Clc08G09480.2 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc08G09480.2
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	outer envelope pore protein 21, chloroplastic
Location	ClcChr08: 20856525 .. 20861937 (-)
Sequence length	1146
RNA-Seq Expression	Clc08G09480.2
Synteny	Clc08G09480.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTTCTCTTAGATACGGTGGAGACTCCAGAGCCTTGAGAATCCACGCCAAAGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACACCATTTCCTTCTCCAACATTCGCAATTAGCCCTTGTTTTCTTTTTCATTTCCCATCGTTGATTCTCGCTGTCTTGTTACCGCCCAAAATATAATCACTGTCATGCCTCTTATCTGCTTATATTTATGCTCCGGTATCACATCGATTTGGGAACCGTGTCTTGGAGGATGATTCTTTTTTGTGCTGATTTAGAAGAATAATAGATTTAACAGACCTTCACAGAGTTACATTTTGCTTTTCCTCTTCCTCGCTTAAAGGTTCATGGCGAGCTAGATACAAGAATTGGAGAACCGAGTCTACTCGCTGCTTCCGTGAGACAATTTTATCCGGATGTAAGGTTTTCTTGGTAACCAATTCACTTGGTGTAAGTCTCTGTGTTTCTATATATTATTGTTATTCAAATGCAGCTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAGATGTCTTTTCCTGTGACAACTGATGGTTTGTTGAAATTTAGTATTAAAGGGCAATCTCATTTTGATAAGGATTTTAAGCAGGTTAGTGATGACTAATTGTATCTCAGGACACAGAAAACAAAATTGTGAACTTGATATTTTCTTTTGTTTTCCTTTGCAACTAACTTTGTTCAATTGTTTTCTTGGCAGACTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAGCAAGATGTAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGGTAGAGTTAATCTACCCTTTTCTGTTTTTTAGTGGTCAGTTCAAGTCATGTGTCTCATCTTACAGAAAATTGCTATATTTTCTTTCCATACTAGATATTATTTGATTGTCCCTATGTTATCTCATGATTTGTTATCTTGTAGACCTCGTCTAAGAAAGAAAAAGTCAGAACAATTTAAAAATTAAAAAAGCAGCTCAGAAGCTCTCTTTGCATAGTTGGTAGTGAACCTAGGAATCAAGCGTTGGCTTCTGGGGCCTTAAGGCAAGGGACCCTCTGTCTCCTCTTTCTTTTTCCACTTTGGCTGTTGATTGGGCTTAGATGGCTGTTGGACAGGGGCATGGCTTCCAATTTGATTAAAGACAGAATCAAGTATTCTGGGAGGCATCATGTTCATATAAAAACTTACAAAAATGGCACAAATTTTTTTAGCATGAGCAATAAAAAGAAAGTTGAGGACTGTCTCAAACTTAATACCTATTAAGTATGTTACCATGAAGCTCTTTCATACTACAGGAAGTTACCCACTTTAACCTTAGCCATTCCCTGGCGCATATGAACAAAGCTGAAATTTGGAGCTGGAGAAGATATTTAACCAACTCACCCTCTGAACTTCAAAGATTGTAGATTTGACCGTTGCTTGAGTTGTCCTTTTCAGTGAATCCTTCAATATATATATATTATTCAAAATATCTTGCCGACTGACTACTATTATTGAGCATCACATTTGAGACTTTCTTGTGGATCGTTGAATAAAGCAAATGTTTTTCATCTGGTCAATAAGAAGACAGTCGCTTACTAGATGCAAAGCTCTGTCTTTACATTATAAAAAGCAAAGTTTTAAAAGGCTAAAGGCAGTTTTTAGACAGGGGAGAAAGGGTTTTAGGGTGTGGAGGCCTAATCCTTTGAAGGGAGCCTCGTGTAACTCCTTTTTATTTGTAGGCTTATTGATCCTTCTTCCTTAGGTGAGTCGATTTCATCTGCTCTTTGGAGGATTAAGATCCCTAGGAAAGTTCAGTTCTTTACGTGGTAAGTTTTACATGGAAAAGTTAACACTATGGATCGCCTTGTGAGGAAGATACCCTGTTAGTTGGTTTGTTTTTGCTATACTATTGTTGGAAGGCTGAGGAAGCTTGGATCACATTTTTTTGAGATGTGAGTTCCCGAGAGCCATGTGGAGTGACTTCTTTTAGACTTTTGGTTTCTCGCTAGCTTGCCAAGGGAGAATTGTTATATGATTGGGGAATTCCTTCACCAACCACCCTTTCATGAGAAGGGTCGTTTTTGATATTGAATGTGGCATATTTGGACTTCTTTCTTTTCCACTCTGCGACCTTAATCATGCATTTAATTCTTCCAACCTTTACTAAACGGCTAAAAGCATCTGCCACCATAGTGAAAAGTAGGATAGGGGATCTCCTTACCAAATCCCTCTAGTAGCCTTATTTTCCCCTTGGTCTCCCATTAATCATATTGGAGAAATTTGAGTTGGATAGGCAACCCCTATGCCAAGAACTCCATCTTCTCAAAAAGCACTTCACAGTGTTCAACTCTAGAATATAACCAAGAAAAACTCAATCCACCTTATCATATTTCTTCTCGAAGTCAATCTTTAGAATGTACCCTGTTGGCCTGTTTTAGCTTTGATTAAATAGTCAGCACTCAACATTTTGATTTAACAGGACTTCAGTTGGGAGTTCTTGTGATGAAAATCAAAATCTTGTTAAAGGTTGTGAAATGAAATCCTATATGAACCCATACTGATTTGCTTGTTAGGGTTTTTTGCCTTTTAAGATGGTCAATATTGAATGAAGACGGAACGTGTGCAGTTCAAGTCCTATGTTTTGCCGGAGGTTTCTATTTTGTGGAACAGATTGGTAGAGATGTTTCATTTTAACCTCCCTCTTTATAGTTTGCTAAAAGTTATGGATTTTCTTGGGAAGGTTTTGATTTCCGCTTCAAGGGACAAGGATACAAACAAATAGTTTAGAATGGTTTTGGGAGGCTCCTTTGAGCAGTTTGGATTGGGTGAAATACAAGAATTCTTCATGAGGTTGATTACCTCGCTGGAGTTCGACTCAGTTTTATTAACTCGCTACAAAGCTCACTCCATTCCCAAGGATTGCCTGACGAAGGATGACTGCAAATGATGTTAGAGAAGAAGAGATTGAGAAATGGAGGAGAGGGGAAAAGAAAAATAATATTTTGAAAATGCCACAAACTAAAATTTAATATAAAATAAATAAAATCCGTTTAAATGTGCCACCTCAACCATGCCACATCATATTTTTAATAGTCAACTAATGGTCACACAAGCTTAGGAACTACCAAACTTTCAGGGACATAAAGTATCCATTTTGAAACCTCAGCCTCATTTTGGAGTTTACTTCCAAAAGAATTTTAACCAATGGGTATGTTCTTTAATCTCATTTGACTTCAGCAATCCCCACCTTTCTAGTTTAAGCCAGTGGTGTTATATCTCATTCCTGACATGATTATTAAGCAATTACTGGTCCGTTTTGCATTGTGGTATATTGAAACTTCACTTTATTTCACCACTTTCATACAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCAGACATCAATGGTAGATGGAATGTGAGATTCGACCTGTGAGAAACAGAAGTTGAAGTTTCTCCTTCACGAATAGTAGTTTCAGCTGCGGGATTCCTTTCTGAGATATGTATTTACCTTCATATCCGTTGTTTCTATTCTGATTAGCATTGTCTCAACAATTTTCTGATGAATTGATACATCTTGCAAATCCTTTATAATAATTATTTTTATCACTTAATTTTATGCAAGTTTCATGCGACTCTTATGTAGGCATGCGACTAAACTACTTCACTACCACGGCAAATTAGGCAGGTTAATAGACACTTTAGTAATGGGGTTGCATTTCCTTTACTGCACGTTTGGATCGTGAATATTATTTCATATGTATAAGTATTAAATATATGGGATAATTAATGTATGTGTTTGAATATGCGAAATAGTTAAGGTTTGAAAGTTAAATATTTGTGTTTTGATTTACCAATTTTATATATATAGAAGCTAAAATTAATTATTACTTACAAATAGTCATAAATTAAATTTATCATTATTTAATAATTATTATATCAATTCGTTATTTAATCACTTGAAATAAAAAGGGTGGTTTGCAAATATAGGAAAATAAAATAAAATATTTACAAATATAATAAAATTCTACTGTATTTGTAAAAAAAATTCTACTGTCGATAGACTACTATGTCTATCATAGACACAAATAGTAGTCTATCGCGATGTATTGTTGTGATATTTTGTTATTATTTGTAATTATTTTTAACAGTTGTCATTTTAAATAATTTTTCAAATAAAAATGAATATCTGTAACTATTTAATTGAATTACTAAAAATAATTAAATTAATTTAAATTAATTAGAATATTAATAATTAATAACAAAACTTTATACTAAATAGATAACATAATGTATTAGTTTGAAATTAAAGTGTATAATATATTTATTATTTAATTAAAATTAATAGGAAAGATGAATTGATATTAATTTATTAATTAGTTAGATCTTCATCTCTAAGGTCTAAAAATTTTACGCATAAGGAGAGCATTAGAAAACCATGTCAGATTAACGAGGTTCAAAAGGTGAAATCTTGTTAAATAAGCACAGATATTAAATGTACCCTTAAATCTTATATGTGTGTAATATATATTTATATATTATAGTCAGGGAGTTAAAAATTATGATGCCAGACTGCCGTTTTATTAGCCACAACTGTTGTTCACCGGTGAGGCATCTATAATACAAAATATATTTACTCCAACTTATGTTAAAATGAAAATCAAATCAAGCCTTGAAAAATTAAGAGGAAAGAAAACAAGCTTATAAGAATCTAAACCAATCACAATCTCCAATACATTGGTGGCATACAAAGTACATCAACTTAAACCAAAAATTCAAAATGGGAAAAGAATTTGGGCTTACTGTGTTCTTCCTGTTCATCCTTTCTTAATGCAGCAAGGAGCAGATATGCTTCCAATCTGGGAAGCAACAGATGAAGTGTTTCTGTAGGGAGTCAAGACTGCCAATTTGCATCATTCTCAACTCAATTATTAGTACCTTTTGCAGCAGCTTGTCTCGCACCGACAGAGAAGAATTCCGCAATGACCTCGAGGGGCATGCCTTTGGTTTCTGGTACTTTCAAGTAGACAAAAATCCATGAAATTATACACACAACGGCATAAATGCCGAAGACACCAGCGAGACCTATTGCACTAAGCATCACGGGCAGAGAATAGGTAACAATTATATCACCGATCCAGAAAACCATTGCACATATCGCAATGCAGAGGCCACGGACCCTTGTCGGGAAAATTTCCGAGCAAAGGATGTTTGGGATTGGTCCATATGCCATGACAAAGATGCAAAAGTAAACAACCACACAAATGGTCGAGATTGCTGCATTGACGATGGTGCTCACTGTAACAAGCTCGAACACAACGAGAATGAGGAGTGA

mRNA sequence

ATGGATACTTCTCTTAGATACGGTGGAGACTCCAGAGCCTTGAGAATCCACGCCAAAGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACACCATTTCCTTCTCCAACATTCGCAATTAGCCCTTACCTTCACAGAGTTACATTTTGCTTTTCCTCTTCCTCGCTTAAAGGTTCATGGCGAGCTAGATACAAGAATTGGAGAACCGAGTCTACTCGCTGCTTCCGTGAGACAATTTTATCCGGATCTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAGATGTCTTTTCCTGTGACAACTGATGGTTTGTTGAAATTTAGTATTAAAGGGCAATCTCATTTTGATAAGGATTTTAAGCAGACTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAGCAAGATGTAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGACGGAACGTGTGCAGTTCAAGTCCTATGTTTTGCCGGAGGTTTCTATTTTGTGGAACAGATTGGTAGAGATGTTTCATTTTAACCTCCCTCTTTATAGTTTGCTAAAAGTTATGGATTTTCTTGGGAAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCAGACATCAATGGTAGATGGAATGTGAGATTCGACCTCAAGGAGCAGATATGCTTCCAATCTGGGAAGCAACAGATGAAGTGTTTCTGTAGGGAGTCAAGACTGCCAATTTGCATCATTCTCAACTCAATTATTAGTACCTTTTGCAGCAGCTTGTCTCGCACCGACAGAGAAGAATTCCGCAATGACCTCGAGGGGCATGCCTTTGGTTTCTGCGAGACCTATTGCACTAAGCATCACGGGCAGAGAATAGGTAACAATTATATCACCGATCCAGAAAACCATTGCACATATCGCAATGCAGAGGCCACGGACCCTTGTCGGGAAAATTTCCGAGCAAAGGATGTTTGGGATTGGTCCATATGCCATGACAAAGATGCAAAAGTAAACAACCACACAAATGGTCGAGATTGCTGCATTGACGATGGTGCTCACTGTAACAAGCTCGAACACAACGAGAATGAGGAGTGA

Coding sequence (CDS)

ATGGATACTTCTCTTAGATACGGTGGAGACTCCAGAGCCTTGAGAATCCACGCCAAAGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACACCATTTCCTTCTCCAACATTCGCAATTAGCCCTTACCTTCACAGAGTTACATTTTGCTTTTCCTCTTCCTCGCTTAAAGGTTCATGGCGAGCTAGATACAAGAATTGGAGAACCGAGTCTACTCGCTGCTTCCGTGAGACAATTTTATCCGGATCTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAGATGTCTTTTCCTGTGACAACTGATGGTTTGTTGAAATTTAGTATTAAAGGGCAATCTCATTTTGATAAGGATTTTAAGCAGACTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAGCAAGATGTAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGACGGAACGTGTGCAGTTCAAGTCCTATGTTTTGCCGGAGGTTTCTATTTTGTGGAACAGATTGGTAGAGATGTTTCATTTTAACCTCCCTCTTTATAGTTTGCTAAAAGTTATGGATTTTCTTGGGAAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCAGACATCAATGGTAGATGGAATGTGAGATTCGACCTCAAGGAGCAGATATGCTTCCAATCTGGGAAGCAACAGATGAAGTGTTTCTGTAGGGAGTCAAGACTGCCAATTTGCATCATTCTCAACTCAATTATTAGTACCTTTTGCAGCAGCTTGTCTCGCACCGACAGAGAAGAATTCCGCAATGACCTCGAGGGGCATGCCTTTGGTTTCTGCGAGACCTATTGCACTAAGCATCACGGGCAGAGAATAGGTAACAATTATATCACCGATCCAGAAAACCATTGCACATATCGCAATGCAGAGGCCACGGACCCTTGTCGGGAAAATTTCCGAGCAAAGGATGTTTGGGATTGGTCCATATGCCATGACAAAGATGCAAAAGTAAACAACCACACAAATGGTCGAGATTGCTGCATTGACGATGGTGCTCACTGTAACAAGCTCGAACACAACGAGAATGAGGAGTGA

Protein sequence

MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKVHGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLKFSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLPEVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDLKEQICFQSGKQQMKCFCRESRLPICIILNSIISTFCSSLSRTDREEFRNDLEGHAFGFCETYCTKHHGQRIGNNYITDPENHCTYRNAEATDPCRENFRAKDVWDWSICHDKDAKVNNHTNGRDCCIDDGAHCNKLEHNENEE

Homology

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BLAST of Clc08G09480.2 vs. NCBI nr
Match: XP_004144247.1 (outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypothetical protein Csa_019071 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 7.9e-72
Identity = 152/238 (63.87%), Postives = 158/238 (66.39%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           MDTS RY  DSRALRIHAKEKI LDSN+FLQ                            V
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
            GELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHY+ RGKMSFPVTTDGLL+
Sbjct: 61  RGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQ KYKGAAEFSLGVLNFQREQDVRVKVGYEVFE             
Sbjct: 121 FTIKGQSHLDKDFKQFKYKGAAEFSLGVLNFQREQDVRVKVGYEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPY+QIRENNWTLNADINGRWNVR D+
Sbjct: 181 ------------------------------KIPYIQIRENNWTLNADINGRWNVRLDI 167

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BLAST of Clc08G09480.2 vs. NCBI nr
Match: XP_008464824.1 (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 7.9e-72
Identity = 155/238 (65.13%), Postives = 158/238 (66.39%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           MDTS RY GDSRALRIHAKEKI LDSNIFLQ                            V
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
            GELDTRIGEPSLLAASVRQF  DLSASAGLGVQYDKYKKLHY+ RGKMSFPVTTDGLL+
Sbjct: 61  RGELDTRIGEPSLLAASVRQFNQDLSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQ KYKGAAEFSLGVLNFQREQDVRVKVGYEVFE             
Sbjct: 121 FTIKGQSHLDKDFKQIKYKGAAEFSLGVLNFQREQDVRVKVGYEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPYVQIRENNWTLNADINGRWNVRFDL
Sbjct: 181 ------------------------------KIPYVQIRENNWTLNADINGRWNVRFDL 167

[Close]

BLAST of Clc08G09480.2 vs. NCBI nr
Match: XP_038884931.1 (outer envelope pore protein 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 8.7e-71
Identity = 152/237 (64.14%), Postives = 158/237 (66.67%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           MDTS RYGGDSRALRIHAKEKI LDSNIFL+                            V
Sbjct: 1   MDTSFRYGGDSRALRIHAKEKISLDSNIFLE----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDTRIGEPSLLAASVRQFYPDLSASA LGVQYDKYKKLHYLARGKMSFPVTT+  LK
Sbjct: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAALGVQYDKYKKLHYLARGKMSFPVTTNDSLK 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKG+S+ DKDFKQTKYKGAAEF L VLNFQ+EQDVRVKVGYEVFE             
Sbjct: 121 FTIKGRSYLDKDFKQTKYKGAAEFCLDVLNFQKEQDVRVKVGYEVFE------------- 166

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFD 238
                                         KIPYVQIRENNWTLNADINGRWNVRFD
Sbjct: 181 ------------------------------KIPYVQIRENNWTLNADINGRWNVRFD 166

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BLAST of Clc08G09480.2 vs. NCBI nr
Match: KAG7020729.1 (Outer envelope pore protein 21, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 4.8e-69
Identity = 146/239 (61.09%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQV---HHFLLQHSQLALTFTELHFAFPLPR 60
           M+TSLR GGDSRALRIHAKEKIPLDSNIFLQV      +       L  T++HF      
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQVILWSALMFVEFSNTLVLTDIHFP----- 60

Query: 61  LKVHGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDG 120
            KVHGELDTR+GEPSLLAASVRQF+PDL ASAG+GVQYDKY+KL + ARGKMSFPVTTDG
Sbjct: 61  -KVHGELDTRMGEPSLLAASVRQFFPDLFASAGIGVQYDKYRKLQHFARGKMSFPVTTDG 120

Query: 121 LLKFSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSY 180
           +L+F+IKGQSH DKDFKQT +KGAAEFSLGV N Q +QDVRVK+G+EVFE          
Sbjct: 121 MLQFTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGDQDVRVKLGFEVFE---------- 180

Query: 181 VLPEVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRF 237
                                            KIPY+QIRENNW+LNADINGRW+VRF
Sbjct: 181 ---------------------------------KIPYLQIRENNWSLNADINGRWSVRF 190

[Close]

BLAST of Clc08G09480.2 vs. NCBI nr
Match: XP_022153118.1 (outer envelope pore protein 21, chloroplastic [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 4.0e-68
Identity = 140/238 (58.82%), Postives = 161/238 (67.65%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLRY GD+RALRIHAKEKIPLDSNIFLQ                            V
Sbjct: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDTR+GEPSLLAAS+RQFYPDLSASA +GV+YDKY+KLHYL RGKMSFPVTTDGLL+
Sbjct: 61  HGELDTRVGEPSLLAASLRQFYPDLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQS+ DK+FK+TK+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +             
Sbjct: 121 FTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSD------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWTLNA++NGRWNVRFDL
Sbjct: 181 ------------------------------KVPYLQIRENNWTLNANVNGRWNVRFDL 167

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BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot
Match: Q9SM57 (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-45
Identity = 102/248 (41.13%), Postives = 130/248 (52.42%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLRYGGDS+AL+IHAKEK+ +D+N F Q                            V
Sbjct: 1   METSLRYGGDSKALKIHAKEKLRIDTNTFFQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKY----------KKLHYLARGKMS 120
            G LDT+ G+PS  +A +R FYP+ SA+ G+GV+YDK            KL Y    K +
Sbjct: 61  RGGLDTKTGQPSSGSALIRHFYPNFSATLGVGVRYDKQDSVGVRYAKNDKLRYTVLAKKT 120

Query: 121 FPVTTDGLLKFSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTE 180
           FPVT DGL+ F IKG    D+DFK+ K +G AEFS  V NFQ++QDVR+++GYE FE   
Sbjct: 121 FPVTNDGLVNFKIKGGCDVDQDFKEWKSRGGAEFSWNVFNFQKDQDVRLRIGYEAFE--- 177

Query: 181 RVQFKSYVLPEVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADING 239
                                                   ++PY+QIRENNWT NAD  G
Sbjct: 181 ----------------------------------------QVPYLQIRENNWTFNADYKG 177

[Close]

BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot
Match: Q6ID99 (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21A PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-41
Identity = 91/238 (38.24%), Postives = 125/238 (52.52%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLRY  +SR+L+IHAKEK P++S                              RL++
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSK----------------------------TRLQL 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDT  G PS   A +R F+ + S + G+G+ YDK +KL  L RGK  FPV TD ++ 
Sbjct: 61  HGELDTGAGVPSYFCAMIRYFFHEASTNLGVGLHYDKREKLRCLVRGKKKFPVITDEVVT 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKG+  FD+D  Q   KGAAEF   +  FQ++QD+R+++GYE+FE             
Sbjct: 121 FNIKGRCDFDQDLVQRNAKGAAEFDWNIWKFQKDQDLRLRIGYEMFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWT N ++ G+WNVR+DL
Sbjct: 181 ------------------------------KVPYMQIRENNWTFNTNLKGKWNVRYDL 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot
Match: Q9FPG2 (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21B PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-41
Identity = 89/238 (37.39%), Postives = 126/238 (52.94%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TS+RY  +S++++IHAKEK+P++S   LQ                            +
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQ----------------------------L 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDT  G PS   A +R F+P+ S   G+G+ YDK +KL  L RGK  FPV  D  + 
Sbjct: 61  HGELDTGTGAPSYFCAMIRHFFPEASTGLGVGLHYDKRQKLRCLVRGKKEFPVRADKRVT 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKG+   D+D  Q   KGAAEF+  +++F+ +QDVR+KVGYE+F+             
Sbjct: 121 FNIKGRCDIDQDLNQKNPKGAAEFAWNIMDFKEDQDVRIKVGYEMFD------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWTLNA++ G+WN+R+DL
Sbjct: 181 ------------------------------KVPYMQIRENNWTLNANMKGKWNLRYDL 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot
Match: B8AFI8 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP21 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-23
Identity = 82/258 (31.78%), Postives = 111/258 (43.02%), Query Frame = 0


Query: 1   MDTSLRY-GGDSR-------ALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFA 60
           M+TSLR  GG SR        LRIHAKEK+P+ SN  LQ                     
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQ--------------------- 60

Query: 61  FPLPRLKVHGELDTRIGEPSLLAASVRQFYPDLSASAGLG------------VQYDKYKK 120
                   HGE+    G P+ LA   R FYP LSA+ GLG            + +D +  
Sbjct: 61  -------AHGEIHAATGAPTYLALLFRNFYPRLSANLGLGLAIHFRNNQPLPLAWDNFS- 120

Query: 121 LHYLARGKMSFPVTTDGLLKFSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVK 180
            + L   K   P  ++ LL  ++KG+   DK F  T    A E +  +L+ +R QDVR+K
Sbjct: 121 -YTLRASKAIIPFPSNALLGINLKGRLLADKYFNPTTRTAAVELAWTILDLKRGQDVRLK 180

Query: 181 VGYEVFEKTERVQFKSYVLPEVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIREN 239
           +GY++                                           L K+PY Q+REN
Sbjct: 181 LGYQL-------------------------------------------LHKMPYFQLREN 185

[Close]

BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot
Match: Q6K965 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP21 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-23
Identity = 82/258 (31.78%), Postives = 111/258 (43.02%), Query Frame = 0


Query: 1   MDTSLRY-GGDSR-------ALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFA 60
           M+TSLR  GG SR        LRIHAKEK+P+ SN  LQ                     
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQ--------------------- 60

Query: 61  FPLPRLKVHGELDTRIGEPSLLAASVRQFYPDLSASAGLG------------VQYDKYKK 120
                   HGE+    G P+ LA   R FYP LSA+ GLG            + +D +  
Sbjct: 61  -------AHGEIHAATGAPTYLALLFRNFYPRLSANLGLGLAIHFRNNQPLPLAWDNFS- 120

Query: 121 LHYLARGKMSFPVTTDGLLKFSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVK 180
            + L   K   P  ++ LL  ++KG+   DK F  T    A E +  +L+ +R QDVR+K
Sbjct: 121 -YTLRASKAIIPFPSNALLGINLKGRLLADKYFNPTARTAAVELAWTILDLKRGQDVRLK 180

Query: 181 VGYEVFEKTERVQFKSYVLPEVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIREN 239
           +GY++                                           L K+PY Q+REN
Sbjct: 181 LGYQL-------------------------------------------LHKMPYFQLREN 185

[Close]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL
Match: A0A0A0KGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 3.8e-72
Identity = 152/238 (63.87%), Postives = 158/238 (66.39%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           MDTS RY  DSRALRIHAKEKI LDSN+FLQ                            V
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
            GELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHY+ RGKMSFPVTTDGLL+
Sbjct: 61  RGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQ KYKGAAEFSLGVLNFQREQDVRVKVGYEVFE             
Sbjct: 121 FTIKGQSHLDKDFKQFKYKGAAEFSLGVLNFQREQDVRVKVGYEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPY+QIRENNWTLNADINGRWNVR D+
Sbjct: 181 ------------------------------KIPYIQIRENNWTLNADINGRWNVRLDI 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL
Match: A0A1S3CMW4 (outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502611 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 3.8e-72
Identity = 155/238 (65.13%), Postives = 158/238 (66.39%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           MDTS RY GDSRALRIHAKEKI LDSNIFLQ                            V
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
            GELDTRIGEPSLLAASVRQF  DLSASAGLGVQYDKYKKLHY+ RGKMSFPVTTDGLL+
Sbjct: 61  RGELDTRIGEPSLLAASVRQFNQDLSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQ KYKGAAEFSLGVLNFQREQDVRVKVGYEVFE             
Sbjct: 121 FTIKGQSHLDKDFKQIKYKGAAEFSLGVLNFQREQDVRVKVGYEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPYVQIRENNWTLNADINGRWNVRFDL
Sbjct: 181 ------------------------------KIPYVQIRENNWTLNADINGRWNVRFDL 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL
Match: A0A6J1DGN6 (outer envelope pore protein 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020697 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 140/238 (58.82%), Postives = 161/238 (67.65%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLRY GD+RALRIHAKEKIPLDSNIFLQ                            V
Sbjct: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDTR+GEPSLLAAS+RQFYPDLSASA +GV+YDKY+KLHYL RGKMSFPVTTDGLL+
Sbjct: 61  HGELDTRVGEPSLLAASLRQFYPDLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGLLR 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQS+ DK+FK+TK+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +             
Sbjct: 121 FTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSD------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWTLNA++NGRWNVRFDL
Sbjct: 181 ------------------------------KVPYLQIRENNWTLNANVNGRWNVRFDL 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL
Match: A0A6J1KSM1 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496077 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-67
Identity = 144/238 (60.50%), Postives = 157/238 (65.97%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLR GGDSRALRIHAKEKIPLDSNIFLQ                            V
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDTR+GEPSLLAASVRQF+PDL ASAG+GVQYDKY+KL + ARGKMSFPVTTDG+L+
Sbjct: 61  HGELDTRMGEPSLLAASVRQFFPDLFASAGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQ 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQT +KGAAEFSLGV N Q EQDVRVKVG+EVFE             
Sbjct: 121 FTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGEQDVRVKVGFEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPY+QIRENNWTLNADINGRW+VRF L
Sbjct: 181 ------------------------------KIPYLQIRENNWTLNADINGRWSVRFIL 167

[Close]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL
Match: A0A6J1GHG8 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454002 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.1e-66
Identity = 141/238 (59.24%), Postives = 157/238 (65.97%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLR GGDSRALRIHAKEKIPLDSNIFLQ                            V
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ----------------------------V 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDTR+GEPSLLAASVRQF+PDL ASAG+GVQYDKY+KL + ARGKMSFPVTTDG+L+
Sbjct: 61  HGELDTRMGEPSLLAASVRQFFPDLFASAGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQ 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKGQSH DKDFKQT +KGAAEFSLGV N Q +QDVRVK+G+EVFE             
Sbjct: 121 FTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGDQDVRVKLGFEVFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         KIPY+QIRENNW+LNADINGRW+VRF L
Sbjct: 181 ------------------------------KIPYLQIRENNWSLNADINGRWSVRFIL 167

[Close]

BLAST of Clc08G09480.2 vs. TAIR 10
Match: AT1G20816.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-42
Identity = 91/238 (38.24%), Postives = 125/238 (52.52%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TSLRY  +SR+L+IHAKEK P++S                              RL++
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSK----------------------------TRLQL 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDT  G PS   A +R F+ + S + G+G+ YDK +KL  L RGK  FPV TD ++ 
Sbjct: 61  HGELDTGAGVPSYFCAMIRYFFHEASTNLGVGLHYDKREKLRCLVRGKKKFPVITDEVVT 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKG+  FD+D  Q   KGAAEF   +  FQ++QD+R+++GYE+FE             
Sbjct: 121 FNIKGRCDFDQDLVQRNAKGAAEFDWNIWKFQKDQDLRLRIGYEMFE------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWT N ++ G+WNVR+DL
Sbjct: 181 ------------------------------KVPYMQIRENNWTFNTNLKGKWNVRYDL 167

[Close]

BLAST of Clc08G09480.2 vs. TAIR 10
Match: AT1G76405.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-42
Identity = 89/238 (37.39%), Postives = 126/238 (52.94%), Query Frame = 0


Query: 1   MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
           M+TS+RY  +S++++IHAKEK+P++S   LQ                            +
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQ----------------------------L 60

Query: 61  HGELDTRIGEPSLLAASVRQFYPDLSASAGLGVQYDKYKKLHYLARGKMSFPVTTDGLLK 120
           HGELDT  G PS   A +R F+P+ S   G+G+ YDK +KL  L RGK  FPV  D  + 
Sbjct: 61  HGELDTGTGAPSYFCAMIRHFFPEASTGLGVGLHYDKRQKLRCLVRGKKEFPVRADKRVT 120

Query: 121 FSIKGQSHFDKDFKQTKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKTERVQFKSYVLP 180
           F+IKG+   D+D  Q   KGAAEF+  +++F+ +QDVR+KVGYE+F+             
Sbjct: 121 FNIKGRCDIDQDLNQKNPKGAAEFAWNIMDFKEDQDVRIKVGYEMFD------------- 167

Query: 181 EVSILWNRLVEMFHFNLPLYSLLKVMDFLGKIPYVQIRENNWTLNADINGRWNVRFDL 239
                                         K+PY+QIRENNWTLNA++ G+WN+R+DL
Sbjct: 181 ------------------------------KVPYMQIRENNWTLNANMKGKWNLRYDL 167

[Close]

BLAST of Clc08G09480.2 vs. TAIR 10
Match: AT1G76405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-08
Identity = 29/84 (34.52%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 1  MDTSLRYGGDSRALRIHAKEKIPLDSNIFLQVHHFLLQHSQLALTFTELHFAFPLPRLKV 60
          M+TS+RY  +S++++IHAKEK+P++S   LQ                            +
Sbjct: 1  METSMRYTSNSKSMKIHAKEKVPVNSKTHLQ----------------------------L 56

Query: 61 HGELDTRIGEPSLLAASVRQFYPD 85
          HGELDT  G PS   A +R F+P+
Sbjct: 61 HGELDTGTGAPSYFCAMIRHFFPE 56

The following BLAST results are available for this feature:

BLAST of Clc08G09480.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144247.1	7.9e-72	63.87	outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypo...	[more]
XP_008464824.1	7.9e-72	65.13	PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo]	[more]
XP_038884931.1	8.7e-71	64.14	outer envelope pore protein 21, chloroplastic [Benincasa hispida]	[more]
KAG7020729.1	4.8e-69	61.09	Outer envelope pore protein 21, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022153118.1	4.0e-68	58.82	outer envelope pore protein 21, chloroplastic [Momordica charantia]	[more]

BLAST of Clc08G09480.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SM57	2.9e-45	41.13	Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 ...	[more]
Q6ID99	2.0e-41	38.24	Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FPG2	2.0e-41	37.39	Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B8AFI8	1.1e-23	31.78	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=3...	[more]
Q6K965	1.1e-23	31.78	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Clc08G09480.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGQ0	3.8e-72	63.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=3 SV=1	[more]
A0A1S3CMW4	3.8e-72	65.13	outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1DGN6	2.0e-68	58.82	outer envelope pore protein 21, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KSM1	6.3e-67	60.50	outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1GHG8	9.1e-66	59.24	outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita mosch...	[more]

BLAST of Clc08G09480.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20816.1	1.4e-42	38.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76405.2	1.4e-42	37.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G76405.1	1.7e-08	34.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034575	Outer envelope pore protein 21	PANTHER	PTHR35993	OUTER ENVELOPE PORE PROTEIN 21B, CHLOROPLASTIC	coord: 1..238

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc08G09480	Clc08G09480	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20856525..20856780	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20856847..20857023	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20858428..20858507	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20859134..20859262	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20861074..20861172	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20861281..20861433	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20861509..20861628	exon
Clc08G09480.2-exon	Clc08G09480.2-exon-ClcChr08:20861806..20861937	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20856525..20856780	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20856847..20857023	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20858428..20858507	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20859134..20859262	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20861074..20861172	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20861281..20861433	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20861509..20861628	CDS
Clc08G09480.2-cds	Clc08G09480.2-cds-ClcChr08:20861806..20861937	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc08G09480.2	Clc08G09480.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044070	regulation of anion transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0008308	voltage-gated anion channel activity