Clc09G09030.2 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc09G09030.2
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ethylene-responsive transcription factor-like protein
Location	ClcChr09: 7774491 .. 7778357 (-)
Sequence length	1094
RNA-Seq Expression	Clc09G09030.2
Synteny	Clc09G09030.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTGTGGGGAGATCCCTTCGTTTTATCAATTTGCATCAGTTGTAGAAGCTGGAAAAATGCTTTTGGCCTCTAATCATGATGCTATCTTGATGATTTTATCAGTAACTGCCACGAATATGTAAACGAAAAACGTGTTCTCTGTACTGTTTAGCCTTTCTCCTCTCTCACTATCTTCTTCATTATCCTTTCTTCTAAACGTAGTTCATGTGTTCTTTGGATGGTAAGCACCAGTACGAATAAATGGAGCCCTCAATCCACCATCTTCTAATGAGTATTTTATAAAGTGAAAGGTGAAAATTACTTTCTTTTTGGGTGATTGTATTCAGCTTGAAGCATGGACATGAATGCTTTAGGATTATGTTTCCATATTTAGGCTGATGTACCAAAAGGAGAAACTTCTAATGTATTCAGTATCTCCCAAGATATTATTAATGAGCTTCCACTGTTGGTGAATTGAGTCTCTTGTTTTGTTCAATATCCTTATTTTCCAGCTTTATCAATTTTTTTGAGTCTTCATGTTCACAACAATGTTTAATATACTCTGTATAACATCAAAGGTTACATTCAAAATGTGACTGTAACTGCCTTTCCTTTGCATCCAAGGTGGGGCGGATTCATGATAAACAATTGGTTGCATACATTGTGCACGACGTGAAGATCAACATCAACTATGGTGAGCTTAAGAAGGCGCAGGCTCTTAGGACTATGCTCCGGTGCGTTTACATATTCTTGTGAGATAAATGATTGTTTGTTGAATAAGCAATCATCATTAATTTTTCTTTGGTGATACTTTCTAAAAAGTTTGTATTTTGTCTTTCTTTCCTAGCTCAAAAGGTTCATAATTTGATTAAACATGTTTGTTGAAATTTTCTGAGATATTTCAGGGAAAAGTTCATTTGTAGCTCCACTTCCTAAGTTTTCAGAAAATGGAACTGCTCCCGAAAATCCTAGTCCGAGTAACAAACTTGTCACTTTGCATCCCATGTCTTCTGATGATGTTAAAATCACGGATAGGGTAAGACGACAAGCTTGAACTTTTTTTTCTGACAATTTTGCATATACACATGACCGTGATAGCGTTTAATTATTCTCATATGCAAGTTGATAGCGTTTAGATTTCTACTTGGTTCTTCTAATTTCATTAATGAATATTGATATTGGAAGTGATAATTGCTTCTGAATAACTTCATCGGTTAAGCTTTGTAGATTTTGTTGATAAAAGCCGGTGAAACGTTTTCTGCATTTCATTATTTGCATGTTACTTTAAACAGTTGTTCTAAAATCTTATTCTGTACTATATGGAGATCTGTGACTGCTTCACATTTTTCTTATTAAATGCTTTTATTCTGAATTGGCCAAGAATATTCTAAAACACCAATAGCTGATAGAAAAGGTTTGTTTTTAAGCTTCGTCTCCAGTAATATTTTTGACCTTTTAAATATGCTGCTGAAATTCGAGATGGCAGTCTGAGATCTTTCAACGCTCTTGCTTCCATAAGTTAAGATGAATCTGCAATACAACTATGATGTCAACCTGACTGAATGAAAGGGAAATGTTGTCAATATATACATTGTATTTTCTCTTTCTTTACAAAAGCCTGTGAAGTTCTCGAGCTTTCGAACTTGAACCCGTAATTATGGAGATAAGGATGAAACTTCACTAACTAATAAACGTGAAATCCTTCCTTTTCTATTTCATTGGATTCTTAAACTACACATTTTTAAGGACGCTAAGATTTTACGAGCTCATGTGCCTGACTTGATTTTACAAGTTTGTCATTCAGAGGATCTTGTTGATGACCATTTAACGAATATATAATTCTATCACAATTTGATTTATTTCACTTCCCTTGAAAAATCTGACATATAATCTGACAGTTATTTTCCAACTTTGGTCTTTTGTTATAGAGCTCTATTGTAGATATGGAATCCAGTTTCGCAAATGCATTGGATTGGACCTCGCCGAATGAACAGTCTAATCAGCCTATTTCAGGTTATCAATTAAGAAACATGTTAATCAGACAATCATAGTTTCGTCATTGTTTGTTTGTGGTTTGCTTTTGAGATATTTAGTTTTTGTGACACTTATTTTTGTTTAATATTACTGTGGCTTGGCCATTCTTTCTTTCCCGTTGTAATGAAATGGAAATCTAATATATGTAGTTCAAAATTTTGAATTTGTTTGTTGTAATTTAGAAGTAACAGATTGATCCTATCGTAGTTCCTTGCGACTGATTTTGTGGTTGGGGCATATATCATTTCATTTATAATTTGAACGGTTTACGAATGCCACGAAGTAAGACACTTGCTTTATGCATGAGCACCTTATTAGCACGACAACTATTGTAATTGTCAGTCTTGCCCTATGTCATTGTGCACACAATTTTCGAATTCAACTACTACCTGCATTTTGTCTCTCTTAATACATGGACATGTGTTTGTAGGGCATCCACTAAAACATAGAAAGAGACATAGGAGAAGGAACTCTCATAATCAAGAACTATCAATCATGAGGGGTGTCTACTTTAAGAACATGAAATGGCAGGCTGCAATTAAGGTCGACAAAAAACAGATACATTTAGGAACATTTGGTTCACAAGAAGAGGCTGCACATTTGTATGACAGGTATACATTTTCCGAATCATTTCTTATATCACTTTTAACCATAAGAAACTGGCCATCATACTATTTTTGTCGAAACGATCATCTTAGAGCACTTATTCGAGGATGGCTAGACAATTTCTTTAAGTGGTTTGAGTTTCTAAGAATCTGTTATTGAAAGACAGAATCAACGAGTTATGAAACAGAATTTCATGTACCGAATTTCTAACCAAATTAACCAATGCACCATTCCTTTTATCTCTAAGGATTAAGAAACCAAATATAGACAAGCAAAGACAGAATTCTAAAAGTGCTAATTGGTACAATGTTCTGCATATTATAGTAAATCGGATAAGAGACAAGGTTCATGAATGGAACTTTAATTACGAACATATATGCATCAATTCGTAAATAAACGTTCATATATACATATATGTACATACACACATATGAACTCACCGTGGTATGATGGGCATCATTGTGTGGTTTAGCATTGAACTTAAGTTTACTACTGTGTATCATTTAGTTCATTTGCCTATGAAGTTGTTAAGTGAATGGGGACAAACTCAAGCTCGATTCACATTGATAAGCCTCCCATCAGTTTTGGATTGGTATTAGGTACGATAAGCTCACTTAGTCTTTCGGTTTTACAGAGCTGCTTTTGTGTGTGGAAGGGAACCAAATTTTGAACTCTCCAAGGAAGAGAAGCAAGAACTCCAAAAGTTCAAATGGGAAGACTTCCTTGCTATGACTCGACACGCAATCACAAACAAAAGTAGTTATCTCGCTACTCTCAGACTCTTCAATTTCTTTTTTTTTTCATATGTTAGATTCGGTTCATGATTAAATGCACCGTCTTTCAGAGCACAAAAGACTCAGCACAGGATCATCGCCAAAGAAGCTTGGAGCTTCGTCGCTGCAAATTGACAACAAGCAACTCAAGCAAAAATTCAACGAGTCTCCGGTAACAGAGGACATTTACTTCACTTGAGCTAGCTTTTAGCTCAAGAAGAATGGTAAATTTTTCTAGGTCCAACAGGTTAGGCCAAGTTGCTTGAACCTCCATTGAAATTCCTCCCTCCCAAGTAAATGTGTTTTTAGGCTAGAATACATTGCGTCTTCATGTGGTAAGTTCATAATTTTTTTCTTTTTCAATTGAAGCTTGTAATATGTTCCAATATAATTTACTGTTAATTTCTTTTTAGCACAAGCATATTGAATCGATATTGTAATGAAACAGAAGTTTGTAATTATTTTCATTAC

mRNA sequence

ATGCCTTGTGGGGAGATCCCTTCGTTTTATCAATTTGCATCAGTTGTAGAAGCTGGAAAAATGCTTTTGGCCTCTAATCATGATGCTATCTTGATGATTTTATCAGTGGGGCGGATTCATGATAAACAATTGGTTGCATACATTGTGCACGACGTGAAGATCAACATCAACTATGGGAAAAGTTCATTTGTAGCTCCACTTCCTAAGTTTTCAGAAAATGGAACTGCTCCCGAAAATCCTAGTCCGAGTAACAAACTTGTCACTTTGCATCCCATGTCTTCTGATGATGTTAAAATCACGGATAGGAGCTCTATTGTAGATATGGAATCCAGTTTCGCAAATGCATTGGATTGGACCTCGCCGAATGAACAGTCTAATCAGCCTATTTCAGGGCATCCACTAAAACATAGAAAGAGACATAGGAGAAGGAACTCTCATAATCAAGAACTATCAATCATGAGGGGTGTCTACTTTAAGAACATGAAATGGCAGGCTGCAATTAAGGTCGACAAAAAACAGATACATTTAGGAACATTTGGTTCACAAGAAGAGGCTGCACATTTGTATGACAGAGCTGCTTTTGTGTGTGGAAGGGAACCAAATTTTGAACTCTCCAAGGAAGAGAAGCAAGAACTCCAAAAGTTCAAATGGGAAGACTTCCTTGCTATGACTCGACACGCAATCACAAACAAAAAGCACAAAAGACTCAGCACAGGATCATCGCCAAAGAAGCTTGGAGCTTCGTCGCTGCAAATTGACAACAAGCAACTCAAGCAAAAATTCAACGAGTCTCCGGTAACAGAGGACATTTACTTCACTTGAGCTAGCTTTTAGCTCAAGAAGAATGGTAAATTTTTCTAGGTCCAACAGGTTAGGCCAAGTTGCTTGAACCTCCATTGAAATTCCTCCCTCCCAAGTAAATGTGTTTTTAGGCTAGAATACATTGCGTCTTCATGTGGTAAGTTCATAATTTTTTTCTTTTTCAATTGAAGCTTGTAATATGTTCCAATATAATTTACTGTTAATTTCTTTTTAGCACAAGCATATTGAATCGATATTGTAATGAAACAGAAGTTTGTAATTATTTTCATTAC

Coding sequence (CDS)

ATGCCTTGTGGGGAGATCCCTTCGTTTTATCAATTTGCATCAGTTGTAGAAGCTGGAAAAATGCTTTTGGCCTCTAATCATGATGCTATCTTGATGATTTTATCAGTGGGGCGGATTCATGATAAACAATTGGTTGCATACATTGTGCACGACGTGAAGATCAACATCAACTATGGGAAAAGTTCATTTGTAGCTCCACTTCCTAAGTTTTCAGAAAATGGAACTGCTCCCGAAAATCCTAGTCCGAGTAACAAACTTGTCACTTTGCATCCCATGTCTTCTGATGATGTTAAAATCACGGATAGGAGCTCTATTGTAGATATGGAATCCAGTTTCGCAAATGCATTGGATTGGACCTCGCCGAATGAACAGTCTAATCAGCCTATTTCAGGGCATCCACTAAAACATAGAAAGAGACATAGGAGAAGGAACTCTCATAATCAAGAACTATCAATCATGAGGGGTGTCTACTTTAAGAACATGAAATGGCAGGCTGCAATTAAGGTCGACAAAAAACAGATACATTTAGGAACATTTGGTTCACAAGAAGAGGCTGCACATTTGTATGACAGAGCTGCTTTTGTGTGTGGAAGGGAACCAAATTTTGAACTCTCCAAGGAAGAGAAGCAAGAACTCCAAAAGTTCAAATGGGAAGACTTCCTTGCTATGACTCGACACGCAATCACAAACAAAAAGCACAAAAGACTCAGCACAGGATCATCGCCAAAGAAGCTTGGAGCTTCGTCGCTGCAAATTGACAACAAGCAACTCAAGCAAAAATTCAACGAGTCTCCGGTAACAGAGGACATTTACTTCACTTGA

Protein sequence

MPCGEIPSFYQFASVVEAGKMLLASNHDAILMILSVGRIHDKQLVAYIVHDVKININYGKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDWTSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGTFGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLSTGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT

Homology

[Close]

BLAST of Clc09G09030.2 vs. NCBI nr
Match: XP_038899853.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Benincasa hispida] >XP_038899854.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Benincasa hispida] >XP_038899855.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 195/215 (90.70%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFV PLPKFSENGT PENPSPSNKLVTLHP SSDDV ITDRSSI +MESSFANALDW
Sbjct: 15  GKSSFVTPLPKFSENGTTPENPSPSNKLVTLHPKSSDDVNITDRSSIENMESSFANALDW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS NEQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  TSLNEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLST 238
           FGSQEEAA LYDRAA+VCGREPNFELS+EEKQELQKFKWEDFLAMTRHAITNKKHKRL T
Sbjct: 135 FGSQEEAARLYDRAAYVCGREPNFELSEEEKQELQKFKWEDFLAMTRHAITNKKHKRLGT 194

Query: 239 GSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
           GSSPKKLGASSLQIDN + K +FNE PV EDI FT
Sbjct: 195 GSSPKKLGASSLQIDNTEFKHRFNEPPVPEDINFT 229

[Close]

BLAST of Clc09G09030.2 vs. NCBI nr
Match: XP_038899850.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038899851.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038899852.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 195/215 (90.70%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFV PLPKFSENGT PENPSPSNKLVTLHP SSDDV ITDRSSI +MESSFANALDW
Sbjct: 18  GKSSFVTPLPKFSENGTTPENPSPSNKLVTLHPKSSDDVNITDRSSIENMESSFANALDW 77

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS NEQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 78  TSLNEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 137

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLST 238
           FGSQEEAA LYDRAA+VCGREPNFELS+EEKQELQKFKWEDFLAMTRHAITNKKHKRL T
Sbjct: 138 FGSQEEAARLYDRAAYVCGREPNFELSEEEKQELQKFKWEDFLAMTRHAITNKKHKRLGT 197

Query: 239 GSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
           GSSPKKLGASSLQIDN + K +FNE PV EDI FT
Sbjct: 198 GSSPKKLGASSLQIDNTEFKHRFNEPPVPEDINFT 232

[Close]

BLAST of Clc09G09030.2 vs. NCBI nr
Match: XP_004149780.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus] >XP_031745207.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus] >XP_031745208.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus] >KGN44632.1 hypothetical protein Csa_016504 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-100
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TA ENPSPSN L+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETATENPSPSNILITLHPKSSDDVNIKDRSSIVNMESSFRNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS NEQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  TSLNEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRL-- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS+EEKQELQKFKWEDFLAMTRHAITNKKHKRL  
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSEEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 STGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
           S GSSPKKLGASSLQIDN +LK +FNE+P+ EDI FT
Sbjct: 195 SAGSSPKKLGASSLQIDNTELKHRFNEAPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. NCBI nr
Match: TYK11601.1 (ethylene-responsive transcription factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.4 bits (960), Expect = 8.4e-100
Identity = 189/217 (87.10%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TAPENPSPSNKL+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETAPENPSPSNKLITLHPKSSDDVNIKDRSSIVNMESSFTNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           +S +EQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  SSLSEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLS- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS EEKQELQKFKWEDFLAMTRHAITNKKHKRLS 
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSDEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 -TGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
             G+SPKKL ASSLQI+N +LK +FNESP+ EDI FT
Sbjct: 195 NAGTSPKKLEASSLQIENTELKHRFNESPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. NCBI nr
Match: XP_008458053.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 [Cucumis melo])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 189/217 (87.10%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TAPENPSPSNKL+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETAPENPSPSNKLITLHPKSSDDVNIKDRSSIVNMESSFTNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS +EQSNQPISG+PLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  TSLSEQSNQPISGYPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLS- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS EEKQELQKFKWEDFLAMTRHAITNKKHKRLS 
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSDEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 -TGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
             G+SPKKL ASSLQI+N +LK +FNESP+ EDI FT
Sbjct: 195 NAGTSPKKLEASSLQIENTELKHRFNESPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-36
Identity = 92/188 (48.94%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 59  GKSSFVAPLPKF----------SENGTAPENPSPSNKLVT--LHPMSSDDVKITDRSSIV 118
           G + +V PLP            + N  A  NP P+  + T  +   + ++     RS  +
Sbjct: 15  GPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHM 74

Query: 119 DMESSFANALDWTSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAA 178
              S ++   D +  N  S  P    P K RK+HRR+  HNQE  +MRGVY+KNMKWQAA
Sbjct: 75  HFRSDYS---DISPVNSDSISP-KYQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAA 134

Query: 179 IKVDKKQIHLGTFGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRH 235
           IKV+KKQIHLGTF SQEEAA LYDRAAF+CGREPNFELS+E  +EL++  WE+FL  TR 
Sbjct: 135 IKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRR 194

[Close]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL
Match: A0A0A0K8E3 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G352440 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 8.2e-101
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TA ENPSPSN L+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETATENPSPSNILITLHPKSSDDVNIKDRSSIVNMESSFRNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS NEQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  TSLNEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRL-- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS+EEKQELQKFKWEDFLAMTRHAITNKKHKRL  
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSEEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 STGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
           S GSSPKKLGASSLQIDN +LK +FNE+P+ EDI FT
Sbjct: 195 SAGSSPKKLGASSLQIDNTELKHRFNEAPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL
Match: A0A5D3CIE2 (Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00460 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.0e-100
Identity = 189/217 (87.10%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TAPENPSPSNKL+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETAPENPSPSNKLITLHPKSSDDVNIKDRSSIVNMESSFTNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           +S +EQSNQPISGHPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  SSLSEQSNQPISGHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLS- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS EEKQELQKFKWEDFLAMTRHAITNKKHKRLS 
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSDEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 -TGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
             G+SPKKL ASSLQI+N +LK +FNESP+ EDI FT
Sbjct: 195 NAGTSPKKLEASSLQIENTELKHRFNESPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL
Match: A0A1S3C6H0 (ethylene-responsive transcription factor-like protein At4g13040 OS=Cucumis melo OX=3656 GN=LOC103497593 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.9e-100
Identity = 189/217 (87.10%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TAPENPSPSNKL+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETAPENPSPSNKLITLHPKSSDDVNIKDRSSIVNMESSFTNALEW 74

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS +EQSNQPISG+PLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 75  TSLSEQSNQPISGYPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 134

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLS- 238
           FGSQEEAAHLYDRAAFVCGREPNFELS EEKQELQKFKWEDFLAMTRHAITNKKHKRLS 
Sbjct: 135 FGSQEEAAHLYDRAAFVCGREPNFELSDEEKQELQKFKWEDFLAMTRHAITNKKHKRLSV 194

Query: 239 -TGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
             G+SPKKL ASSLQI+N +LK +FNESP+ EDI FT
Sbjct: 195 NAGTSPKKLEASSLQIENTELKHRFNESPLPEDINFT 231

[Close]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL
Match: A0A5A7SPL9 (Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00930 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 1.0e-98
Identity = 189/218 (86.70%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS++ TAPENPSPSNKL+TLHP SSDDV I DRSSIV+MESSF NAL+W
Sbjct: 15  GKSSFVAPLPKFSDHETAPENPSPSNKLITLHPKSSDDVNIKDRSSIVNMESSFTNALEW 74

Query: 119 TSPNEQSNQPISG-HPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLG 178
           +S +EQSNQPISG HPLKHRKRHRR+NSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLG
Sbjct: 75  SSLSEQSNQPISGWHPLKHRKRHRRKNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLG 134

Query: 179 TFGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLS 238
           TFGSQEEAAHLYDRAAFVCGREPNFELS EEKQELQKFKWEDFLAMTRHAITNKKHKRLS
Sbjct: 135 TFGSQEEAAHLYDRAAFVCGREPNFELSDEEKQELQKFKWEDFLAMTRHAITNKKHKRLS 194

Query: 239 --TGSSPKKLGASSLQIDNKQLKQKFNESPVTEDIYFT 274
              G+SPKKL ASSLQI+N +LK +FNESP+ EDI FT
Sbjct: 195 VNAGTSPKKLEASSLQIENTELKHRFNESPLPEDINFT 232

[Close]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL
Match: A0A6J1E2N6 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025467 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 9.7e-94
Identity = 178/211 (84.36%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 59  GKSSFVAPLPKFSENGTAPENPSPSNKLVTLHPMSSDDVKITDRSSIVDMESSFANALDW 118
           GKSSFVAPLPKFS+NGTAPENPSPSNKLVT+HPMSSDDV +TDRSS+V+ME +FA+A D 
Sbjct: 22  GKSSFVAPLPKFSDNGTAPENPSPSNKLVTVHPMSSDDVNLTDRSSVVNMEPNFASASDL 81

Query: 119 TSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGT 178
           TS  EQSNQP SGHPLKHRKRHRR+NSHNQEL+IMRGVYFKNMKWQAAIKVDKKQIHLGT
Sbjct: 82  TSQKEQSNQPASGHPLKHRKRHRRKNSHNQELTIMRGVYFKNMKWQAAIKVDKKQIHLGT 141

Query: 179 FGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHKRLST 238
           FGSQEEAAHLYDRAAFVCGREPNFEL ++EKQELQKFKWEDFLAMTRHAITNKKHKRL T
Sbjct: 142 FGSQEEAAHLYDRAAFVCGREPNFELPEDEKQELQKFKWEDFLAMTRHAITNKKHKRLGT 201

Query: 239 GSSPKKLGASSLQIDNKQLKQKFNESPVTED 270
           G SPKK GASSL ID    K +FN  P  ED
Sbjct: 202 G-SPKKPGASSLPIDTTDYKHRFNGFPSPED 231

[Close]

BLAST of Clc09G09030.2 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 92/188 (48.94%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 59  GKSSFVAPLPKF----------SENGTAPENPSPSNKLVT--LHPMSSDDVKITDRSSIV 118
           G + +V PLP            + N  A  NP P+  + T  +   + ++     RS  +
Sbjct: 15  GPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHM 74

Query: 119 DMESSFANALDWTSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAA 178
              S ++   D +  N  S  P    P K RK+HRR+  HNQE  +MRGVY+KNMKWQAA
Sbjct: 75  HFRSDYS---DISPVNSDSISP-KYQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAA 134

Query: 179 IKVDKKQIHLGTFGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRH 235
           IKV+KKQIHLGTF SQEEAA LYDRAAF+CGREPNFELS+E  +EL++  WE+FL  TR 
Sbjct: 135 IKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRR 194

[Close]

BLAST of Clc09G09030.2 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 92/188 (48.94%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 59  GKSSFVAPLPKF----------SENGTAPENPSPSNKLVT--LHPMSSDDVKITDRSSIV 118
           G + +V PLP            + N  A  NP P+  + T  +   + ++     RS  +
Sbjct: 35  GPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHM 94

Query: 119 DMESSFANALDWTSPNEQSNQPISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAA 178
              S ++   D +  N  S  P    P K RK+HRR+  HNQE  +MRGVY+KNMKWQAA
Sbjct: 95  HFRSDYS---DISPVNSDSISP-KYQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAA 154

Query: 179 IKVDKKQIHLGTFGSQEEAAHLYDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRH 235
           IKV+KKQIHLGTF SQEEAA LYDRAAF+CGREPNFELS+E  +EL++  WE+FL  TR 
Sbjct: 155 IKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRR 214

[Close]

BLAST of Clc09G09030.2 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-37
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 129 ISGHPLKHRKRHRRRNSHNQELSIMRGVYFKNMKWQAAIKVDKKQIHLGTFGSQEEAAHL 188
           IS  P K RK+HRR+  HNQE  +MRGVY+KNMKWQAAIKV+KKQIHLGTF SQEEAA L
Sbjct: 37  ISDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARL 96

Query: 189 YDRAAFVCGREPNFELSKEEKQELQKFKWEDFLAMTRHAITNKKHK 235
           YDRAAF+CGREPNFELS+E  +EL++  WE+FL  TR  ITNKK K
Sbjct: 97  YDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNKKPK 142

[Close]

BLAST of Clc09G09030.2 vs. TAIR 10
Match: AT5G57390.1 (AINTEGUMENTA-like 5 )

HSP 1 Score: 42.4 bits (98), Expect = 7.0e-04
Identity = 36/117 (30.77%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 115 ALDWTSPNEQSNQPISGH-----PLKHRKR-------HRRRNSHNQELSIMRGV--YFKN 174
           AL +  P   +N PIS +      +KH  R        R+ +  ++  S+ RGV  + ++
Sbjct: 256 ALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQH 315

Query: 175 MKWQAAI--KVDKKQIHLGTFGSQEEAAHLYDRAAFV---CGREPNFELSKEEKQEL 213
            +WQA I      K ++LGTF +QEEAA  YD AA          NF++S+ + + +
Sbjct: 316 GRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSI 372

[Close]

BLAST of Clc09G09030.2 vs. TAIR 10
Match: AT4G37750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.2e-04
Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 141 RRRNSHNQELSIMRGV--YFKNMKWQAAI--KVDKKQIHLGTFGSQEEAAHLYDRAA 194
           R+ +  ++  SI RGV  + ++ +WQA I      K ++LGTFG+QEEAA  YD AA
Sbjct: 374 RKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAA 430

The following BLAST results are available for this feature:

BLAST of Clc09G09030.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899853.1	1.9e-104	90.70	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Beni...	[more]
XP_038899850.1	1.9e-104	90.70	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Beni...	[more]
XP_004149780.1	1.7e-100	88.02	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu...	[more]
TYK11601.1	8.4e-100	87.10	ethylene-responsive transcription factor-like protein [Cucumis melo var. makuwa]	[more]
XP_008458053.1	1.4e-99	87.10	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 [Cucu...	[more]

BLAST of Clc09G09030.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XP9	1.8e-36	48.94	Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t...	[more]

BLAST of Clc09G09030.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8E3	8.2e-101	88.02	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G352440 PE=...	[more]
A0A5D3CIE2	4.0e-100	87.10	Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuw...	[more]
A0A1S3C6H0	6.9e-100	87.10	ethylene-responsive transcription factor-like protein At4g13040 OS=Cucumis melo ...	[more]
A0A5A7SPL9	1.0e-98	86.70	Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuw...	[more]
A0A6J1E2N6	9.7e-94	84.36	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Mo...	[more]

BLAST of Clc09G09030.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13040.1	1.3e-37	48.94	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.3	1.3e-37	48.94	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.2	1.7e-37	71.70	Integrase-type DNA-binding superfamily protein	[more]
AT5G57390.1	7.0e-04	30.77	AINTEGUMENTA-like 5	[more]
AT4G37750.1	9.2e-04	43.86	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 152..209 e-value: 9.9E-5 score: 27.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 154..194 e-value: 7.0E-7 score: 29.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 135..207 score: 9.440049
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 154..204 e-value: 1.3E-9 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..148
None	No IPR available	PANTHER	PTHR32467:SF4	OS02G0499000 PROTEIN	coord: 57..251
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 57..251
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 151..197

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc09G09030	Clc09G09030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7774491..7774890	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7774979..7775100	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7775730..7775910	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7776362..7776446	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7777339..7777469	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7777681..7777750	exon
Clc09G09030.2-exon	Clc09G09030.2-exon-ClcChr09:7778253..7778357	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc09G09030.2-three_prime_utr	Clc09G09030.2-three_prime_utr-ClcChr09:7774491..7774762	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7774763..7774890	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7774979..7775100	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7775730..7775910	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7776362..7776446	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7777339..7777469	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7777681..7777750	CDS
Clc09G09030.2-cds	Clc09G09030.2-cds-ClcChr09:7778253..7778357	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc09G09030.2	Clc09G09030.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0005094	Rho GDP-dissociation inhibitor activity