATAAGACAGATATACTAAAAACATACAAACGTTGTTAGGTTTTGTTGACGTCAAAGAATAAATTGGTTGGATTTACCTCAGTTTTAACCAAAGTTACTAACATGATAACCTTTTTATTTTTTTGTTTTTAGATTCTTAATTTCCTTTTGTTGTCTCTTCTTTAATTCTAAGGGTTTTTTGTTTTTCAAAATCTAAGCCAAGATTTGTCTCTCTAAAACTTTATGGCTCTGTTCGTATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL Homology
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_038895458.1 (uncharacterized protein At1g08160-like [Benincasa hispida]) HSP 1 Score: 307.4 bits (786), Expect = 9.6e-80 Identity = 162/217 (74.65%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_008462391.1 (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 3.9e-73 Identity = 147/212 (69.34%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_011648453.2 (uncharacterized protein LOC105434468 [Cucumis sativus] >KGN64863.1 hypothetical protein Csa_022777 [Cucumis sativus]) HSP 1 Score: 284.3 bits (726), Expect = 8.7e-73 Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_038896075.1 (uncharacterized protein LOC120084246 [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 9.0e-62 Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. NCBI nr
Match: XP_011654120.1 (uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical protein Csa_022684 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 2.6e-61 Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.0e-04 Identity = 50/183 (27.32%), Postives = 77/183 (42.08%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A1S3CGU2 (uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73 Identity = 147/212 (69.34%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A0A0LSU5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 4.2e-73 Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A0A0LV68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61 Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56 Identity = 123/192 (64.06%), Postives = 148/192 (77.08%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. ExPASy TrEMBL
Match: A0A1S3CGS4 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 4.7e-56 Identity = 128/209 (61.24%), Postives = 155/209 (74.16%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07 Identity = 53/191 (27.75%), Postives = 87/191 (45.55%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 46.6 bits (109), Expect = 2.8e-05 Identity = 50/183 (27.32%), Postives = 77/183 (42.08%), Query Frame = 0
BLAST of CmUC01G013340.1 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 ) HSP 1 Score: 42.0 bits (97), Expect = 7.0e-04 Identity = 31/123 (25.20%), Postives = 62/123 (50.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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