Clc11G12340.2 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc11G12340.2
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOB domain-containing protein
LocationClcChr11: 21066547 .. 21068311 (-)
Sequence length708
RNA-Seq ExpressionClc11G12340.2
SyntenyClc11G12340.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGATGTAATGTAAGTAATTAGATATAATTTTTTTAAAAGGTGTTTGGAAATCCCGAGACATTGACGAAGAAGGAAAAAGGGAGAAAAGATTGAGAGATCTCTCCCCAAGTTGAAGTCAAAGAATGATGGAGACAAGTCTCTTTAGTCATTCTTATTCTCTTTTGCCTTCTCTCCTTTTTAGGAAAAATCCTTTTTTTTTTTTTATCCCTTCCTTCAACCTTTTATTATTAATTTTTATTTCTATTTTCCCCTCTCTCTTAAAACCCTCCTCTTCATTTCATACATTTTACTGGAAAATGAACTGTACTTAATATTTTCAACCAGATCTTCTTCCTGTCTTCCATGTTTTTCTTATTATACTATTCATCGATCACAGTGAACCAAAATACTTTTTTTTTTTCCTTCTCTCTCTCTAAACCCATCTTCGTTTTTGCTTCTCTTTTCTTCTTCACGAGATCCAACTTCCCAAACCCACTTGTAAAAGGGTAAGATTTTCCCCTCTTTTTCCTCTTTGGTTTCTGCATTTTCTTCTCTCTCTCTCCTCAGTCTATTCTAAGGTACAATTTTTTTTTTTTTTTTTTTTTAATCTTTTCCTTGTTTGTTTTCAAACCCATCTTTGGATTCAAGCAAATCTTCTACACCTACTGTGTTTCAATGGAAAAAAACTACGAGTGGAGATTATTTTGTTCTCTTCGGATTCTCTGTATATAAGGAAAGAATTTCCCTAGATAATCCCTTTTCACCCAATTCCAATTCAGAAATAACTTTGCTCTTAAATCTTGTGTTTCCCATATACCATCATTTGTATGAAAGTCTTTTCTCTTCAAAATCTTTCCTACAGACAGAGTCATATAGAAATTTTCTTTCCATTGAAACAGACAAACAAACAAAAAATCAAATAGGTCAAGTGCATAACATGGCAGTTCTCTAATACATATAGTTTTTTTTTCCTCCCTTTTCTAAACGATTTTGTAAAGTTCATAACATGATAGTTGTCTAATTCATAGTGGTTTTCCCCCTTTGTAAAGGGATTTTTAGTATATATGTTTGATTGGTTATGTTGAAGTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCATCGACTTCCTCGAATTCGCCCTGTGCAGCTTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCTTATTTTCCGCCGGATCAGCCACAGAAATTCGCCAATGTTCATAAGGTATTCGGAGCCAGCAATGTCACAAAACTTCTCAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCCGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCCCTGATTTCGCCGCCCTCCACTGTTTCCACCGTCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGCCTCTATCACGATCAATCTTTTCCTCGAGATCAACAACAGCAACAGATGATGCTCCGACGAAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCTGTCAATGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

mRNA sequence

ATGCATGGATGTAATTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCATCGACTTCCTCGAATTCGCCCTGTGCAGCTTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCTTATTTTCCGCCGGATCAGCCACAGAAATTCGCCAATGTTCATAAGGTATTCGGAGCCAGCAATGTCACAAAACTTCTCAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCCGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCCCTGATTTCGCCGCCCTCCACTGTTTCCACCGTCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGCCTCTATCACGATCAATCTTTTCCTCGAGATCAACAACAGCAACAGATGATGCTCCGACGAAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCTGTCAATGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Coding sequence (CDS)

ATGCATGGATGTAATTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCATCGACTTCCTCGAATTCGCCCTGTGCAGCTTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCTTATTTTCCGCCGGATCAGCCACAGAAATTCGCCAATGTTCATAAGGTATTCGGAGCCAGCAATGTCACAAAACTTCTCAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCCGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCCCTGATTTCGCCGCCCTCCACTGTTTCCACCGTCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGCCTCTATCACGATCAATCTTTTCCTCGAGATCAACAACAGCAACAGATGATGCTCCGACGAAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCTGTCAATGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Protein sequence

MHGCNSNRVFLQRRNWKMASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS
Homology
BLAST of Clc11G12340.2 vs. NCBI nr
Match: XP_038889589.1 (protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 7.6e-126
Identity = 224/230 (97.39%), Postives = 226/230 (98.26%), Query Frame = 0

Query: 6   SNRVFLQRRNWKMASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGAS 65
           SNRVFLQRRNWKMAS+SSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGAS
Sbjct: 4   SNRVFLQRRNWKMASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGAS 63

Query: 66  NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE 125
           NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE
Sbjct: 64  NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE 123

Query: 126 LSKYQNLGIGNHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQ 185
           LSKYQNLGIGNHAALISPPS VSTVAHGQRNHQPAFNFARDQPHSLYHDQ FPRDQQQQQ
Sbjct: 124 LSKYQNLGIGNHAALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQ 183

Query: 186 MMLRRSFDGGSNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           MMLRRSFDGGSNYDGLL+VNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 184 MMLRRSFDGGSNYDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 233

BLAST of Clc11G12340.2 vs. NCBI nr
Match: XP_038889590.1 (protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 212/218 (97.25%), Postives = 214/218 (98.17%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSN 197
           AALISPPS VSTVAHGQRNHQPAFNFARDQPHSLYHDQ FPRDQQQQQMMLRRSFDGGSN
Sbjct: 121 AALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSFDGGSN 180

Query: 198 YDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           YDGLL+VNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 YDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 218

BLAST of Clc11G12340.2 vs. NCBI nr
Match: XP_004152887.1 (protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_006748 [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 5.9e-118
Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSN 197
           A LISPPST+STV HGQRNHQPAFNFARDQPHSLYHDQ FPRDQQQ QMMLRR+FDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 198 YDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           YDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

BLAST of Clc11G12340.2 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 210/220 (95.45%), Postives = 213/220 (96.82%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRD--QQQQQMMLRRSFDGG 197
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQ FPRD  QQQQQMMLRR+FDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           SNYDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

BLAST of Clc11G12340.2 vs. NCBI nr
Match: KAA0047653.1 (LOB domain-containing protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116
Identity = 210/221 (95.02%), Postives = 213/221 (96.38%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRD---QQQQQMMLRRSFDG 197
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQ FPRD   QQQQQMMLRR+FDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 198 GSNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           GSNYDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

BLAST of Clc11G12340.2 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 146/220 (66.36%), Postives = 163/220 (74.09%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 138 NHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGG 197
            H +L      ++ +A        A    RD  H   H Q FPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           +NYDG +      +IG ++ QFQQPRAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

BLAST of Clc11G12340.2 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.3e-50
Identity = 109/183 (59.56%), Postives = 124/183 (67.76%), Query Frame = 0

Query: 19  ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 78
           A   + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 79  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 138
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

Query: 139 ALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLY------HDQSFPRDQQQQQMMLRRSF 196
              + P  ++    G      A NF  +  HS            F ++Q     ML RS+
Sbjct: 146 TAPTGPQAMAEFI-GNAMPNGAHNFI-NIGHSAALGSLGGSASVFGQEQFGNAQMLSRSY 205

BLAST of Clc11G12340.2 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 104/185 (56.22%), Postives = 123/185 (66.49%), Query Frame = 0

Query: 23  SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 82
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 83  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALIS 142
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +   +
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 143 PPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPR--------DQQQQ----QMMLRR 196
            P  ++        +  A NF      +L H  +            QQ+Q      ML R
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNFI-----NLGHSAALGSLGGSTAMFGQQEQFGSNAQMLSR 209

BLAST of Clc11G12340.2 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 93/124 (75.00%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 19  ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 78
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 79  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 138
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 139 ALIS 143
           A  S
Sbjct: 151 ASAS 154

BLAST of Clc11G12340.2 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 93/124 (75.00%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 19  ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 78
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 79  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 138
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 139 ALIS 143
           A  S
Sbjct: 151 ASAS 154

BLAST of Clc11G12340.2 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.8e-118
Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSN 197
           A LISPPST+STV HGQRNHQPAFNFARDQPHSLYHDQ FPRDQQQ QMMLRR+FDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 198 YDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           YDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

BLAST of Clc11G12340.2 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.0e-117
Identity = 210/220 (95.45%), Postives = 213/220 (96.82%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRD--QQQQQMMLRRSFDGG 197
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQ FPRD  QQQQQMMLRR+FDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           SNYDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

BLAST of Clc11G12340.2 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.1e-117
Identity = 210/221 (95.02%), Postives = 213/221 (96.38%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRD---QQQQQMMLRRSFDG 197
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQ FPRD   QQQQQMMLRR+FDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 198 GSNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           GSNYDGLLAVNVTASIGNLSHQFQQ RAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

BLAST of Clc11G12340.2 vs. ExPASy TrEMBL
Match: A0A6J1D6T8 (LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.2e-114
Identity = 209/231 (90.48%), Postives = 213/231 (92.21%), Query Frame = 0

Query: 6   SNRVFLQRRNWKMASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGAS 65
           SNRVFLQRR  KMAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGAS
Sbjct: 5   SNRVFLQRRKLKMASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGAS 64

Query: 66  NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE 125
           NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE
Sbjct: 65  NVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSE 124

Query: 126 LSKYQNLGIGNHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQ 185
           LSKYQNLGIGNHAALISPPS     AHG R++QPAFNF RDQPHSLYHDQ FPRD QQQQ
Sbjct: 125 LSKYQNLGIGNHAALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRD-QQQQ 184

Query: 186 MMLRRSFDGGSNYD-GLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           MM+R  FDGGSNYD GLLAVNVT SI NL HQFQQPRAAAG DRRGTLDHS
Sbjct: 185 MMIRSGFDGGSNYDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 234

BLAST of Clc11G12340.2 vs. ExPASy TrEMBL
Match: A0A6J1D9K0 (LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.1e-109
Identity = 199/219 (90.87%), Postives = 203/219 (92.69%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 138 AALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSN 197
           AALISPPS     AHG R++QPAFNF RDQPHSLYHDQ FPRD QQQQMM+R  FDGGSN
Sbjct: 121 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRD-QQQQMMIRSGFDGGSN 180

Query: 198 YD-GLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           YD GLLAVNVT SI NL HQFQQPRAAAG DRRGTLDHS
Sbjct: 181 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 218

BLAST of Clc11G12340.2 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 146/220 (66.36%), Postives = 163/220 (74.09%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 138 NHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGG 197
            H +L      ++ +A        A    RD  H   H Q FPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           +NYDG +      +IG ++ QFQQPRAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

BLAST of Clc11G12340.2 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 146/220 (66.36%), Postives = 163/220 (74.09%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 138 NHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGG 197
            H +L      ++ +A        A    RD  H   H Q FPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           +NYDG +      +IG ++ QFQQPRAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

BLAST of Clc11G12340.2 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 146/220 (66.36%), Postives = 163/220 (74.09%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 138 NHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGG 197
            H +L      ++ +A        A    RD  H   H Q FPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           +NYDG +      +IG ++ QFQQPRAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

BLAST of Clc11G12340.2 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 146/220 (66.36%), Postives = 163/220 (74.09%), Query Frame = 0

Query: 18  MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 77
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 78  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 137
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 138 NHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGG 197
            H +L      ++ +A        A    RD  H   H Q FPR    +QM        G
Sbjct: 121 THQSL-----GINLLAGAADGTATA---VRDHYH---HHQFFPR----EQMFGGLDVPAG 180

Query: 198 SNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS 236
           +NYDG +      +IG ++ QFQQPRAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

BLAST of Clc11G12340.2 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 85/121 (70.25%), Postives = 99/121 (81.82%), Query Frame = 0

Query: 19  ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 78
           +S S NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL PHQ
Sbjct: 4   SSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQ 63

Query: 79  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 138
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L  A ++L+ Y   G+   A
Sbjct: 64  REDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY---GLSTSA 121

Query: 139 A 140
           A
Sbjct: 124 A 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889589.17.6e-12697.39protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida][more]
XP_038889590.12.6e-11897.25protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida][more]
XP_004152887.15.9e-11896.33protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC... [more]
XP_008441920.11.4e-11695.45PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDIC... [more]
KAA0047653.11.9e-11695.02LOB domain-containing protein 6 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
O044792.2e-6766.36Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Q32SG39.3e-5059.56LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1[more]
A1YKY71.7e-4856.22Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1[more]
A2WXT01.7e-4875.00LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P... [more]
Q8LQH41.7e-4875.00LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6... [more]
Match NameE-valueIdentityDescription
A0A0A0LML72.8e-11896.33LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV... [more]
A0A1S3B5A07.0e-11795.45LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=... [more]
A0A5A7TVS19.1e-11795.02LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1D6T83.2e-11490.48LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1D9K09.1e-10990.87LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT1G65620.11.6e-6866.36Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.21.6e-6866.36Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.31.6e-6866.36Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.41.6e-6866.36Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.22.4e-4570.25Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 26..123
e-value: 4.9E-43
score: 145.7
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 25..126
score: 27.115797
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..235
NoneNo IPR availablePANTHERPTHR31301:SF76LOB DOMAIN-CONTAINING PROTEIN 6-LIKEcoord: 19..200
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 19..200

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc11G12340Clc11G12340gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc11G12340.2-exonClc11G12340.2-exon-ClcChr11:21066547..21067239exon
Clc11G12340.2-exonClc11G12340.2-exon-ClcChr11:21068297..21068311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc11G12340.2-cdsClc11G12340.2-cds-ClcChr11:21066547..21067239CDS
Clc11G12340.2-cdsClc11G12340.2-cds-ClcChr11:21068297..21068311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc11G12340.2Clc11G12340.2-proteinpolypeptide