Clc07G02770.1 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc07G02770.1
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr07: 2680357 .. 2682320 (-)
Sequence length387
RNA-Seq ExpressionClc07G02770.1
SyntenyClc07G02770.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCGACGATCGAGGCTGTGGATGGGAAAGGGCCAATGTCTTGTTCAATTCACTATTTTGCATTGAGGATTCCGATTCCGATTCAGAAGTATCGATCCCTTGATGCCTGGTTGGTGGCGGCAACCTTCAGAATCTGCACTTCATAGAAACTTAAATATGACTTGAGGTATGAGTTTTTATTACTCCGAAGAGTCAAATCGTCTCGTTTAATATTGCTTACGGATTTTAGCATTAGAGACTTGATGGCCATGGCAGTTAGCTGAATGGATATTGAGAAGTGTGCACTAAATTTTATGGGATTGAAGTTTATCGACATTCATATTTTTGTTTGAATATTGGTGACTGTCGCTGCTTATTACTGTATCGTTACCATTGGAATCCGAAAGGGAGTAACCGGTTCACTATACTCATACTCACAGCGAACCAAGAAATCTGTGGTTAGTTGAAGTTTTATCTAAATGAAGCTTATGTTACTAAACATTTGAAACTGTTTTGATTCTTGGAACTCTGATCTTTGATTGGTTGTTTACTACTTTCAGATAATATTTGTACTCATTTCTCATAATATGGGGGATTATATTCCTCAACTTCCCACCCCCTTCAACCCCCCAGTTCATTACTTAAAATGCAATGGTCGATTTCCTTAGGGGAGTTCGTTTTGTCATTGGTTGGACAAGTTTTTCCTTGGGGAATATCTCATCGAAGCACTAAAGAGTTTTGTGATAAGAAGCATCCATTTAGAGGTATGTCATCTGTCTAGTCTCTGGAGGTTTGTCATCTGTACCTTCTCCGATCGGTATAAGTTTTTCTGATTTGGTGTCTCATGCGTCTTGCTTCTCGGCATTTAATTCATTATGACAGAGAGTTCCCTTACAGGAAGTCATAGCTGTTTTCTTTATATATTCGTTGTAGAGGTGCTCAATTGATGGTTATCCTGCAATGCAATGTCTGAATGATAACCATACAAGAGCTGAGTTTTAGGAGTATATCATACTCATAGTTTCGATATTGTAGATGTAACTTAAAATTTCCGTTTGCTCCTACATTAATCGTTTACTGAGTCATTCATGCTTTCTGAAGTTGATTTTTTTCTGTGTTTGGATGAATCCATAGTCGTAAATAACCAGAATGCGTAAAATAAAACACCCTGTACTTCTGATTTATATCATTAGCTAAACAGTAAGATTTTTCTCCTCTCTTTATTTTGCGGAGCATCTATTTTCGGGTTGGAGCTTGCCTTTATTGATTCGTGTCACCTGTCTTTTGGAAGATGGACCATTTAACTGCTCCAGTGGACTGCTTAATCACAAATCTATAAAACAAGATGATACTGCACCAATGGTTCACAGTTTTGATCTCCAACTTTATCAGATCATACTTCGTAGATAGCAGCAATTATTGAATGGAAAAAATGGAAAAAAAAATCTGGCACGAATTCTGGTTCTTTTGAGGATCTTAAATTCGAAATTCTAATGAATATAAATCAACAAAAATAAGTATACATCACTCAAAGGTTGGTCCAGTAATGACAGTCGCATTAAAAATTACTGTACTTCTAGTAATAAAAAATGCTTTTAATACTTAGTCATATCATTACTAATTTAAATTTCATTCTATTTTGTAGTGTTGGGTCCTGTAATTTTTTTTACTCGGCCTTTTTATTAAACATTACTAGTTTAGCTAGAAAGTAGTGGTAGTAATGTAGAGGCATTGGATGCATCTATAAGAATATTTCCTACTCATGGACATGCTTTTGCCTGACTACTCTTGCTACTGTGGAGAGACGGTGTTGAGATGCACACAATAGATAGAGGAAACTGGCTTTCCTGCCGTCGATTACTCGATTTCTGAAAGAGTGATGGGGCAGTCATCTGTAAATTGGATCCTCATTCTTGAGCTGCTTCCGGTGGAGGATGAATACCTTTCCAGAGCAGCAACGTATCTGACGACACTGGAATAG

mRNA sequence

ATGGGAGCGACGATCGAGGCTGTGGATGGGAAAGGGCCAATGTCTTGTTCAATTCACTATTTTGCATTGAGGATTCCGATTCCGATTCAGAAGTATCGATCCCTTGATGCCTGCATTAGAGACTTGATGGCCATGGCAGGGAGTTCGTTTTGTCATTGGTTGGACAAGTTTTTCCTTGGGGAATATCTCATCGAAGCACTAAAGAGTTTTGTGATAAGAAGCATCCATTTAGAGATAGAGGAAACTGGCTTTCCTGCCGTCGATTACTCGATTTCTGAAAGAGTGATGGGGCAGTCATCTGTAAATTGGATCCTCATTCTTGAGCTGCTTCCGGTGGAGGATGAATACCTTTCCAGAGCAGCAACGTATCTGACGACACTGGAATAG

Coding sequence (CDS)

ATGGGAGCGACGATCGAGGCTGTGGATGGGAAAGGGCCAATGTCTTGTTCAATTCACTATTTTGCATTGAGGATTCCGATTCCGATTCAGAAGTATCGATCCCTTGATGCCTGCATTAGAGACTTGATGGCCATGGCAGGGAGTTCGTTTTGTCATTGGTTGGACAAGTTTTTCCTTGGGGAATATCTCATCGAAGCACTAAAGAGTTTTGTGATAAGAAGCATCCATTTAGAGATAGAGGAAACTGGCTTTCCTGCCGTCGATTACTCGATTTCTGAAAGAGTGATGGGGCAGTCATCTGTAAATTGGATCCTCATTCTTGAGCTGCTTCCGGTGGAGGATGAATACCTTTCCAGAGCAGCAACGTATCTGACGACACTGGAATAG

Protein sequence

MGATIEAVDGKGPMSCSIHYFALRIPIPIQKYRSLDACIRDLMAMAGSSFCHWLDKFFLGEYLIEALKSFVIRSIHLEIEETGFPAVDYSISERVMGQSSVNWILILELLPVEDEYLSRAATYLTTLE
Homology
The following BLAST results are available for this feature:
BLAST of Clc07G02770.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc07G02770.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc07G02770.1 vs.
Match NameE-valueIdentityDescription
BLAST of Clc07G02770.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc07G02770Clc07G02770gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc07G02770.1-exonClc07G02770.1-exon-ClcChr07:2680357..2680509exon
Clc07G02770.1-exonClc07G02770.1-exon-ClcChr07:2681574..2681669exon
Clc07G02770.1-exonClc07G02770.1-exon-ClcChr07:2682063..2682087exon
Clc07G02770.1-exonClc07G02770.1-exon-ClcChr07:2682208..2682320exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc07G02770.1-cdsClc07G02770.1-cds-ClcChr07:2680357..2680509CDS
Clc07G02770.1-cdsClc07G02770.1-cds-ClcChr07:2681574..2681669CDS
Clc07G02770.1-cdsClc07G02770.1-cds-ClcChr07:2682063..2682087CDS
Clc07G02770.1-cdsClc07G02770.1-cds-ClcChr07:2682208..2682320CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc07G02770.1Clc07G02770.1-proteinpolypeptide