Clc08G14540.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc08G14540.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ornithine decarboxylase-like
Location	ClcChr08: 25480917 .. 25482522 (+)
Sequence length	1606
RNA-Seq Expression	Clc08G14540.1
Synteny	Clc08G14540.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTTCCCTCCTCTGTTTCAACTCCCTTCTTCCACCGGAGCCATGGCCGTCGACCAGCTCCTCGCCATTCCGGCAAACCCAAAGAAAAAGCTCCACCTCCTACAAAATGCACCCGGCCTAAACCCTAAAACCATCACTCCCATTTCTCAACATGGCCTCCTCCATTTCCTCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGGCGTCGCCGCCCTCTTCGACCACTGGTCTCAATCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCCAATCAGGCCATCCTCGCCGCCATGGCTGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGCCCTTGGAGTCTCCCCTGACCGAATCATCTTTGCCAATCCTTGCAAACCCGAGTCCCACATTGAATTCGCCGCCGCCGTCGGCGTTAACCTCACCACTTTTGATTCTGTCAACGAGATCGAGAAGATTCGACGCTGCCACCCAAAATCCGCTTTGTTGATTCGGATCAAACCATCCGACGACGGCAGGGCTCGGTGTCCATTGGGAAACAAGTACGGCGCGCTACCGGAAGAAATTTCCCCTCTTCTCGAAGCTGCTAAATCGGCTGAACTCCCCGTTGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATTGCTACTGCGAGAGGGGTTTTTAAAACGGCGGTCCGACTCGGCCTGCCACCAATGAATGTGCTCAATATCGGCGGCGGATTCACCGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCTCTGAAAGAGTATTTTCCGGCGGAACTGAATATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAACATCATCGGAAAACGAGTGCGGGGAGATTTAAGGGAGTATTGGATTAACGACGGGATTTATGGGTCAATGAACTGTATACTGTACGATCATGCGACGGTGGCTTGCAGACCGTTGGCACTGAAATCGAACCGGAAAAACCCAACGTGCGACGGAGGAAGAATGTACGACGCTACCGTTTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGATTGGCTGGTTTTTCCGAAGATGGGAGCTTACACGGCGGCAGCGGGATCCAACTTCAATGGGTTTGACACGGCGGCGATTGAAACTTATGTTGTGTACTCCGAAGAAGGAAACGGCACCGTATTGGGTTGAATCTTAATGTGGTAATATGTTTGGGTCAAAAGAAGGTTGTAGTTGTCGTTAATGTTAAGATTATATTGTTGTTAATTTTTCTCGTGGAAAAAAGAGAAAAATATTGATCTAACTATTTTCCCGGAGGTGAATTTGATATAGCTTTTTAAATGGTAGAAAATGGATTAAAGGGTCCCAACTATTATTTTAGTTTATGAACTTTCCTTGTTACCAATTTGTAATGATACAACAATTTATAACAATTTAGCCACTTAAATAAAATCTAAGTTTTAGTTTAA

mRNA sequence

CCTTCTTCCCTCCTCTGTTTCAACTCCCTTCTTCCACCGGAGCCATGGCCGTCGACCAGCTCCTCGCCATTCCGGCAAACCCAAAGAAAAAGCTCCACCTCCTACAAAATGCACCCGGCCTAAACCCTAAAACCATCACTCCCATTTCTCAACATGGCCTCCTCCATTTCCTCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGGCGTCGCCGCCCTCTTCGACCACTGGTCTCAATCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCCAATCAGGCCATCCTCGCCGCCATGGCTGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGCCCTTGGAGTCTCCCCTGACCGAATCATCTTTGCCAATCCTTGCAAACCCGAGTCCCACATTGAATTCGCCGCCGCCGTCGGCGTTAACCTCACCACTTTTGATTCTGTCAACGAGATCGAGAAGATTCGACGCTGCCACCCAAAATCCGCTTTGTTGATTCGGATCAAACCATCCGACGACGGCAGGGCTCGGTGTCCATTGGGAAACAAGTACGGCGCGCTACCGGAAGAAATTTCCCCTCTTCTCGAAGCTGCTAAATCGGCTGAACTCCCCGTTGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATTGCTACTGCGAGAGGGGTTTTTAAAACGGCGGTCCGACTCGGCCTGCCACCAATGAATGTGCTCAATATCGGCGGCGGATTCACCGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCTCTGAAAGAGTATTTTCCGGCGGAACTGAATATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAACATCATCGGAAAACGAGTGCGGGGAGATTTAAGGGAGTATTGGATTAACGACGGGATTTATGGGTCAATGAACTGTATACTGTACGATCATGCGACGGTGGCTTGCAGACCGTTGGCACTGAAATCGAACCGGAAAAACCCAACGTGCGACGGAGGAAGAATGTACGACGCTACCGTTTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGATTGGCTGGTTTTTCCGAAGATGGGAGCTTACACGGCGGCAGCGGGATCCAACTTCAATGGGTTTGACACGGCGGCGATTGAAACTTATGTTGTGTACTCCGAAGAAGGAAACGGCACCGTATTGGGTTGAATCTTAATGTGGTAATATGTTTGGGTCAAAAGAAGGTTGTAGTTGTCGTTAATGTTAAGATTATATTGTTGTTAATTTTTCTCGTGGAAAAAAGAGAAAAATATTGATCTAACTATTTTCCCGGAGGTGAATTTGATATAGCTTTTTAAATGGTAGAAAATGGATTAAAGGGTCCCAACTATTATTTTAGTTTATGAACTTTCCTTGTTACCAATTTGTAATGATACAACAATTTATAACAATTTAGCCACTTAAATAAAATCTAAGTTTTAGTTTAA

Coding sequence (CDS)

ATGGCCGTCGACCAGCTCCTCGCCATTCCGGCAAACCCAAAGAAAAAGCTCCACCTCCTACAAAATGCACCCGGCCTAAACCCTAAAACCATCACTCCCATTTCTCAACATGGCCTCCTCCATTTCCTCCAATCCATTGCTCTCAAAAGTCCCGACGAACCCTTCTACATCTTCGACTTGGCCGGCGTCGCCGCCCTCTTCGACCACTGGTCTCAATCCCTTCCCACCGTCCGCCCTTTCTACGCCGTCAAATGCAACCCCAATCAGGCCATCCTCGCCGCCATGGCTGCCCTCGGCTCCAATTTCGACTGCGCCAGTCGGGCCGAAATCCAATCTGTTTTAGCCCTTGGAGTCTCCCCTGACCGAATCATCTTTGCCAATCCTTGCAAACCCGAGTCCCACATTGAATTCGCCGCCGCCGTCGGCGTTAACCTCACCACTTTTGATTCTGTCAACGAGATCGAGAAGATTCGACGCTGCCACCCAAAATCCGCTTTGTTGATTCGGATCAAACCATCCGACGACGGCAGGGCTCGGTGTCCATTGGGAAACAAGTACGGCGCGCTACCGGAAGAAATTTCCCCTCTTCTCGAAGCTGCTAAATCGGCTGAACTCCCCGTTGTTGGCGTGTCATTTCACATTGGAAGTGGGGCTACTGAAACAGGGGCTTATTCGGCCGCCATTGCTACTGCGAGAGGGGTTTTTAAAACGGCGGTCCGACTCGGCCTGCCACCAATGAATGTGCTCAATATCGGCGGCGGATTCACCGCCGGACCCCAATTCGAAGAAGCGGCTGTGACAGTAAATTCGGCTCTGAAAGAGTATTTTCCGGCGGAACTGAATATCACCCTCATGGCTGAACCGGGGCGGTTTTTTGCGGAATCGGCGTTCACTCTGGCCGTCAACATCATCGGAAAACGAGTGCGGGGAGATTTAAGGGAGTATTGGATTAACGACGGGATTTATGGGTCAATGAACTGTATACTGTACGATCATGCGACGGTGGCTTGCAGACCGTTGGCACTGAAATCGAACCGGAAAAACCCAACGTGCGACGGAGGAAGAATGTACGACGCTACCGTTTTCGGCCCCACGTGCGACGCTTTGGACACTGTTTTGACCGGACAGCAGCTGCCGGAGTTGGAGGTGGGAGATTGGCTGGTTTTTCCGAAGATGGGAGCTTACACGGCGGCAGCGGGATCCAACTTCAATGGGTTTGACACGGCGGCGATTGAAACTTATGTTGTGTACTCCGAAGAAGGAAACGGCACCGTATTGGGTTGA

Protein sequence

MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEEGNGTVLG

Homology

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BLAST of Clc08G14540.1 vs. NCBI nr
Match: XP_038885888.1 (ornithine decarboxylase-like [Benincasa hispida])

HSP 1 Score: 815.5 bits (2105), Expect = 2.2e-232
Identity = 397/426 (93.19%), Postives = 414/426 (97.18%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDL 60
           MAVDQLLA PANPKKKLHLLQNAPGLNPK+ITPISQHGLLHFLQS ALKSP+EPFY+FDL
Sbjct: 1   MAVDQLLAAPANPKKKLHLLQNAPGLNPKSITPISQHGLLHFLQSNALKSPNEPFYVFDL 60

Query: 61  AGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSP 120
           A VA LFDHWSQSLPTVRPFYAVKCNPN A+LAAMAALGSNFDCASRAEIQSVLALGVSP
Sbjct: 61  AVVATLFDHWSQSLPTVRPFYAVKCNPNPALLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARC 180
           DR++FANPCKPESHIEFAAAVGVNLTTFDSV+EIEKIRRCHPKSALLIRIKPSDDG ARC
Sbjct: 121 DRVVFANPCKPESHIEFAAAVGVNLTTFDSVDEIEKIRRCHPKSALLIRIKPSDDGGARC 180

Query: 181 PLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVR 240
           PLGNKYGALPEEI PLLEAAKSAELPVVGVSFHIGSGATETGAYSAAI+ ARGVF+TAVR
Sbjct: 181 PLGNKYGALPEEIIPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAISAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELN+TLMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNVTLMAEPGRFFAESAFTLA 300

Query: 301 VNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDAT 360
           V+IIGKRVRGDLREYWINDGIYGSMNCILYDHATV CRPLA+KSN KNPTC GGRMY++T
Sbjct: 301 VSIIGKRVRGDLREYWINDGIYGSMNCILYDHATVTCRPLAMKSNWKNPTCGGGRMYEST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEE 420
           VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGF+TAAIETY+VYSE+
Sbjct: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGTVL 427
           GNG VL
Sbjct: 421 GNGAVL 426

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BLAST of Clc08G14540.1 vs. NCBI nr
Match: KAA0064856.1 (ornithine decarboxylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 770.8 bits (1989), Expect = 6.3e-219
Identity = 377/425 (88.71%), Postives = 398/425 (93.65%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKLHLLQNAPGLNPKTITPISQHGLLHFLQSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSP 120
           A VA LFD WS SLPTVRPFYAVKCNPN   LAAMAALGSNFDCASRAEIQSVLALGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARC 180
           DRI+FANPCKPESHIEFAA VGVNLTTFDSV+EI+KIRRCHPKSALLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVR 240
           PLGNKYGALPEEI PLL+AAKSAEL VVGVSFHIGSGATET AYSAAIA ARGVF+TAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA+KEYFP +LNI LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDAT 360
           V+IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTC GGRM+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEE 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGF+TAAIETY+VYSE+
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGTV 426
           GNG V
Sbjct: 421 GNGAV 425

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BLAST of Clc08G14540.1 vs. NCBI nr
Match: XP_008445311.1 (PREDICTED: ornithine decarboxylase-like [Cucumis melo])

HSP 1 Score: 769.6 bits (1986), Expect = 1.4e-218
Identity = 376/425 (88.47%), Postives = 398/425 (93.65%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKLHLLQNAPGLNPKTITPISQHGLLHFLQSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSP 120
           A VA LFD WS SLPTVRPFYAVKCNPN   LAAMAALGSNFDCASRAEIQSVLALGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARC 180
           DRI+FANPCKPESHIEFAA VGVNLTTFDSV+EI+KIRRCHPKSALLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVR 240
           PLGNKYGALPEEI PLL+AAKSAEL VVGVSFHIGSGATET AYSAAIA ARGVF+TAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA+KEYFP +LNI LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDAT 360
           V+IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTC GGRM+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEE 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGF+TA+IETY+VYSE+
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTASIETYIVYSEQ 420

Query: 421 GNGTV 426
           GNG V
Sbjct: 421 GNGAV 425

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BLAST of Clc08G14540.1 vs. NCBI nr
Match: XP_023538083.1 (ornithine decarboxylase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 708.4 bits (1827), Expect = 3.8e-200
Identity = 346/411 (84.18%), Postives = 376/411 (91.48%), Query Frame = 0


Query: 19  LLQNAPGLNPKTITPISQHGLLHFLQSIALKS--PDEPFYIFDLAGVAALFDHWSQSLPT 78
           LLQ A GL+PK+ITPI QHGLLHFLQSIAL S  P+EPFYIFDLA + AL   W+QSLPT
Sbjct: 7   LLQTALGLSPKSITPIPQHGLLHFLQSIALSSDNPNEPFYIFDLATITALMSLWTQSLPT 66

Query: 79  VRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIE 138
           VRPFYAVKCNPN A+LAAMAALGSNFDCAS +EIQ+VLALGVSPDRI+FANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAAMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPL 198
           FAAAVGVNLTTFDSV EIEKIR CHPKSALL+RIKP +DG ARC LG KYGALP+EI PL
Sbjct: 127 FAAAVGVNLTTFDSVYEIEKIRSCHPKSALLLRIKPPEDGGARCQLGQKYGALPDEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ET AYS+AIA ARGVF TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETEAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYW 318
           AGPQFE+AAVT+NSALKEYFPAELNIT+MAEPGR+FAESAFTLAVN+IGKRVRGD REYW
Sbjct: 247 AGPQFEKAAVTINSALKEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATV+C PLALKSNRKNPTC G +MY +TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVSCTPLALKSNRKNPTCGGMKMYGSTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEEGNGTVLG 428
           QLP+LEVGDWLV+PKMGAYTAAAGSNFNGF+TAAIETY+VYS++GNG VLG
Sbjct: 367 QLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSDQGNGAVLG 417

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BLAST of Clc08G14540.1 vs. NCBI nr
Match: KAG6585519.1 (hypothetical protein SDJN03_18252, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 704.9 bits (1818), Expect = 4.2e-199
Identity = 343/411 (83.45%), Postives = 375/411 (91.24%), Query Frame = 0


Query: 19  LLQNAPGLNPKTITPISQHGLLHFLQSIALKS--PDEPFYIFDLAGVAALFDHWSQSLPT 78
           LLQ A GL+PK++TPI QHGLL FLQS+AL S  P+EPFYIFDLA + AL   W+QSLPT
Sbjct: 7   LLQTALGLSPKSVTPIPQHGLLPFLQSLALSSDNPNEPFYIFDLATITALMSLWTQSLPT 66

Query: 79  VRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIE 138
           VRPFYAVKCNPN A+LAAMAALGSNFDCAS +EIQ+VLALGVSPDRI+FANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAAMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPL 198
           FAAAVGVNLTTFDSV EIEKIR CHPK+ALL+RIKP +DG ARC LG KYGALP+EI PL
Sbjct: 127 FAAAVGVNLTTFDSVYEIEKIRSCHPKTALLLRIKPPEDGGARCQLGQKYGALPDEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AIA ARGVF TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSALKEYFPAELNIT+MAEPGR+FAESAFTLAVN+IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALKEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATV+C PLALKSNRKNPTC G +MY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVSCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEEGNGTVLG 428
           QLP+LEVGDWLV+PKMGAYTAAAGSNFNGF+TAAIETY+VYSE+GNG VLG
Sbjct: 367 QLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVLG 417

[Close]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot
Match: P50134 (Ornithine decarboxylase OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 3.5e-148
Identity = 249/393 (63.36%), Postives = 305/393 (77.61%), Query Frame = 0


Query: 29  KTITPISQHGLLHFLQSI---ALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPFYAVKC 88
           + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L D W+  LP +RPFYAVKC
Sbjct: 36  RKVVPLSRDALQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVKC 95

Query: 89  NPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNL 148
           NP  + L+ ++A+GSNFDCASRAEI+ VL+LG+SPDRI+FANPCKPES I FAA VGVNL
Sbjct: 96  NPEPSFLSMLSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNL 155

Query: 149 TTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAKSAEL 208
           TTFDS +E+ KIR+ HPK  LL+RIKP DDG ARCP+G KYGALPEE+ PLL  A++A L
Sbjct: 156 TTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNARCPMGPKYGALPEEVEPLLRTAQAARL 215

Query: 209 PVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFTAGPQFEEAA 268
            V GVSFHIGSG  ++ AY  AIA A+GVF+TA R G+  M VL+IGGGFT+G QF  A+
Sbjct: 216 TVSGVSFHIGSGDADSKAYLGAIAAAKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTAS 275

Query: 269 VTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGIYGSM 328
             V SAL+++F  E  +T++AEPGRFFAE+AFTLA  IIGKRVRG+LREYWINDG+YGSM
Sbjct: 276 AAVRSALEQHFHDEQELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSM 335

Query: 329 NCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVGD 388
           NC+LYDHATV   PLA  SNR N  C G + + +TVFGPTCDALDTVL   QLPEL+V D
Sbjct: 336 NCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVND 395

Query: 389 WLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYS 419
           WL+FP MGAYT AAGSNFNGF+T+AI T++ Y+
Sbjct: 396 WLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 428

[Close]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot
Match: Q8S3N2 (Ornithine decarboxylase OS=Capsicum annuum OX=4072 GN=ODC PE=2 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.1e-144
Identity = 244/397 (61.46%), Postives = 305/397 (76.83%), Query Frame = 0


Query: 25  GLNPKTITPISQHGLLHFLQSI---ALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPFY 84
           G   + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L D W+ +LP VRPFY
Sbjct: 36  GDTTRKVVPLSKDALQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFY 95

Query: 85  AVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAV 144
           AVKCNP  + L+ +AA+GSNF CASRAEI+ VL+LG+SP+RI+FANPCKPES I FA  V
Sbjct: 96  AVKCNPEPSFLSMLAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 155

Query: 145 GVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAK 204
           GVNLTT+DS +E+ KI++ HPK  LL+RIKP +DG ARCP+G KYGALPEEI PLL  A+
Sbjct: 156 GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKYGALPEEIEPLLRIAQ 215

Query: 205 SAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFTAGPQF 264
           ++ L V GVSFHIGSG  ++ AY  AIA A+ VF+TA + G+  MNVL+IGGGFT+G QF
Sbjct: 216 ASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGHQF 275

Query: 265 EEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGI 324
             AA  V SAL+++F  E  +T++AEPGRFFAE+AFTLA  IIGKRVRGDLREYWINDG+
Sbjct: 276 TTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGL 335

Query: 325 YGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPEL 384
           YGSMNC+LYDHATV   PLA  SNR N  C G +M+ +T+FGPTCDALDTVL    +PEL
Sbjct: 336 YGSMNCVLYDHATVTATPLACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYHVPEL 395

Query: 385 EVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYS 419
           +V DW++FP MGAYT AAGSNFNGF+T+AI T++ Y+
Sbjct: 396 QVNDWVIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 432

[Close]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot
Match: O22616 (Ornithine decarboxylase OS=Solanum lycopersicum OX=4081 GN=ODC PE=2 SV=2)

HSP 1 Score: 513.1 bits (1320), Expect = 3.1e-144
Identity = 243/393 (61.83%), Postives = 302/393 (76.84%), Query Frame = 0


Query: 29  KTITPISQHGLLHFLQSI---ALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPFYAVKC 88
           + + P+S+  L  F+ SI    L+   +PFY+ DL  V +L + W+ +LP +RPFYAVKC
Sbjct: 36  RKVVPLSKDALQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVKC 95

Query: 89  NPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNL 148
           NP  + L+ ++A+GSNFDCASRAEI+ VL+ G+SPDRI+FANPCKPES I FA  +GVNL
Sbjct: 96  NPEPSFLSMLSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVNL 155

Query: 149 TTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAKSAEL 208
           TT+DS +E+ KIR+ HPK  LL+RIKP  DG ARCP+G KYGALPEEI PLL  A++A L
Sbjct: 156 TTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGALPEEIEPLLRTAQAARL 215

Query: 209 PVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFTAGPQFEEAA 268
            V GVSFHIGSG  ++ AY  AIA A+ VF+TA +LG+P M VL+IGGGFT+G QF  AA
Sbjct: 216 TVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAA 275

Query: 269 VTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGIYGSM 328
             V SAL+ +F     +T++AEPGRFFAE+AFTLA  IIGKRVRG+L+EYWINDG+YGSM
Sbjct: 276 PAVKSALETHFHDFPELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGLYGSM 335

Query: 329 NCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVGD 388
           NC+LYDHATV   PLA  SNR N  C G + + +TVFGPTCDALDTVL   QLPEL+V D
Sbjct: 336 NCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVND 395

Query: 389 WLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYS 419
           WL+FP MGAYT AAGSNFNGF+T+AI T++ Y+
Sbjct: 396 WLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYA 428

[Close]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot
Match: P07805 (Ornithine decarboxylase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 8.5e-94
Identity = 178/393 (45.29%), Postives = 254/393 (64.63%), Query Frame = 0


Query: 44  QSIALKSPDE--PFYIFDLAGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSN 103
           + I++ + DE  PF++ DL  +    + W + LP V PFYAVKCN +  +L  +AALG+ 
Sbjct: 25  KKISMNTCDEGDPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTG 84

Query: 104 FDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCH 163
           FDCAS  EIQ V  +GV P++II+ANPCK  SHI +A   GV++ TFD V+E+EK+ + H
Sbjct: 85  FDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTH 144

Query: 164 PKSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATET 223
           PK+ +++RI  +DD  ARC L  K+GA  E+   +LE AK   + V GVSFH+GSG+T+ 
Sbjct: 145 PKAKMVLRIS-TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDA 204

Query: 224 GAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGF----TAGPQFEEAAVTVNSALKEYFP 283
             ++ AI+ +R VF     LG   M++L+IGGGF     A  +FEE A  +N+AL+++FP
Sbjct: 205 STFAQAISDSRFVFDMGTELGF-NMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFP 264

Query: 284 AELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLRE--------------YWINDGIYG 343
            +L +T++AEPGR++  SAFTLAVN+I K+V   ++               Y++NDG+YG
Sbjct: 265 PDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYG 324

Query: 344 SMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEV 403
           S NCILYDHA V  RPL  +    N      ++Y ++V+GPTCD LD ++    LPE++V
Sbjct: 325 SFNCILYDHAVV--RPLPQREPIPNE-----KLYPSSVWGPTCDGLDQIVERYYLPEMQV 384

Query: 404 GDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVV 417
           G+WL+F  MGAYT    S+FNGF +  I  YVV
Sbjct: 385 GEWLLFEDMGAYTVVGTSSFNGFQSPTI-YYVV 407

[Close]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot
Match: P27118 (Ornithine decarboxylase (Fragment) OS=Gallus gallus OX=9031 GN=ODC1 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-90
Identity = 177/387 (45.74%), Postives = 241/387 (62.27%), Query Frame = 0


Query: 43  LQSIALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNF 102
           +  ++     + FY+ DL  +      W ++LP V PFYAVKCN ++A++  +A LG+ F
Sbjct: 18  INEVSSSDDKDAFYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGF 77

Query: 103 DCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHP 162
           DCAS+ EIQ V ++GV P+RII+ANPCK  S I+ AA  GV + TFDS  E+ KI R HP
Sbjct: 78  DCASKTEIQLVQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHP 137

Query: 163 KSALLIRIKPSDDGRARCPLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETG 222
           K+ LL+RI  +DD +A C L  K+GA  +    LLE AK  +L +VGVSFH+GSG T+  
Sbjct: 138 KAKLLLRI-TTDDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPE 197

Query: 223 AYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFTAGP----QFEEAAVTVNSALKEYFPA 282
            +  AI+ AR VF     LG   M +L+IGGGF        +FEE    +N AL +YFP 
Sbjct: 198 TFVQAISDARCVFDMGAELGF-NMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPL 257

Query: 283 ELNITLMAEPGRFFAESAFTLAVNIIGKRV----------RGDLRE----YWINDGIYGS 342
           +  +T++AEPGR++  SAFTLAVNII K++            D+ +    Y++NDG+YGS
Sbjct: 258 DSEVTIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGS 317

Query: 343 MNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVG 402
            NCILYDHA V  +P+     +K P  D G  Y  +++GPTCD LD ++    +PEL+VG
Sbjct: 318 FNCILYDHAHV--KPVL----QKRPKPDDG-CYSCSIWGPTCDGLDRIVERCNMPELQVG 377

Query: 403 DWLVFPKMGAYTAAAGSNFNGFDTAAI 412
           DW++F  MGAYT AA S FNGF    I
Sbjct: 378 DWILFENMGAYTVAAASTFNGFQRPTI 395

[Close]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL
Match: A0A5A7VEV5 (Ornithine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001690 PE=3 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 3.0e-219
Identity = 377/425 (88.71%), Postives = 398/425 (93.65%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKLHLLQNAPGLNPKTITPISQHGLLHFLQSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSP 120
           A VA LFD WS SLPTVRPFYAVKCNPN   LAAMAALGSNFDCASRAEIQSVLALGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARC 180
           DRI+FANPCKPESHIEFAA VGVNLTTFDSV+EI+KIRRCHPKSALLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVR 240
           PLGNKYGALPEEI PLL+AAKSAEL VVGVSFHIGSGATET AYSAAIA ARGVF+TAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA+KEYFP +LNI LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDAT 360
           V+IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTC GGRM+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEE 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGF+TAAIETY+VYSE+
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQ 420

Query: 421 GNGTV 426
           GNG V
Sbjct: 421 GNGAV 425

[Close]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL
Match: A0A1S3BD90 (ornithine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC103488379 PE=3 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 6.8e-219
Identity = 376/425 (88.47%), Postives = 398/425 (93.65%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKSPDEPFYIFDL 60
           MAVDQLL +PAN KKKLHLLQNAPGLNPKTITPISQHGLLHFLQSI LK+ D+PFY FDL
Sbjct: 1   MAVDQLLPVPANSKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIVLKTSDKPFYTFDL 60

Query: 61  AGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSP 120
           A VA LFD WS SLPTVRPFYAVKCNPN   LAAMAALGSNFDCASRAEIQSVLALGVSP
Sbjct: 61  AVVATLFDLWSHSLPTVRPFYAVKCNPNPDFLAAMAALGSNFDCASRAEIQSVLALGVSP 120

Query: 121 DRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARC 180
           DRI+FANPCKPESHIEFAA VGVNLTTFDSV+EI+KIRRCHPKSALLIRIKPSDDG ARC
Sbjct: 121 DRIVFANPCKPESHIEFAATVGVNLTTFDSVDEIQKIRRCHPKSALLIRIKPSDDGSARC 180

Query: 181 PLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVR 240
           PLGNKYGALPEEI PLL+AAKSAEL VVGVSFHIGSGATET AYSAAIA ARGVF+TAVR
Sbjct: 181 PLGNKYGALPEEIIPLLQAAKSAELAVVGVSFHIGSGATETRAYSAAIAAARGVFETAVR 240

Query: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLA 300
           LGLPPMNVLNIGGGFTAGPQFEEAAV V SA+KEYFP +LNI LMAEPGRFFAESAFTLA
Sbjct: 241 LGLPPMNVLNIGGGFTAGPQFEEAAVAVKSAIKEYFPEDLNIALMAEPGRFFAESAFTLA 300

Query: 301 VNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDAT 360
           V+IIGKRVRGDLREYWINDGIYGSMNCILYDHAT++CR LA+KSN +NPTC GGRM+ +T
Sbjct: 301 VHIIGKRVRGDLREYWINDGIYGSMNCILYDHATLSCRALAVKSNMENPTCGGGRMHRST 360

Query: 361 VFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEE 420
           VFGPTCDALDTVLTG+QLPELEVGDWLVFPKMGAYTAAAGSNFNGF+TA+IETY+VYSE+
Sbjct: 361 VFGPTCDALDTVLTGKQLPELEVGDWLVFPKMGAYTAAAGSNFNGFNTASIETYIVYSEQ 420

Query: 421 GNGTV 426
           GNG V
Sbjct: 421 GNGAV 425

[Close]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL
Match: A0A6J1KTC4 (ornithine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111496226 PE=3 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.7e-199
Identity = 344/411 (83.70%), Postives = 373/411 (90.75%), Query Frame = 0


Query: 19  LLQNAPGLNPKTITPISQHGLLHFLQSIALKS--PDEPFYIFDLAGVAALFDHWSQSLPT 78
           LLQ APGL+PK+ITPI QHGLL FLQSIAL S  P+EPFYIFDLA + AL + W+QSLPT
Sbjct: 7   LLQTAPGLSPKSITPIPQHGLLPFLQSIALSSDNPNEPFYIFDLATITALMNLWTQSLPT 66

Query: 79  VRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIE 138
           VRPFYAVKCNPN A+LA MAALGSNFDCAS +EIQ+VLALGVSPDRI+FANPCKPESHI+
Sbjct: 67  VRPFYAVKCNPNPALLAVMAALGSNFDCASTSEIQAVLALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPL 198
           FAA VGVNLTTFDSV EIEKIR CHPKSALL+RIKP +DG ARC LG KYGALPEEI PL
Sbjct: 127 FAADVGVNLTTFDSVYEIEKIRSCHPKSALLLRIKPPEDGGARCQLGQKYGALPEEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AIA ARGVF TAVRL LPPMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALPPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSAL+EYFPAELNIT+MAEPGR+FAESAFTLAVN+IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALQEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATV C PLALKSNRKNPTC G +MY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVTCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEEGNGTVLG 428
            LP+LEVGDWLV+PKMGAYTAAAGSNFNGF+TAAIETY+VYSE+GNG VLG
Sbjct: 367 PLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVLG 417

[Close]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL
Match: A0A6J1GI92 (ornithine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111454396 PE=3 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.5e-197
Identity = 340/411 (82.73%), Postives = 372/411 (90.51%), Query Frame = 0


Query: 19  LLQNAPGLNPKTITPISQHGLLHFLQSIALKS--PDEPFYIFDLAGVAALFDHWSQSLPT 78
           LLQ A GL+PK++TPI QHGLL FLQS+AL S  P+EPFYIFDLA + AL + W+QSLP 
Sbjct: 7   LLQTALGLSPKSVTPIPQHGLLPFLQSLALSSDNPNEPFYIFDLATITALMNLWTQSLPA 66

Query: 79  VRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIE 138
           V PFYAVKCNPN A+LAAMAALGSNFDCAS +EIQ++LALGVSPDRI+FANPCKPESHI+
Sbjct: 67  VHPFYAVKCNPNPALLAAMAALGSNFDCASTSEIQAILALGVSPDRIVFANPCKPESHIK 126

Query: 139 FAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRARCPLGNKYGALPEEISPL 198
           FAAAVGVNLTTFDSV EIEKIR CHPK+ALL+RIKP +DG ARC LG KYGALPEEI PL
Sbjct: 127 FAAAVGVNLTTFDSVYEIEKIRSCHPKTALLLRIKPPEDGGARCQLGQKYGALPEEIIPL 186

Query: 199 LEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGGFT 258
           LEAAK+A+L VVGVSFHIGSG  ETGAYS+AIA ARGVF TAVRL L PMNVLNIGGGFT
Sbjct: 187 LEAAKAADLAVVGVSFHIGSGDAETGAYSSAIAAARGVFDTAVRLALSPMNVLNIGGGFT 246

Query: 259 AGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYW 318
           AGPQFE+AA+T+NSALKEYFPAELNIT+MAEPGR+FAESAFTLAVN+IGKRVRGD REYW
Sbjct: 247 AGPQFEKAALTINSALKEYFPAELNITVMAEPGRYFAESAFTLAVNVIGKRVRGDHREYW 306

Query: 319 INDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQ 378
           INDGIYGSMNCILYDHATV C PLALKSNRKNPTC G +MY  TVFGPTCD LDTVLTG 
Sbjct: 307 INDGIYGSMNCILYDHATVTCTPLALKSNRKNPTCGGMKMYGTTVFGPTCDGLDTVLTGY 366

Query: 379 QLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYSEEGNGTVLG 428
           QLP+LEVGDWLV+PKMGAYTAAAGSNFNGF+TAAIETY+VYSE+GNG VLG
Sbjct: 367 QLPDLEVGDWLVWPKMGAYTAAAGSNFNGFNTAAIETYIVYSEQGNGAVLG 417

[Close]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL
Match: A0A6J1CQX6 (ornithine decarboxylase-like OS=Momordica charantia OX=3673 GN=LOC111013933 PE=3 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.1e-189
Identity = 328/421 (77.91%), Postives = 363/421 (86.22%), Query Frame = 0


Query: 1   MAVDQLLAIPANPKKKLHLLQNAPGLNPKTITPISQHGLLHFLQSIALKS--PDEPFYIF 60
           MAVD LL   A   KKLHLLQ APGL  K IT IS+ G++ FLQSIAL +   D+PFY+F
Sbjct: 1   MAVDHLLRAIAADPKKLHLLQIAPGLRGKAITTISEDGMIQFLQSIALNNQHSDDPFYVF 60

Query: 61  DLAGVAALFDHWSQSLPTVRPFYAVKCNPNQAILAAMAALGSNFDCASRAEIQSVLALGV 120
           DLA +  L D W++SLP VRPFYAVKCNP+ A+L AMAALGSNFDCASR EI++VLA GV
Sbjct: 61  DLAVLVGLMDRWTRSLPAVRPFYAVKCNPDPALLGAMAALGSNFDCASRXEIEAVLAFGV 120

Query: 121 SPDRIIFANPCKPESHIEFAAAVGVNLTTFDSVNEIEKIRRCHPKSALLIRIKPSDDGRA 180
           SPDRI+FANPCK ESHI+FAA+VGVNLTTFDS+ E+EKIRRCHPKSALLIRIK  DDG A
Sbjct: 121 SPDRIVFANPCKAESHIKFAASVGVNLTTFDSIEEVEKIRRCHPKSALLIRIKSPDDGGA 180

Query: 181 RCPLGNKYGALPEEISPLLEAAKSAELPVVGVSFHIGSGATETGAYSAAIATARGVFKTA 240
           RCPLG KYGALPEEI+PLL+AAK A+L V GVSFHIGSGATE GAY AAIA ARGVF TA
Sbjct: 181 RCPLGPKYGALPEEITPLLQAAKDADLAVAGVSFHIGSGATEAGAYRAAIAAARGVFDTA 240

Query: 241 VRLGLPPMNVLNIGGGFTAGPQFEEAAVTVNSALKEYFPAELNITLMAEPGRFFAESAFT 300
           V+LGLPPMNVLNIGGGFTAGPQFEEAA TV SA+ +YFPAE+  T MAEPGRFFAESAFT
Sbjct: 241 VQLGLPPMNVLNIGGGFTAGPQFEEAAATVKSAMGKYFPAEVKFTAMAEPGRFFAESAFT 300

Query: 301 LAVNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVACRPLALKSNRKNPTCDGGRMYD 360
           LA NIIGKRVRG++REYWINDGIYGSMNC+LYDHATV C P+A KS+RKNPTC G R Y 
Sbjct: 301 LAANIIGKRVRGEVREYWINDGIYGSMNCLLYDHATVTCTPMACKSSRKNPTCGGARKYG 360

Query: 361 ATVFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYTAAAGSNFNGFDTAAIETYVVYS 420
           ATVFGPTCDALDTVLTG QLPELEVGDWLVFP MGAYTAAAGS+FNGF TAAI+TY+V+S
Sbjct: 361 ATVFGPTCDALDTVLTGHQLPELEVGDWLVFPNMGAYTAAAGSSFNGFSTAAIKTYLVHS 420

[Close]

BLAST of Clc08G14540.1 vs. TAIR 10
Match: AT5G11880.1 (Pyridoxal-dependent decarboxylase family protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-20
Identity = 99/379 (26.12%), Postives = 155/379 (40.90%), Query Frame = 0


Query: 43  LQSIALKSPDEPFYIFDLAGVAALFDHWSQSLPTVRPF--YAVKCNPNQAILAAMAALGS 102
           +Q I       PFY++    +    + + ++L  VR    YA+K N N  IL  + +LG 
Sbjct: 87  VQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGC 146

Query: 103 NFDCASRAEIQSVLALGVSPDRIIFANPCKPESHIEFAAAVGVNL---TTFDSVNEIEKI 162
                S  E++  L  G  P + IF    K    +  AA  GV +   + FD  N +E  
Sbjct: 147 GAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEAS 206

Query: 163 RRCHPKSALLIRIKPSDDGRAR--CPLGN---KYGALPEEISPLLEAAKS--AELPVVGV 222
           R    +  +L+RI P  D +       GN   K+G   E++   L+  K+   EL +VG 
Sbjct: 207 RISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGA 266

Query: 223 SFHIGSGATETGAYSAAIATARGVFKTAVRLGLPPMNVLNIGGG-----FTAGPQFEEAA 282
             H+GS  T+   +  A            R G   ++ LNIGGG     + AG       
Sbjct: 267 HCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGF-EVSYLNIGGGLGIDYYHAGAVLPTPM 326

Query: 283 VTVNSALKEYFPAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGIYGSM 342
             +N+  +     +LN  L+ EPGR    +      ++ G +  G      I+  +   +
Sbjct: 327 DLINTVRELVLSRDLN--LIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELI 386

Query: 343 NCILYDHATVACRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVGD 402
              LYD    A + + L S    PT     +    V GP C++ D +   ++LP    G 
Sbjct: 387 RPSLYD----AYQHIELVS----PTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 446

Query: 403 WLVFPKMGAYTAAAGSNFN 405
            LV    GAY  +  S +N
Sbjct: 447 GLVVHDAGAYCMSMASTYN 454

[Close]

BLAST of Clc08G14540.1 vs. TAIR 10
Match: AT3G14390.1 (Pyridoxal-dependent decarboxylase family protein )

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-18
Identity = 95/368 (25.82%), Postives = 150/368 (40.76%), Query Frame = 0


Query: 54  PFYIFDLAGVAALFDHWSQSLPTVRPF--YAVKCNPNQAILAAMAALGSNFDCASRAEIQ 113
           PFY++    +    + + ++L  V     YA+K N N  IL  + +LG      S  E++
Sbjct: 93  PFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 152

Query: 114 SVLALGVSPDRIIFANPCKPESHIEFAAAVGVNL---TTFDSVNEIEKIRRCHPKSALLI 173
             L  G  P + IF    K    +  AA  GV +   + FD  N +E  R    +  +L+
Sbjct: 153 LALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 212

Query: 174 RIKPSDDGRAR--CPLGN---KYGALPEEISPLLEAAKS--AELPVVGVSFHIGSGATET 233
           RI P  D +       GN   K+G   E++   L+  K+   EL +VG   H+GS  T+ 
Sbjct: 213 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 272

Query: 234 GAYSAAIATARGVFKTAVRLGLPPMNVLNIGGG-----FTAGPQFEEAAVTVNSALKEYF 293
             +  A            R G   ++ LNIGGG     + AG         +N+  +   
Sbjct: 273 DIFRDAAVLMIEYIDEIRRQGF-EVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVL 332

Query: 294 PAELNITLMAEPGRFFAESAFTLAVNIIGKRVRGDLREYWINDGIYGSMNCILYDHATVA 353
             +LN  L+ EPGR    +      ++ G +  G      I+  +   +   LYD    A
Sbjct: 333 SRDLN--LIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYD----A 392

Query: 354 CRPLALKSNRKNPTCDGGRMYDATVFGPTCDALDTVLTGQQLPELEVGDWLVFPKMGAYT 405
            + + L S    P      +    V GP C++ D +   ++LP    G  LV    GAY 
Sbjct: 393 YQHIELVS----PPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYC 449

The following BLAST results are available for this feature:

BLAST of Clc08G14540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885888.1	2.2e-232	93.19	ornithine decarboxylase-like [Benincasa hispida]	[more]
KAA0064856.1	6.3e-219	88.71	ornithine decarboxylase-like [Cucumis melo var. makuwa]	[more]
XP_008445311.1	1.4e-218	88.47	PREDICTED: ornithine decarboxylase-like [Cucumis melo]	[more]
XP_023538083.1	3.8e-200	84.18	ornithine decarboxylase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585519.1	4.2e-199	83.45	hypothetical protein SDJN03_18252, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc08G14540.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50134	3.5e-148	63.36	Ornithine decarboxylase OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
Q8S3N2	1.1e-144	61.46	Ornithine decarboxylase OS=Capsicum annuum OX=4072 GN=ODC PE=2 SV=1	[more]
O22616	3.1e-144	61.83	Ornithine decarboxylase OS=Solanum lycopersicum OX=4081 GN=ODC PE=2 SV=2	[more]
P07805	8.5e-94	45.29	Ornithine decarboxylase OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2	[more]
P27118	1.2e-90	45.74	Ornithine decarboxylase (Fragment) OS=Gallus gallus OX=9031 GN=ODC1 PE=2 SV=1	[more]

BLAST of Clc08G14540.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEV5	3.0e-219	88.71	Ornithine decarboxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BD90	6.8e-219	88.47	ornithine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC103488379 PE=3 SV=1	[more]
A0A6J1KTC4	2.7e-199	83.70	ornithine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111496226 PE=3 SV...	[more]
A0A6J1GI92	1.5e-197	82.73	ornithine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111454396 PE=3 ...	[more]
A0A6J1CQX6	1.1e-189	77.91	ornithine decarboxylase-like OS=Momordica charantia OX=3673 GN=LOC111013933 PE=3...	[more]

BLAST of Clc08G14540.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11880.1	2.2e-20	26.12	Pyridoxal-dependent decarboxylase family protein	[more]
AT3G14390.1	2.1e-18	25.82	Pyridoxal-dependent decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002433	Ornithine decarboxylase	PRINTS	PR01182	ORNDCRBXLASE	coord: 319..332 score: 71.67 coord: 79..106 score: 60.6 coord: 53..77 score: 31.47 coord: 360..370 score: 69.39 coord: 380..393 score: 59.76 coord: 123..147 score: 56.67 coord: 153..175 score: 43.91
IPR002433	Ornithine decarboxylase	PANTHER	PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	coord: 31..419
IPR000183	Ornithine/DAP/Arg decarboxylase	PRINTS	PR01179	ODADCRBXLASE	coord: 81..99 score: 44.57 coord: 204..217 score: 53.57 coord: 393..406 score: 57.14 coord: 101..113 score: 45.31 coord: 284..303 score: 44.22
IPR029066	PLP-binding barrel	GENE3D	3.20.20.10	Alanine racemase	coord: 63..292 e-value: 2.5E-132 score: 443.2
IPR029066	PLP-binding barrel	SUPERFAMILY	51419	PLP-binding barrel	coord: 53..296
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	GENE3D	2.40.37.10	Lyase, Ornithine Decarboxylase; Chain A, domain 1	coord: 52..413 e-value: 2.5E-132 score: 443.2
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	SUPERFAMILY	50621	Alanine racemase C-terminal domain-like	coord: 273..412
IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal	PFAM	PF02784	Orn_Arg_deC_N	coord: 63..293 e-value: 3.5E-70 score: 236.2
IPR022643	Orn/DAP/Arg decarboxylase 2, C-terminal	PFAM	PF00278	Orn_DAP_Arg_deC	coord: 294..393 e-value: 1.5E-18 score: 67.2
None	No IPR available	PANTHER	PTHR11482:SF61	ORNITHINE DECARBOXYLASE-LIKE	coord: 31..419
None	No IPR available	CDD	cd00622	PLPDE_III_ODC	coord: 52..414 e-value: 1.39727E-179 score: 503.18
IPR022657	Orn/DAP/Arg decarboxylase 2, conserved site	PROSITE	PS00879	ODR_DC_2_2	coord: 242..256
IPR022653	Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site	PROSITE	PS00878	ODR_DC_2_1	coord: 81..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc08G14540	Clc08G14540	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G14540.1-exon	Clc08G14540.1-exon-ClcChr08:25480917..25482522	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G14540.1-five_prime_utr	Clc08G14540.1-five_prime_utr-ClcChr08:25480917..25480960	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G14540.1-cds	Clc08G14540.1-cds-ClcChr08:25480961..25482244	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G14540.1-three_prime_utr	Clc08G14540.1-three_prime_utr-ClcChr08:25482245..25482522	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc08G14540.1	Clc08G14540.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006596	polyamine biosynthetic process
biological_process	GO:0033387	putrescine biosynthetic process from ornithine
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004586	ornithine decarboxylase activity