Clc09G19720.1 (mRNA) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAATATGTACTTTTCTCAATAATTTTTTTTTATAAAAACATTAAATCTTGTATTTTTAAAAACCTAGTTTATATAAAACATTAATTACATCTCTTTTATTTAAGGGCGTGATTGGGATGCCGTGTCAGTTGAATTGTTTGGAAGGAAACTGAAGTCCGATCGTAGTTTTGCTTTGGGCATCGCGGAATCGCCATTTCTTAAAGGCTTTGAATTTGATGCTCTCTTCAGAGTTGCATTCAACCTAATCTGCCGGAGATCAATCAAAATGCTGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTATTGTTATTCACTTTTCCTTTTCCGATCCAATGCTTTATCTTCTCCAATCTGAATTTGGACTGTATCATGATCATCTCTATTCTGTTTTAAAATTGAGACTTCTCTCTCTCTCTCTCTCTCTCGTTTTTGTGTATTTGTTTAGATCATTAGTTTGTGGTAATGGAGGTTCTTATTAATTAGGTCAGTTCGCCTCACGGTAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACTGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAAGTGCTGAAGTTTCTCTTTTTTCTTTCTGGCTTACACATGGATGCATTTGCTCATTGTTTGGTGTTTTAATTTCTTAACAATTATCCTTACAACAATTAATTTTGCATGATATTATGTTATTCTTTGAATAATTATGATGAACTTGTGGACATTGTGGTGGCTGTGTTCGTGTTAGATCATAATTTGATTTGATATACATTCAGTTTGTTTAATAGGTTTTCTCTCCTTTTGCTTCCTTAAAATATCCTTAAAACAATTATGTTTTCAGCAAGAATCTCCCCCCCATTTTTTTCACTATAGAATCAAGCAGAAGGAGACCAACCTCAAGACAGTGTCAATGATATCATTTCTCTCCTGCACAACCAAGCGAAGAACTTTTAACCTTCTTTGGGATGTTCACCTTCTTGAGGTTGGCCCAAAAAAGAAAAAAAAAAAAAAAAGAAATGGGCCCTCATAAAGCGAGAGGAGATGAAGTGTATAATGGGAAAAGAAGAAAGAAACAAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAAGATGCTGCCAGAGAAAACACCAGAGAAATAGAGGATCCAAATTCTTTTTATTCTGAATGGTAGCACTAAGGACCACCTCACTGGTTGAAGGTGAGCCATCATTTAAATTCCTTTTGAAGCTAAAATTGAAGGGGACCCTTGAAGCGAAAAATGCCAAAGAAACCATAAAATTCTGGAGGAATGCAAAGTCCAGATCCTTTTATCTAGAAGTAAGGACTACCCTAATGATGGAGGCAGGATTATCATTTGAATTCCTGTTGAAACTGAACTAAGAGGATCATGCCTGTGGATCACAGTATCTGGGTTAGAGATATAAAAAATAAAACTATAAAAGGACAAAAGCAAAAAGGAATATAAGTCTTTCATATACAATGATTATTTATGGGTTCGAGTGGCTCCTAATTTATGAAGTTTATGCTGATGTTTTCATCATATGGTCTCAATATGCTACTCTAGATCTCATAATGTATGACATGATTGAAATATAATAAAGAATGTATACTTTCACCCATGTGTCCTTGTCTAAACTGCATTTGCATCTCATTATTCTTGTGGCCCATGTCCATATCTTTTAGAAGGTGTTGGGGTAAGGAGTGGAATAGTGAAGAGTAGGTGGGAGTTGTAAACTCTTGGGACCCACAGTGTAAGGAGTTGATAAAATATAAAATTTGATGTTTTTTAGTAGTGGAGCGCACCAACTCTTTGGGCCAAACTGGGAGTGGAGTTCACAAACTCTTGCTTCCATACTTCTACTTTACAACTCCTTGGGCCAAACACACCCTTAGGTATTTATTATATCACATTTCACAAGACATTATTTTTCCATGGAGTTCTTTTTTTTTCTCCCCATAATAATATGTTAAGAGTTCCATTTATTTCAATAAGGATCTTTTGAGATTCTGTTTTGAACTCTTCTCTACATAAATGTAGAAGATGGGCTCTCATTTTTGTTTTATAGACGAATCTGTCTGAAATAGTTCATCATCTCTTATGCTAGGTAATGGAATTTGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGGTACACACTATAATGAATTGAGTTTCTGAAGAGCCTATAAGGAAATGGCAGCATCTCTCTTGCCTTGGGGGGAATATGATCTTTTTTTACATGGCATCATTCATCATAACCATACAGAATTTGATTAGAAAGATACTCGATTAAGATTTATTCTGCTACAATGTGACGATATTCCTCAAGAGAACTTAGTTCATTGTATCTTTGTGGGCTCTGTACTTTGTAGATTCATTTCATTCTGTCTGAGTTGATGGTGTGACGATTGATTCTCTACTATTATTGTTTGGTTTTCAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCTCCCACTCTTTACTTCTGATATATTCTTTTTTAAAAAATTCTGTCTTTTTCTTTTCCTTTTTAAAAAATTTATTTTATTTTCATTTTGGGCTATTAGATGCAACAGTTTATGCTGGACTTGAATATAGGGAGCAGTTCCGAGTTCCCAAGCTAATTGAAAGAAAATATATGCTCATTATTATTTTCCCTTTTAAGAACCATCTGGTTTACATCAACATAATATTCTTAAATATATGATGTTTTCCTTCTACTGTTTAATAGGTTG TAAATATGTACTTTTCTCAATAATTTTTTTTTATAAAAACATTAAATCTTGTATTTTTAAAAACCTAGTTTATATAAAACATTAATTACATCTCTTTTATTTAAGGGCGTGATTGGGATGCCGTGTCAGTTGAATTGTTTGGAAGGAAACTGAAGTCCGATCGTAGTTTTGCTTTGGGCATCGCGGAATCGCCATTTCTTAAAGGCTTTGAATTTGATGCTCTCTTCAGAGTTGCATTCAACCTAATCTGCCGGAGATCAATCAAAATGCTGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTCACGGTAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACTGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTTGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCTCCCACTCTTTACTTCTGATATATTCTTTTTTAAAAAATTCTGTCTTTTTCTTTTCCTTTTTAAAAAATTTATTTTATTTTCATTTTGGGCTATTAGATGCAACAGTTTATGCTGGACTTGAATATAGGGAGCAGTTCCGAGTTCCCAAGCTAATTGAAAGAAAATATATGCTCATTATTATTTTCCCTTTTAAGAACCATCTGGTTTACATCAACATAATATTCTTAAATATATGATGTTTTCCTTCTACTGTTTAATAGGTTG ATGCTGAAATGGAGTTTCTTGATTTCCATTCTTTTGGGCCTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTCACGGTAACACGTATCATAATGCGGATCATGTGGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACTGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTTGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGA MLKWSFLISILLGLMFTVADSMRFDLQSGATKCISDDIKTNAMTVGKYSVVNLNEGFPIPDSHKLTVRVSSPHGNTYHNADHVESGHFAFTAAESGDYTTCFWAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQVEVMEFELKKLYDTVISIHDEMFYLREREEEMQQLNRSTNAKMATFSFLSLGVCLSVAGLQLWHLKTFFERKKLL Homology
BLAST of Clc09G19720.1 vs. NCBI nr
Match: XP_038890728.1 (transmembrane emp24 domain-containing protein p24delta9-like [Benincasa hispida]) HSP 1 Score: 401.0 bits (1029), Expect = 6.4e-108 Identity = 199/211 (94.31%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of Clc09G19720.1 vs. NCBI nr
Match: XP_022134512.1 (transmembrane emp24 domain-containing protein p24delta9-like [Momordica charantia]) HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103 Identity = 187/211 (88.63%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of Clc09G19720.1 vs. NCBI nr
Match: XP_022993670.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita maxima]) HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103 Identity = 189/211 (89.57%), Postives = 201/211 (95.26%), Query Frame = 0
BLAST of Clc09G19720.1 vs. NCBI nr
Match: XP_008459344.1 (PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo]) HSP 1 Score: 384.4 bits (986), Expect = 6.2e-103 Identity = 190/212 (89.62%), Postives = 199/212 (93.87%), Query Frame = 0
BLAST of Clc09G19720.1 vs. NCBI nr
Match: XP_023551023.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita pepo subsp. pepo] >KAG6578566.1 Transmembrane emp24 domain-containing protein p24delta7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016124.1 Transmembrane emp24 domain-containing protein p24delta7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102 Identity = 188/211 (89.10%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 4.5e-72 Identity = 131/204 (64.22%), Postives = 166/204 (81.37%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.2e-70 Identity = 124/207 (59.90%), Postives = 164/207 (79.23%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.4e-65 Identity = 119/208 (57.21%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 7.0e-65 Identity = 120/208 (57.69%), Postives = 160/208 (76.92%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.7e-63 Identity = 120/211 (56.87%), Postives = 160/211 (75.83%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy TrEMBL
Match: A0A6J1BZT5 (transmembrane emp24 domain-containing protein p24delta9-like OS=Momordica charantia OX=3673 GN=LOC111006738 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104 Identity = 187/211 (88.63%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy TrEMBL
Match: A0A6J1JZ64 (transmembrane emp24 domain-containing protein p24delta7-like OS=Cucurbita maxima OX=3661 GN=LOC111489593 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103 Identity = 189/211 (89.57%), Postives = 201/211 (95.26%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy TrEMBL
Match: A0A1S3CAG6 (transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo OX=3656 GN=LOC103498505 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103 Identity = 190/212 (89.62%), Postives = 199/212 (93.87%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy TrEMBL
Match: A0A5D3BN42 (Transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002690 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102 Identity = 189/212 (89.15%), Postives = 198/212 (93.40%), Query Frame = 0
BLAST of Clc09G19720.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ20 (transmembrane emp24 domain-containing protein p24delta7-like OS=Cucurbita moschata OX=3662 GN=LOC111444716 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.3e-102 Identity = 187/211 (88.63%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of Clc09G19720.1 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 272.3 bits (695), Expect = 3.2e-73 Identity = 131/204 (64.22%), Postives = 166/204 (81.37%), Query Frame = 0
BLAST of Clc09G19720.1 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 266.2 bits (679), Expect = 2.3e-71 Identity = 124/207 (59.90%), Postives = 164/207 (79.23%), Query Frame = 0
BLAST of Clc09G19720.1 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 250.8 bits (639), Expect = 1.0e-66 Identity = 119/208 (57.21%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of Clc09G19720.1 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 248.4 bits (633), Expect = 5.0e-66 Identity = 120/208 (57.69%), Postives = 160/208 (76.92%), Query Frame = 0
BLAST of Clc09G19720.1 vs. TAIR 10
Match: AT3G29070.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 243.8 bits (621), Expect = 1.2e-64 Identity = 120/211 (56.87%), Postives = 160/211 (75.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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