Clc09G21040.1 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc09G21040.1
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOB domain-containing protein
LocationClcChr09: 34550085 .. 34554253 (-)
Sequence length543
RNA-Seq ExpressionClc09G21040.1
SyntenyClc09G21040.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTCGATACGATTGCTAAGTGGGCAAAGAAAGATGTGAGGCGTGGCAATTGAGTTTCTTCGTTTAGCGATGAAGAATTATTGTTTACAAATTTACCCTTGAGACTTTAATAAAATGAGGTATTATTTGAAAGAAAAAAAATTGATCCCTAAAAGATTAAATTCTAATTATAAACTATAATAATTAAATTTTAACTTTTATTCTAGCTATATATATATATCAAAATTTACCATTTCTTTAGAAATCTTTAACCTACAAGAATTTGTTATTTGTGAGAGAATACTGAAATAATTTTATAATGCCTCGAAGTTAACACTATTTTTCAACTTTTGTCTCTTTAATATATTGAAACAAAGTAAAATACCATTTTTGATCTATTTGCAGTTTGAGTTTCATTTCAATTTATTTTTTAGTTTTTAAATAAATCTTAAAATTAATTAAAATTAGTTAAATAATAATAATTATTTCCTTGAAAAAATATAAAATGTAAATACATATTTTTAAAATTCATAAGAAAAACTAATAGTGGGAAGATACTAAGCATTTTGTATGTTTGAGTAGAAAATTATATATATAAATATTTTAATCAATTGAATTATGCTTAATAAAATTTTAAAAAAATCATATGATATTGATACTTAATAATTTAGAGTGTCAAAATTAGAATGCATTCATGGACATTATTGACACAAATTAAAATATGTGTATAGAAAAAAACTCAAGAAAGAAAGAATTAAATGTAGAAAGTGATCAATTTAAACATATAGTTAAGTAGTAATTGATATATACATATTATTCACTTGAGGTTGGAGATCTGGTTCTAAACATAACATTATATCCATATTTGTTGTAACTAGAAAAGTAACAAAAAAAAAAAAAAAAAGACAACAAATAGAGGGAGTGAGAAAGCTATAGTTATTACTAATTTAAGCATAGGTAAATTTATTGAATCATTTATCTCCAAATCAATTGACTAATTGAGAGGAGTAACTAATGATCCATGTAATTTACAAAAGACTATGAGAGATTTCTTCATCGTGTTTTTGACGTGGAATCCTTAACATTTTCTAATTCAAAAGGGTGCCTCTTTGAGTTCACCATTTTTAGATTGAATCATGTTGAAGAAAATTACGATCTAATTTATAGTAATTTTTATTTCTAGTATTTTCCTTATCCGTACTTTTTCCTTTTATGCTATTTTCCTTTATTGTATTATTGAACTAATCTATTTATCATGCAATTCATTGTATTCTCATTCTTCAATAACATATACAAATTTCACAATCTCAACCGATGACCTTATATTAGATAAACACGAAGTATATGAGATGTTCTATATATCATTATTAATATATATTTGGGTTGTGACAATAAATAATGTGGAGTTCTTGAAACAGTGTTTTGGACATTATTTCAAACGACAGTGTCATTGTCACCTTTTGGTTGTCTGTTTGTTGTTTGCAATATTTAAAAAGAAATTCTGTTTGCCTCTCTTTTTTCTCTCATCTTCCATACCTTTTGCCTTAGGTTTTTGCAGGTCCCCCCCTTCTCTCTTCTCTCTTCTAGGGTTTCTCCATCCTTTTTTCCCCACCTTTTTTATTTACCCTAAAATTAATTCTTCCATAATTCCCTCTTCTTGGAAATTAATTTATATATGTCTCCTCCTTTTTTCCTTTCCACTCTCTCAACCTAATTAAGAGCTTCAAACCAACTTCTGGAGGAACGAAGCATCTCAAAAGGGTAACCCTAAAATTTAACTTTTTCTTACTTAATTTTATGATGTTATTTTATGCTCATCAACAAGAACTTAGTAATTAGATCTACTTAATTAAATTAAAATTGCTTCATGGAATTTTTTTTTTTTTTTTTTTTTTTTAATTTTTATTGTCCTGCCTATTTGTGCTTTAGGGTCATGAATGAAATGAGATGGAATTGATATAATTTCAGTTCAACTATTGGAGGATCAAATCATGCCTATTGAAATATATATAATTGGATTCAAATTATAGAATTATATATTTAATCATTTGACAAAAATTAACTTTTTTTTTAAAAAAAAACTTGAAAAAAAATAAAAATAAATTTTCTTCTAATACAAATGACTAAAAATGAAATCGTCATCAAACTTTTACTAAATTATGTTGTAGTATAAAGGAAGGTGGGATTTTTAATGTTTCAGCTGCAGAAACAGTAATGTGTGTGCTTTGTGCAGTGAAGAGAAATGCAATTCATTCAATTTTGAATTCCTCAAAAATATAAAAATAAAAATATAAAAAAATAAAAAAGAATAATTACTTTAATAGTTTAAATCTTTTAGGTCGATAGTGGTTTATGAAATTTAAGGAGAGGAAAAATAGTTTTTATTTTTTTTATTTTTTTATTTTTAATAATGAAATCATTTAATGTTATGTCAATGTTATTTTGGAGAGAAATTAAATAAATATTTTGACCCATGTATTTATTGGTTGCTGTAGCAGTGATCATATTATTATTTCGCTGGCCAAATAATTTTTTTCATTATGAAGTCAAAATATATACACACATTTATATGTACCTGTAAATGCAAATTAATTAATTAATTAGCCTATCAAAGCACAATATAAAACGCATAATTTGAACCTTTTCATCAATAATTTTATTTGTGATATAATATTTAAAAAATTATCTACCACTGATGTGGCAGAATTGAAATAGGTCTATCTATTTACTATATATAACCATTTTTAGTATAACCAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAGGCAATAAACTTTTTTTTTTTTTTTTTGAAAATATACGTCTTGATTTCTTTTGATGTATTAAGTAAATTAATTAATAATGAAGCGAATAATTCATATATCTTAAATGTAAACTTCTCAATCCGTTTTATCTAAATTATATGTAACATAACGAAAATAAAATACGGCAAAAGGCAAAACCATCCCTTAAAAGAGAGAAGAAAATCAATAAGGAATTTACTTATTATTAATATTATTATTTTAATAGAGAGAGATCTCATTCTTTTTAAGAGTTTTATTTTTATTTTTATTTTTTAAATAATTTAATTGCAAATGTTTTGGTTATTGATATATAACCTATAAGATAGTATCAAAGCGAGCATATAGTTCAATTAGCATACGATATATGTTAGAGTACAAGAGATCTGCAGTTTGAATCAACACACTGTTATTTTATTTAAAAAAAACTTACAGATAGCAAATTCGAGTAAAAACCTAATTTTATTTAGTGGAAAAAGCAAACCATTTAATTTGTATAATTTAATTCTTTAGGAAAGGATTAATTTAGAGAAAGGGAAGGGGATGAATAAAATCCTTCCTTATTTGCATACATTTCTAGCCAAATAATAATAAATGCAACAAAAGAACAAGCTTTTTAGATTTATGTTAGCTACTTTAGGTACAAAGTTATTCCATCATTAATAAATTAAATGATATTATAATCGATCATTGAACCCTTTCCCATTTGAAAAACTAATCATAAACTATATATTAATACATCCAAATAATTGAAAATAACAAATCAATATTTCATCGTTATATGCCATTAAGTGATGTATTATTTTATTTCGTGAGCCCTTTATAACTAAAAATTCTCCGTATATATTGTTTAGTTTTTGTTGATAGAAAGGAAAAAAAAAAAAAAAGAATATGGCTTCTTCAAGCTTCTCAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCCGATTGCATATTTGCGCCCTACTTTCCTCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTCCAGCCCCATCAGCGCGAGGACGCCGTAAATTCTCTAGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGTTGTGTCGGGGCCATCTCCGCTCTACAAAGACAAGTCATTCGCTTGCAGAAAGAGCTCGATGCTACAAATGCTGATTTAGTGCGATATGCAAGCGGGGGCGCTCGCCCGCCCTCGCAATTTGGAAGAAGGGCAGCAACTGCCTCGATGACTCGCCATCATTCTGACCTGTCTTTTCTTTCTCCCTTGAGTAGTAATGATCATGATGATCCTTATTGCCATGATAAAGAGGAAGACAATTGA

mRNA sequence

atgtttgtcgatacgattgctaagtgggcaaagaaagatgtgaggcagcttcaaaccaacttctggaggaacgaagcatctcaaaaggcatgcaaattcctaagaagaaaatgcttagccgattgcatatttgcgccctactttcctcctgaagagccaaccaaatttgccaatgttcacaagatctttggagccagcaatgtgagcaagcttctcaatgaggtccagccccatcagcgcgaggacgccgtaaattctctagcctacgaggccgaggctcgtatgaaagaccccgtctatggttgtgtcggggccatctccgctctacaaagacaagtcattcgcttgcagaaagagctcgatgctacaaatgctgatttagtgcgatatgcaagcgggggcgctcgcccgccctcgcaatttggaagaagggcagcaactgcctcgatgactcgccatcattctgacctgtcttttctttctcccttgagtagtaatgatcatgatgatccttattgccatgataaagaggaagacaattga

Coding sequence (CDS)

ATGTTTGTCGATACGATTGCTAAGTGGGCAAAGAAAGATGTGAGGCAGCTTCAAACCAACTTCTGGAGGAACGAAGCATCTCAAAAGGCATGCAAATTCCTAAGAAGAAAATGCTTAGCCGATTGCATATTTGCGCCCTACTTTCCTCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTCAATGAGGTCCAGCCCCATCAGCGCGAGGACGCCGTAAATTCTCTAGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGTTGTGTCGGGGCCATCTCCGCTCTACAAAGACAAGTCATTCGCTTGCAGAAAGAGCTCGATGCTACAAATGCTGATTTAGTGCGATATGCAAGCGGGGGCGCTCGCCCGCCCTCGCAATTTGGAAGAAGGGCAGCAACTGCCTCGATGACTCGCCATCATTCTGACCTGTCTTTTCTTTCTCCCTTGAGTAGTAATGATCATGATGATCCTTATTGCCATGATAAAGAGGAAGACAATTGA

Protein sequence

MFVDTIAKWAKKDVRQLQTNFWRNEASQKACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATASMTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN
Homology
[Close]
BLAST of Clc09G21040.1 vs. NCBI nr
Match: XP_038890699.1 (LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 7.2e-76
Identity = 145/151 (96.03%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 132

Query: 150 MTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           +TRHHS LSFLSPLSSNDHD  YCHDKEE N
Sbjct: 133 ITRHHSGLSFLSPLSSNDHDASYCHDKEEGN 163

[Close]
BLAST of Clc09G21040.1 vs. NCBI nr
Match: KAA0037575.1 (LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB domain-containing protein 25 [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 142/153 (92.81%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           +  TRHHS LSFLSPLSSN HDDPYCH+KEE N
Sbjct: 133 VSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]
BLAST of Clc09G21040.1 vs. NCBI nr
Match: XP_008458802.1 (PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDICTED: LOB domain-containing protein 25 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 7.5e-73
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           +  TRHHS LSFLSPLSSN HDDPYCH+ EE N
Sbjct: 133 VSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]
BLAST of Clc09G21040.1 vs. NCBI nr
Match: XP_011655399.1 (LOB domain-containing protein 25 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 8.3e-72
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           + TRHHS LSFLSPLSS+ HD  YCHDKEE N
Sbjct: 133 VSTRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]
BLAST of Clc09G21040.1 vs. NCBI nr
Match: XP_022991035.1 (LOB domain-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 3.2e-63
Identity = 128/151 (84.77%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASGGARP   +GRRAA   
Sbjct: 74  EAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP---YGRRAAA-- 133

Query: 150 MTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
                S + F+SPL+SND  DPYCHDKEE+N
Sbjct: 134 ----QSGVCFISPLNSNDRHDPYCHDKEEEN 155

[Close]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-48
Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQREDAVNSLAY
Sbjct: 42  ACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAY 101

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYAS--GGARPPSQFGRR 145
           EAEAR+KDPVYGCVGAIS LQRQV+RLQ+EL+ TNADL+RYA   GG    +  GRR
Sbjct: 102 EAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTSAYGGRR 158

[Close]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-45
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRY 131
           EAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 74  EAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-37
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLLNE+ P QREDAVNSLAY
Sbjct: 12  ACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAY 71

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGG 135
           EA+ R++DPVYGCVG IS LQ Q+ +LQ +L    ++L +Y S G
Sbjct: 72  EADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLG 116

[Close]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-35
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P QREDAVNSLAY
Sbjct: 36  ACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAY 95

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPS 140
           EA+ R++DPVYGCVG IS LQ  + +LQ++L     +L +Y +  A   S
Sbjct: 96  EADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

[Close]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-35
Identity = 72/131 (54.96%), Postives = 93/131 (70.99%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLLNE+ P+QREDAVNSLAY
Sbjct: 41  ACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAY 100

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EA+ R++DPVYGCV  IS LQR + +LQ++L     +L +Y    A   +     A+T +
Sbjct: 101 EADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAA---AAAAASASTGT 160

Query: 150 MTRHHSDLSFL 161
               HS   F+
Sbjct: 161 NNGPHSMAEFI 168

[Close]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match: A0A5A7T800 (LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00190 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.6e-74
Identity = 142/153 (92.81%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           +  TRHHS LSFLSPLSSN HDDPYCH+KEE N
Sbjct: 133 VSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

[Close]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match: A0A1S3C8P8 (LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.6e-73
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M--TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           +  TRHHS LSFLSPLSSN HDDPYCH+ EE N
Sbjct: 133 VSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

[Close]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match: A0A0A0KSE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.0e-72
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY
Sbjct: 13  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 72

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASG ARPPSQ+GRRA TAS
Sbjct: 73  EAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPPSQYGRRATTAS 132

Query: 150 M-TRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
           + TRHHS LSFLSPLSS+ HD  YCHDKEE N
Sbjct: 133 VSTRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

[Close]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match: A0A6J1JRR4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111487747 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 128/151 (84.77%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASGGARP   +GRRAA   
Sbjct: 74  EAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP---YGRRAAA-- 133

Query: 150 MTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
                S + F+SPL+SND  DPYCHDKEE+N
Sbjct: 134 ----QSGVCFISPLNSNDRHDPYCHDKEEEN 155

[Close]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match: A0A6J1E293 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430146 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.9e-62
Identity = 126/151 (83.44%), Postives = 132/151 (87.42%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATAS 149
           EAEARMKDPVYGCVGAIS LQRQVIRLQKELDATNADLVRYASGGARP   +GRRAA   
Sbjct: 74  EAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP---YGRRAAA-- 133

Query: 150 MTRHHSDLSFLSPLSSNDHDDPYCHDKEEDN 181
                S + F+SPL++ND  DPYC DKEE N
Sbjct: 134 ----QSGVCFISPLNTNDRHDPYCRDKEEQN 155

[Close]
BLAST of Clc09G21040.1 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+L+EV PHQREDAVNSLAY
Sbjct: 42  ACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAY 101

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRYAS--GGARPPSQFGRR 145
           EAEAR+KDPVYGCVGAIS LQRQV+RLQ+EL+ TNADL+RYA   GG    +  GRR
Sbjct: 102 EAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTSAYGGRR 158

[Close]
BLAST of Clc09G21040.1 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRY 131
           EAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 74  EAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]
BLAST of Clc09G21040.1 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRY 131
           EAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 74  EAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]
BLAST of Clc09G21040.1 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRY 131
           EAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 74  EAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]
BLAST of Clc09G21040.1 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 30  ACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAY 89
           ACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PHQREDAVNSLAY
Sbjct: 14  ACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAY 73

Query: 90  EAEARMKDPVYGCVGAISALQRQVIRLQKELDATNADLVRY 131
           EAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 74  EAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:
BLAST of Clc09G21040.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890699.17.2e-7696.03LOB domain-containing protein 25-like [Benincasa hispida] >XP_038890700.1 LOB do... [more]
KAA0037575.12.0e-7392.81LOB domain-containing protein 25 [Cucumis melo var. makuwa] >TYK03097.1 LOB doma... [more]
XP_008458802.17.5e-7392.16PREDICTED: LOB domain-containing protein 25 [Cucumis melo] >XP_016902322.1 PREDI... [more]
XP_011655399.18.3e-7292.11LOB domain-containing protein 25 [Cucumis sativus][more]
XP_022991035.13.2e-6384.77LOB domain-containing protein 25-like [Cucurbita maxima][more]
BLAST of Clc09G21040.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8Q31.7e-4879.49LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... [more]
Q9FML43.1e-4586.14Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
O044791.8e-3767.62Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Q32SG32.2e-3561.82LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1[more]
A2WXT02.2e-3554.96LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P... [more]
BLAST of Clc09G21040.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T8009.6e-7492.81LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C8P83.6e-7392.16LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV... [more]
A0A0A0KSE84.0e-7292.11LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV... [more]
A0A6J1JRR41.5e-6384.77LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148774... [more]
A0A6J1E2934.9e-6283.44LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430... [more]
BLAST of Clc09G21040.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27650.11.2e-4979.49LOB domain-containing protein 25 [more]
AT5G63090.22.2e-4686.14Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.32.2e-4686.14Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.12.2e-4686.14Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.42.2e-4686.14Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..180
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 26..143
NoneNo IPR availablePANTHERPTHR31301:SF12LOB DOMAIN-CONTAINING PROTEIN 25coord: 26..143
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 30..123
e-value: 9.3E-40
score: 135.2
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 26..127
score: 25.529339

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc09G21040Clc09G21040gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc09G21040.1-exonClc09G21040.1-exon-ClcChr09:34550085..34550539exon
Clc09G21040.1-exonClc09G21040.1-exon-ClcChr09:34552510..34552551exon
Clc09G21040.1-exonClc09G21040.1-exon-ClcChr09:34554208..34554253exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc09G21040.1-cdsClc09G21040.1-cds-ClcChr09:34550085..34550539CDS
Clc09G21040.1-cdsClc09G21040.1-cds-ClcChr09:34552510..34552551CDS
Clc09G21040.1-cdsClc09G21040.1-cds-ClcChr09:34554208..34554253CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc09G21040.1Clc09G21040.1-proteinpolypeptide