Clc11G05650.2 (mRNA) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAATTAAAAGAAGAGGGTCATTTTTAAGCATAACCCAGAAAAACGCACGCCCTGTCTTTGGAGGAACGAAGAGAAAGATTCAGCCGTGGGTTTCAGTGGGTGGCTGGAATCAATCGTGGGTCTCCTTCAAGAGCCTCAAAACGGTTTGGGTTTCGTTTTTCCGGTAGCCTCAGGCGGCCGTTGAAGCTGTGTTTCACGTTGGTTTAGCTTGTGAGGTATTTTTGTTGTTCTTGACGCGATTCAGTCCAAAGATTTTGGGTGTGGTGGGTTTATTCCATCGTATTCTGTGTTGGTGAATTGATGCTCTTAATAAAACTCTCAAAGTGGATGTAGACCGAAATGTTGAAACTGTGTCTATTTTGATATCTTTATGTCTTGCTCTGTTTAATTTGTTGCTGCAAATTTGCATTCTATTGGGCGTTTCTAGGGTTCAGTCTTTTACTGTTACGAAATGGCTGTTGATTGTGTTGGATTTGGTGTCATTGTGCCATGATATGGATAGCACCAGTTCTTTAATTTTAGTTGGTTGTTAGGCAGTTAAAGTAATGGAGTGTGTCTTAAGAATTTCTTTTTATCTACGTAGGTGAGTTTGCCCTAAAAAATGGGCAGTAAAGGTCGTATTCCGCCTCCACATGCAAGGCGTACTCTTCCAGGTTCTGGTGTAATACATCCAGAAGCATTTGGTCATGGGCTACGTCCTCCACCAGGTGCCTTTCCTCCCTTCGACATGTTGCCTCCTCCAGAAGTGATGGAACAGAAGCTAGCTGGGCAACATATTGAGATACAGAAACTCGCCACCGAGAATCAGAGGCTTGCTGCTACCCATGGAACCTTGAGGCAAGAGCTTGCTGCTGCTCAGCATGAGCTGCAAATTCTTCATGCTCAAATAGGAGCTGTGAAATCTGAAAGAGAACAACAAGCAAGGAATCTTTCTGATAAGATTGCAAAGATGGAAGCAGAATTACAAGCAGCTGAGCCAATTAAGTTAGAGTTGCAGCAAGCAAAATCAGATGCTCAAAACTTGATTGTAGCAAGGCAGGAGCTTATTACTAGAGTGCAACATTTGACCCAAGACCTCCAGAGGGCCCATGGAGATGTGCAGCAGGTTCCTGTTTTGATGTCAGAACTTGAGAGTTTGAGGCAGGAATATCAGCATTGTAGGTGTGTAATTTGTATAGCATTTAACTTTAGAGGGACTTTTTAGGATGTCACCTAACTAGTTAAGTTAGTTTTAGGATGCCTTGTGAATTCAATCAAATTCAGTCTTTATCTTCAACAGTTCAGTTTATTTGGATTTCTAATTAGGCCTCTGGCTTGTGGTTATAGATGCCATGCTGCCCTAGCTTGACTTGTTTCCTTAGCTATTTATAAGAGGCTTATTTATTGTGTTTTTAAATATTAAGCCAAGGTGTCTAGTGAGTATTGTTCAGAAGTTACTGTAGACTATGAAACACATTTCCTTATACCCCCACGAGAAAAAAGAAAAAAAAACCCACTATAAACCCATTTTCCCTTCATTTCTTAAAGTTCACTGTGTGGTCTATCCTTTACTGGACTAGAGTTTGATCCAAATGTACTTCAGGGTTTTTTTTAATCTTTTTTTTTTTTTAAAAAAAAAAATTTATTGGGTTATGTTCCTTGCTTGTAAAATGCCATGACCTAGTTATTGACCTTGCAGGGCGACCTATGACTATGAGAAAAAATTATACAATGATCATCTTGAGTCACTTCAGGTGATGGAAAAGAATTATATCACTATGGCTAGGGAACTGGAGAAGCTTAGGGCAGAGTTGACAAATACTGCTAGTTTAGAACGAAGACATGGTACTCTTGCTTACCCCTATTTCACTTTTGTTTTTTTGGGATTATCTTATCCTTCTTGAATTTCCCTTAATCTTCCACTGATATTGTGATGACTGCACGTAGGTGGGCCTTATGGTACTACCCAAAACAACGAGATAGAGGCTTCTGGGAATTCAACTGGACAAAATACTTATGAAGATGGTTATGGTGTTGCCCAGGTTTGTCACATATTCCACTTAATGGTTTTCATTAGTTGATATTTTGTTTTTGAATTTATAGTTCTTTCTCTTTCTGTATGTTTCTTACTATTGATGCAAATGGAGAAACACCTTTTGACGGGCTGTGAGGTCTTTTTGCTGCCTATGTTATACCTAGGCTTTTCTTTGCATCATGATCCGAGGTCTCCTTGGTGTTGGGTTTCAATTGTTGAGTAGAGAAGGTTTAGAAATGTTTATCTTCCTGATAGGAAGCTTTCTTCTCTAGGAGTAGGAGACTTGTTTCAATCCAAACTACACTGTTTAGGGAAAATGAAAGAATGAAAATAAAAAATGAAAAGGCCTATAAAAGACAGCTAAGCAAAAAGACCCACAAAGCTAACCAGACAAAAAGGGTCTCCCACCAATGGTGTTATAAAAGATTTTTTCAATTGGTCAAAAGAATAAAGCAATTATAAGAGCTATAAAAAGATGTACGTTTGCACTAAGACATAGCACGGAAGATAATTTGTTCTAAAAAAAACTCTCAAAGTGCTTCCTTTACCATTGAAAAGGCAAGTGTTCCATTCCTCCCCAGTAGTCCATAAGAAAACCTCCATGACACTATGTTTCTATAAAGGAGACTTACTCACCTTGTATATCGAATTTACTCTCTTTATTATGATTCTGTCCTTGGTTTGTAGAAAATTGTCGGGGATTTGTTTTTGTGGAGACAGCATATAAGTCATTATGGAACTGACTCGCCTTGTTACTTGTAGGCTTTATGGATTTTCTTAATCCAAAAGGTCATGAGTTCAAGGAGCTGTTGGTGAGAGAGAGAGTACATCAGTCAAGACTCATGAGGGGGTGGTTTTCAATTATCATCTGAGTCAAGACTCATGAGGGGGTGGTTTTCAATTATCATCTGGTTGGAAATTTATGAAAATGGCTAAAGTGAGAATTTGTTTCCAAAATTTCTGAAAATGGTGGGTTGGGGTATTTGAAACTTACAATGCAATTATTCTGTCCTCTTGGCTAAGTAGAGTCGTTGTGCAGGTTTCCTTTAGAACCTAAGGCGCTGTAGCATAGGATTTTGGTACATCGACCATGTTAACGAGTGAGACAGTACAATAATGACCAAAGGGCAACTTGTGAAAGGCAATTTGGAAGTGTCCTCGCAAGTTTCTAGGCTTCACCAAGTTCTTAAACGGTGGTAGTGCAATGTTCCACTTTTGGACAATTTTTGGATTGGCGATGCTCCTCTATGTTCTTCATTCCCTTATCTATATGATTTGTTTTTTTTTTTGTTTTTTTTTGGAAAAAAAAAAAACAAACAGAAACAGAAAAACAAAACAAAAAATAAATAAATAAAAGAAAAGGGGTCCCATGGCACTTGTTTTCTCCTTGTGTGGACACGAGTTTTCTTTTACTTTCACCTTAGGGTAGAGCATTATTGGATGGGAAAGGTGTGCATATGTCTATGATGTTGCCCCTTTTACACGGTTTTTGTTTTAGGTACAAGTTACAGCGAAAGTTGGACATAAACCCTTGATTGCTCTGTTCTATTCCCATGTAAATCCTTCTTAACTCGCTTGCTTCATTCCTCTTCCGTCTTGCAAAAAGCCAGATTTTTCTTCTGGCTAGTTGCTCATGGAAGGGTTAACACCTTGGACTGCGTCTAAGACTCTTCTATGGTTTTGGGTCCTATGCTTTGTTTGAACATAAGGTATGATTTGGATCAGACGAAACTTTATGGTGAAGATTTAGGTTAGCTTTTGGTACTTCTTTGGTGTTAGCTTGGCATTAAACAGGACTGTTCATCCAGAACGTTATTTTATAATTCTTCTTTAGTTTTGATACTCAACCATTGTAGTATCCTTGGTAATTTTGTCTCTATTTCATTTGGGCTTTTGTGTTTCTGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAATGAAGGTAACTTTTAATTTATATATATGAGTATATTAGTTTGACATTTCAATAGTTCATGGATTCATACTATGAAAGACAATGGAGAGACATGGGGATTTCATGTTTGTGTCTAGTTGGTACTTTAAAATAGTCTAATAGATCTCTAAACTTTCAATTGTGTCCAATGGATCATTGAACTTCAAAATGCCTAATAGGTTCTTAAACTTTCCATTTTGAGTCCAATAAGTTCTTTAACTTTTAACTGTGTGCCTAATCGTCCTTGGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCCATTGGCCTATAGAATACAAAATTGAAATTTTGAGTCCTATTAGACATAAAATTCAATTTTGTATTTAACAAATTACTAATTTTGGAAATTTTCGAATATGATAGTGAGGTATTAGACACAAAACTCAAAGTTTCTTTTTTTAATTATTGTTTTATAAGAAGTAATTTTATTGATGGTATGAAATTATAAAATTGGGGACCTCAATAGGGAGGCAAAAGGCCTCTTCAGTTTGAAATGAGGAAATTAAAGCTATATTAACGAAAAAGAGATGAGCATTTACACCAAGCCACCACCATATTAATTATAGCATAAAAATATCTATTATATGTGCGTTCCTTATTTTGAAAGATTAGTTGATTGCTTTCTCCAGCAGTTGGCTCTAACAAAGGTTTCCCAAAGAAGCTTCTTTTCATTGAAAGCTTATGGATTATTGAAAGTTTGGGACTTACTTGACACTTTTTAAAATTTAGAGAAAGTTCAGAGGCTAAACATACAATTTAATATTTGTTTTTTCCCATCTAAATAAGGACTTGAACTGCAATATTCAACTGCACTGGTTTATCTCCATCTTCCTTTGTTATCTAGTTTGGACATAACTAGTAGTTTACACTTCAATATAAGGTATGTTGATTAGGTTTTATTTTTCCTAACGATTGGTTACTTGTTGAAATTGTGCGATAGGGACGTGGCCCGCTGCCTGCTACTGCAGGTGCTGCATCCAGTGCTGGTGCAACCGCATACACAGGACCTCAAACTGGTTCTACTGCAACCCGACCCAACTTCGATGCCGCAAGGGGTCCGCAACGAGGACCCGGTTATGATGGAGGAAGAGGATCCATTTATGATTCACAAAGACCTGGTTATGAAGGACAAAGAGGACCAGGTTACAATGTGCCTGGGTTACCTACTTACGATGCACCTAGAGGAGCTGGCTATGATGCTCAATCTAGAGGTGTTGCCGGACATGCTGCACCTGGAAACACGGCTCCTTATCGGTCTTCAACACCGCCTGGTCGTGGTGGTGGGTACGAAGCACCATCTCGAGGAGGAAACCCTGGTAGGAGATGAGCTAAAGGTACTACTTGAGAATACCATCTATTACTCCACAGTTGTCATCTGTTGTGCCATTCCCTCAAATTTGCAAACACTTTTTTTTTTTTTTGGCTAGAAGTTTATTATCAAATGCACTTACTTGACAAACTTTGAATGAATCATTGGAGAAATTTACATTGACATCAAGGTCAAAATCATTTCTAGTTTAGTGATTCAATCATTTTCAGCTGTCTGATCAAGGAAACTTCACATGATAATGAACTTAGAAAATCCAATGTTC CTAAAATTAAAAGAAGAGGGTCATTTTTAAGCATAACCCAGAAAAACGCACGCCCTGTCTTTGGAGGAACGAAGAGAAAGATTCAGCCGTGGGTTTCAGTGGGTGGCTGGAATCAATCGTGGGTCTCCTTCAAGAGCCTCAAAACGGTTTGGGTTTCGTTTTTCCGGTAGCCTCAGGCGGCCGTTGAAGCTGTGTTTCACGTTGGTTTAGCTTGTGAGGTGAGTTTGCCCTAAAAAATGGGCAGTAAAGGTCGTATTCCGCCTCCACATGCAAGGCGTACTCTTCCAGGTTCTGGTGTAATACATCCAGAAGCATTTGGTCATGGGCTACGTCCTCCACCAGGTGCCTTTCCTCCCTTCGACATGTTGCCTCCTCCAGAAGTGATGGAACAGAAGCTAGCTGGGCAACATATTGAGATACAGAAACTCGCCACCGAGAATCAGAGGCTTGCTGCTACCCATGGAACCTTGAGGCAAGAGCTTGCTGCTGCTCAGCATGAGCTGCAAATTCTTCATGCTCAAATAGGAGCTGTGAAATCTGAAAGAGAACAACAAGCAAGGAATCTTTCTGATAAGATTGCAAAGATGGAAGCAGAATTACAAGCAGCTGAGCCAATTAAGTTAGAGTTGCAGCAAGCAAAATCAGATGCTCAAAACTTGATTGTAGCAAGGCAGGAGCTTATTACTAGAGTGCAACATTTGACCCAAGACCTCCAGAGGGCCCATGGAGATGTGCAGCAGGTTCCTGTTTTGATGTCAGAACTTGAGAGTTTGAGGCAGGAATATCAGCATTGTAGGGCGACCTATGACTATGAGAAAAAATTATACAATGATCATCTTGAGTCACTTCAGGTGATGGAAAAGAATTATATCACTATGGCTAGGGAACTGGAGAAGCTTAGGGCAGAGTTGACAAATACTGCTAGTTTAGAACGAAGACATGGTGGGCCTTATGGTACTACCCAAAACAACGAGATAGAGGCTTCTGGGAATTCAACTGGACAAAATACTTATGAAGATGGTTATGGTGTTGCCCAGAGAAGGTTTAGAAATGTTTATCTTCCTGATAGGAAGCTTTCTTCTCTAGGAGTAGGAGACTTGTTTCAATCCAAACTACACTGCTTTATGGATTTTCTTAATCCAAAAGGTCATGAGTTCAAGGAGCTGTTGGGACGTGGCCCGCTGCCTGCTACTGCAGGTGCTGCATCCAGTGCTGGTGCAACCGCATACACAGGACCTCAAACTGGTTCTACTGCAACCCGACCCAACTTCGATGCCGCAAGGGGTCCGCAACGAGGACCCGGTTATGATGGAGGAAGAGGATCCATTTATGATTCACAAAGACCTGGTTATGAAGGACAAAGAGGACCAGGTTACAATGTGCCTGGGTTACCTACTTACGATGCACCTAGAGGAGCTGGCTATGATGCTCAATCTAGAGGTGTTGCCGGACATGCTGCACCTGGAAACACGGCTCCTTATCGGTCTTCAACACCGCCTGGTCGTGGTGGTGGGTACGAAGCACCATCTCGAGGAGGAAACCCTGGTAGGAGATGAGCTAAAGGTACTACTTGAGAATACCATCTATTACTCCACAGTTGTCATCTGTTGTGCCATTCCCTCAAATTTGCAAACACTTTTTTTTTTTTTTGGCTAGAAGTTTATTATCAAATGCACTTACTTGACAAACTTTGAATGAATCATTGGAGAAATTTACATTGACATCAAGGTCAAAATCATTTCTAGTTTAGTGATTCAATCATTTTCAGCTGTCTGATCAAGGAAACTTCACATGATAATGAACTTAGAAAATCCAATGTTC ATGGGCAGTAAAGGTCGTATTCCGCCTCCACATGCAAGGCGTACTCTTCCAGGTTCTGGTGTAATACATCCAGAAGCATTTGGTCATGGGCTACGTCCTCCACCAGGTGCCTTTCCTCCCTTCGACATGTTGCCTCCTCCAGAAGTGATGGAACAGAAGCTAGCTGGGCAACATATTGAGATACAGAAACTCGCCACCGAGAATCAGAGGCTTGCTGCTACCCATGGAACCTTGAGGCAAGAGCTTGCTGCTGCTCAGCATGAGCTGCAAATTCTTCATGCTCAAATAGGAGCTGTGAAATCTGAAAGAGAACAACAAGCAAGGAATCTTTCTGATAAGATTGCAAAGATGGAAGCAGAATTACAAGCAGCTGAGCCAATTAAGTTAGAGTTGCAGCAAGCAAAATCAGATGCTCAAAACTTGATTGTAGCAAGGCAGGAGCTTATTACTAGAGTGCAACATTTGACCCAAGACCTCCAGAGGGCCCATGGAGATGTGCAGCAGGTTCCTGTTTTGATGTCAGAACTTGAGAGTTTGAGGCAGGAATATCAGCATTGTAGGGCGACCTATGACTATGAGAAAAAATTATACAATGATCATCTTGAGTCACTTCAGGTGATGGAAAAGAATTATATCACTATGGCTAGGGAACTGGAGAAGCTTAGGGCAGAGTTGACAAATACTGCTAGTTTAGAACGAAGACATGGTGGGCCTTATGGTACTACCCAAAACAACGAGATAGAGGCTTCTGGGAATTCAACTGGACAAAATACTTATGAAGATGGTTATGGTGTTGCCCAGAGAAGGTTTAGAAATGTTTATCTTCCTGATAGGAAGCTTTCTTCTCTAGGAGTAGGAGACTTGTTTCAATCCAAACTACACTGCTTTATGGATTTTCTTAATCCAAAAGGTCATGAGTTCAAGGAGCTGTTGGGACGTGGCCCGCTGCCTGCTACTGCAGGTGCTGCATCCAGTGCTGGTGCAACCGCATACACAGGACCTCAAACTGGTTCTACTGCAACCCGACCCAACTTCGATGCCGCAAGGGGTCCGCAACGAGGACCCGGTTATGATGGAGGAAGAGGATCCATTTATGATTCACAAAGACCTGGTTATGAAGGACAAAGAGGACCAGGTTACAATGTGCCTGGGTTACCTACTTACGATGCACCTAGAGGAGCTGGCTATGATGCTCAATCTAGAGGTGTTGCCGGACATGCTGCACCTGGAAACACGGCTCCTTATCGGTCTTCAACACCGCCTGGTCGTGGTGGTGGGTACGAAGCACCATCTCGAGGAGGAAACCCTGGTAGGAGATGA MGSKGRIPPPHARRTLPGSGVIHPEAFGHGLRPPPGAFPPFDMLPPPEVMEQKLAGQHIEIQKLATENQRLAATHGTLRQELAAAQHELQILHAQIGAVKSEREQQARNLSDKIAKMEAELQAAEPIKLELQQAKSDAQNLIVARQELITRVQHLTQDLQRAHGDVQQVPVLMSELESLRQEYQHCRATYDYEKKLYNDHLESLQVMEKNYITMARELEKLRAELTNTASLERRHGGPYGTTQNNEIEASGNSTGQNTYEDGYGVAQRRFRNVYLPDRKLSSLGVGDLFQSKLHCFMDFLNPKGHEFKELLGRGPLPATAGAASSAGATAYTGPQTGSTATRPNFDAARGPQRGPGYDGGRGSIYDSQRPGYEGQRGPGYNVPGLPTYDAPRGAGYDAQSRGVAGHAAPGNTAPYRSSTPPGRGGGYEAPSRGGNPGRR Homology
BLAST of Clc11G05650.2 vs. NCBI nr
Match: XP_038890877.1 (protein FLX-like 2 [Benincasa hispida]) HSP 1 Score: 704.9 bits (1818), Expect = 4.3e-199 Identity = 376/440 (85.45%), Postives = 383/440 (87.05%), Query Frame = 0
BLAST of Clc11G05650.2 vs. NCBI nr
Match: XP_008459432.1 (PREDICTED: protein FLX-like 2 [Cucumis melo] >KAA0039397.1 protein FLX-like 2 [Cucumis melo var. makuwa] >TYK00585.1 protein FLX-like 2 [Cucumis melo var. makuwa]) HSP 1 Score: 688.3 bits (1775), Expect = 4.2e-194 Identity = 368/441 (83.45%), Postives = 380/441 (86.17%), Query Frame = 0
BLAST of Clc11G05650.2 vs. NCBI nr
Match: XP_004141487.1 (protein FLX-like 2 [Cucumis sativus] >KAE8648957.1 hypothetical protein Csa_009039 [Cucumis sativus]) HSP 1 Score: 686.4 bits (1770), Expect = 1.6e-193 Identity = 371/442 (83.94%), Postives = 380/442 (85.97%), Query Frame = 0
BLAST of Clc11G05650.2 vs. NCBI nr
Match: XP_022134143.1 (protein FLX-like 2 [Momordica charantia] >XP_022134145.1 protein FLX-like 2 [Momordica charantia]) HSP 1 Score: 681.8 bits (1758), Expect = 3.9e-192 Identity = 359/439 (81.78%), Postives = 374/439 (85.19%), Query Frame = 0
BLAST of Clc11G05650.2 vs. NCBI nr
Match: XP_022993199.1 (protein FLX-like 2 [Cucurbita maxima] >XP_022993200.1 protein FLX-like 2 [Cucurbita maxima]) HSP 1 Score: 676.8 bits (1745), Expect = 1.3e-190 Identity = 366/440 (83.18%), Postives = 374/440 (85.00%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy Swiss-Prot
Match: Q84TD8 (Protein FLX-like 2 OS=Arabidopsis thaliana OX=3702 GN=FLXL2 PE=1 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 2.2e-89 Identity = 175/272 (64.34%), Postives = 217/272 (79.78%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy Swiss-Prot
Match: Q93V84 (Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.1e-35 Identity = 110/307 (35.83%), Postives = 163/307 (53.09%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy Swiss-Prot
Match: Q9C717 (Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.6e-26 Identity = 81/225 (36.00%), Postives = 125/225 (55.56%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy Swiss-Prot
Match: Q9FH51 (Protein FLX-like 4 OS=Arabidopsis thaliana OX=3702 GN=FLXL4 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.5e-18 Identity = 59/179 (32.96%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy Swiss-Prot
Match: F4IMQ0 (Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.1e-15 Identity = 74/225 (32.89%), Postives = 113/225 (50.22%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy TrEMBL
Match: A0A5A7TD26 (Protein FLX-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002010 PE=3 SV=1) HSP 1 Score: 688.3 bits (1775), Expect = 2.0e-194 Identity = 368/441 (83.45%), Postives = 380/441 (86.17%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy TrEMBL
Match: A0A1S3CA57 (protein FLX-like 2 OS=Cucumis melo OX=3656 GN=LOC103498572 PE=3 SV=1) HSP 1 Score: 688.3 bits (1775), Expect = 2.0e-194 Identity = 368/441 (83.45%), Postives = 380/441 (86.17%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy TrEMBL
Match: A0A0A0KXN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643350 PE=3 SV=1) HSP 1 Score: 686.4 bits (1770), Expect = 7.7e-194 Identity = 371/442 (83.94%), Postives = 380/442 (85.97%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy TrEMBL
Match: A0A6J1BXA0 (protein FLX-like 2 OS=Momordica charantia OX=3673 GN=LOC111006485 PE=3 SV=1) HSP 1 Score: 681.8 bits (1758), Expect = 1.9e-192 Identity = 359/439 (81.78%), Postives = 374/439 (85.19%), Query Frame = 0
BLAST of Clc11G05650.2 vs. ExPASy TrEMBL
Match: A0A6J1JXW9 (protein FLX-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111489292 PE=3 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 6.1e-191 Identity = 366/440 (83.18%), Postives = 374/440 (85.00%), Query Frame = 0
BLAST of Clc11G05650.2 vs. TAIR 10
Match: AT1G67170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). ) HSP 1 Score: 330.9 bits (847), Expect = 1.6e-90 Identity = 175/272 (64.34%), Postives = 217/272 (79.78%), Query Frame = 0
BLAST of Clc11G05650.2 vs. TAIR 10
Match: AT3G14750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). ) HSP 1 Score: 149.8 bits (377), Expect = 5.0e-36 Identity = 110/307 (35.83%), Postives = 163/307 (53.09%), Query Frame = 0
BLAST of Clc11G05650.2 vs. TAIR 10
Match: AT1G55170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-27 Identity = 81/225 (36.00%), Postives = 125/225 (55.56%), Query Frame = 0
BLAST of Clc11G05650.2 vs. TAIR 10
Match: AT5G61920.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-19 Identity = 59/179 (32.96%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Clc11G05650.2 vs. TAIR 10
Match: AT5G61920.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-19 Identity = 59/179 (32.96%), Postives = 108/179 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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