Clc05G22070.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc05G22070.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein TIC 22, chloroplastic
Location	ClcChr05: 30441027 .. 30445459 (+)
Sequence length	2156
RNA-Seq Expression	Clc05G22070.1
Synteny	Clc05G22070.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGTTTCTCGTGGCCATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGTACCAGACTCGCAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGCCGGAGGCTAATTGGCGATCATTTCCTACCCCACCTTTCGCGTCCCTTGCCCAGCACACTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCAAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCAATTGGGTTGCTGTGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTTTGTCTTGCCCCTGTTTTCTTTTCCCCATCTGTGAATAGTGAAATGATCGTGAAGAAGTGAGGAAGACTTGTCCCAAATCAAATTTGTGTTTCTTTTTTATTTAGTGGAATTTGTGTTTAATGATTTGGAAATTTTATGCATTTGAAGTAAGTTTACCATTCTAATTCTTTTGTTGAAATATGATGTTGTATCCATAATTCTTGAGAATTCTGAGGTTTAATATTGCAATATGATATCTGTTATAGTGAATTTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTACCAATTACGCTTGACCAGGTACCTTGCTTGCATCATCAAATTTTTACTTCTTGAGTACTAAACTTTTCCCCTTCTGTAGTTATTTTGTTTTTAACCCTTAATATTCAACCGTGTAGTGGAATTCGTAGTGAAGGTTAGTGTGGGTGGTAGGCAACTACATTTGTAGGTTTGTACTAGTACTCCTGATCAATGGTATGAGACAATGAGAGGAACATTTACCCGATGAGATAACTCAGTTTTATTTTTAGTCATCTTGCTGGTGAAAGTTTCATCTTTGACACCTATTAATTTGAACGTTTCTTAATGTGTTGGGAAGGGAGATTTCATATAAATAGACAAACAGGTTGAAGTTTTAAAACACGGAATTTGAATTTGATGTGAGAAGAGAAGTGTTTATTTTACTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTTTCCTTTTATAGGGGGGGTGGAGGGCGGGGTCTGAAATGCAATATTTTTGTGAGAAAGAATTCATTGAGAATTCAATTTGATTTTTCTTTTTCCCATGTATTGTGTATTGTCAATTACCAGGTTTTCCTCCTTCAGTTTCAGTCTTACTTCTGTACTTCAGTAGATTTATTTGTAGTTTTTGTTCATTTGTAATGATTCACAGGTATATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCGTTAGAGGCAAGTTTCATTTGATCTTGTCATTCTCTTGGCCCTCAGACAAAGGCTTGTGTCAATACTATGCTATATTTTATATTCTTTCTTTCAGTATCTAAATTTTAAATTTTGTAGAAATACCAATACTTGTAAGAGATGCTAGGTAGATATTAGCTAGATGCCAACTACAATAGGTTAGCCTAGTGGTCGAGGGGAGAGTTGAAAAAAGGTAAAATGATTATGGAGCTATCAGTTCAAATCTCGTGGTTGTCACATACGGGAAATATTATGATTGGTAGTTCTTTTTTTTTTTTTTTACCACCAAACCAAATTGTGTAAGCTTGATATTCTCACTATTAAAGTGTGGCACTAATTATATGTATATTATCTAGTTGGATACCTGCTGGGTTGAACGTGCTCATGACTATCTTGAAAGATAGCTTGACATTTCAATTTGATATTTGAGATGTTACCTTCATTTGATTTGTAACAAAATATTTACAAACAGTATCAAAAACATTGGGAACATGCTGTATTTCTGTTGACTTGAAAGTTGACTCGTAATTTTATCTTTTTACTTGTAGCTTAAAGCTTCGGATACCAGAAGCAGTTTTGACGGAGTTCCTGTTTTTCAGGTACGTTAGTGCACTTAGTTAAATGGTTTTAACACAAACTTAAATGAAAAAAGTCAGCATTGTGAAAACTCTAAAATGACCCATAAATTGGACACTTCCTAAATTCCTAATGCAGAGCACAAACAGCTCTCAATCATGATTGTCGGTGTGCATAATTCATAATACATGGTTATAGTTGGGTTGACAGTTTCCGTAATTGTATCTCTATCTCTGTGTATTGTTTGGTTGGCATGTTCCGTCCTATATGCTGTTCATTTCACATAATAACAATTCTCTTTTTCTTTTTACAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGTCTGTATGCATATAATTTCTGAGGAACTATGGATCGTAGATGCATCTAACCATTTACTGGAAATATAGGAAGATATAGAAAAGGAACTGTTGAAAGTCTCGAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATTGTATGGTTTCTATCTTTTTTCTTTGGTATGTTCTGTTCATTGAATAGGTTAAACATTTTGGCTCGATCACTGACCAGTGCTCCCTGTAATATAGCGTTTTGCAATTTTCCCCCCTTATTTTGCATTTTGATATATTATTACTTATTACATTTTAGAAGTAATCTCTCCCGTCAGATATGCCACTCTCTGTTAAATTAAAAATTGGAAGTGATAGTGATGATGAAATTGGTTTAAGCTTTAAATACAAACCAGAATGTCTGAAATTATTATCCTGCAAGTGAAAATTTGTGTATGATCATTCGATGTTTCTTTCTTGTGAAAAAAATTATCTGTTCAGTTAGTCTACAGTTATATTATTTCTTCCCCTCATTTAACTTAAACTGTAATACATTATACAACAGGTGGGCAGTTTGGAAGATGTTCTTAAGAAAATGGAGGTGAGGTTTCTTGATCTCAAGTAGCAGCATCTTTTAGAATATAGAAATTGCACTCCGTCTTAGTTTTCTTGATCAATTACAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCGCAACACATTCAAGAAGTGGGCAAAGCATGACATAGGCTGTGGATTCAGCCAACAGACTACACAAGAAGAATGGAAGGAGCATGGAGAGTACTGATTCAACCAACTGAGGTTAGAAAACAATAGAATTATGTTACAATTGGCCTCATGGGAGAGGAATAATAAACACTAATAGCCTTTTCTCCCTCATTAGACATCACAATGGATCTGATTCAGACATTATTTTGAGATGTTGGAGAATCTAATGCCTTCTCTTTTACGTCGAGGAGGTTAGCGAAAACATTGCGGCTGGATATCTCAGATGTGTCGAGTTTGATTTTATTTGTGTATAGCCTCTCTGTTTGACGTAGTTTTCTAGGACCAATGTAATTTAGCTTCTAAAATGGTTACCAATTCCTTAGGAGCCTGTCCCATTTTGCTCAGCCGTGTGTCGCCAAAATACTAAAGGACGGTTATTGATGTGGGAGACAGTTTATTGCAATATTTGATTTTCTTAATAAATGAACTCAAGATTCGAACTATGGACTTTTGAGATAATAATTGATTCTTTTATCTATATGTTTGAATATATCAACAATCCTATATCTTAAGGATTTTTGTAGGGATGACTTCTTTTGAGGGTCCGAATGAGATCTAGTCCAGTTTTTGAAAATGTAAGTTTTTGTTTATATCATCTTTGGGTGAAATTACCAAGACAATCAAAATACACATGCGATGGGCGAGGATCTTGCTCTCACTCCTAAATTGTTGCTCTTCCATCTCCTCCTCAATTCGCTTCTATGGTAAAAGATCTTCTCACTATTCACTTCTTGATTTCACCCAGTTTCTCCATTCATCTGTGAGGGAGGGTCGATTCCCACACTCCTAAAGATTGGACTCACAGAGGAAAGAGGTTGCAGAATGAAGAAAAAAAATCCAAGAGATTGTTGCAAAACGAAGCAAAAAACATGCAAGAGGTTGTAGAATGAAGAAATAAAAACTAAGAGGAGGTTGTTGAAGAAAAAAATTCCAAGAGGCCGTAAAACAAAGAGAAAAAAAGGTGAAGAAGGCTACCATTTTCGATAAGTTGGAGTGAGAATCGAGAAGTAAAGTCCATCAAGCGTGCATTTTTTTAAAATTTTTTAGAATTTTTTAGAATTTTAGCCATTTTCCCGTACAAAGTACATGGCTTGGTTTAGGTGGTTTGAGAATGTATGAATAAATGGCGTTGTTGATCTTATTTTCATTTGCATTTATATATATTCCATATGTGCAATCCAAATCTATTACTGTATTCTTTTTCTCCCAAAAATGAGAAAAACAATCCAACTTTGGTTGTAGATGGGGGGATGGGTAG

mRNA sequence

GGGGTTTCTCGTGGCCATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGTACCAGACTCGCAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGCCGGAGGCTAATTGGCGATCATTTCCTACCCCACCTTTCGCGTCCCTTGCCCAGCACACTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCAAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCAATTGGGTTGCTGTGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTACCAATTACGCTTGACCAGGTATATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCGTTAGAGCTTAAAGCTTCGGATACCAGAAGCAGTTTTGACGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGAAGATATAGAAAAGGAACTGTTGAAAGTCTCGAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATTGTGGGCAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCGCAACACATTCAAGAAGTGGGCAAAGCATGACATAGGCTGTGGATTCAGCCAACAGACTACACAAGAAGAATGGAAGGAGCATGGAGAGTACTGATTCAACCAACTGAGGTTAGAAAACAATAGAATTATGTTACAATTGGCCTCATGGGAGAGGAATAATAAACACTAATAGCCTTTTCTCCCTCATTAGACATCACAATGGATCTGATTCAGACATTATTTTGAGATGTTGGAGAATCTAATGCCTTCTCTTTTACGTCGAGGAGGTTAGCGAAAACATTGCGGCTGGATATCTCAGATGTGTCGAGTTTGATTTTATTTGTGTATAGCCTCTCTGTTTGACGTAGTTTTCTAGGACCAATGTAATTTAGCTTCTAAAATGGTTACCAATTCCTTAGGAGCCTGTCCCATTTTGCTCAGCCGTGTGTCGCCAAAATACTAAAGGACGGTTATTGATGTGGGAGACAGTTTATTGCAATATTTGATTTTCTTAATAAATGAACTCAAGATTCGAACTATGGACTTTTGAGATAATAATTGATTCTTTTATCTATATGTTTGAATATATCAACAATCCTATATCTTAAGGATTTTTGTAGGGATGACTTCTTTTGAGGGTCCGAATGAGATCTAGTCCAGTTTTTGAAAATGTAAGTTTTTGTTTATATCATCTTTGGGTGAAATTACCAAGACAATCAAAATACACATGCGATGGGCGAGGATCTTGCTCTCACTCCTAAATTGTTGCTCTTCCATCTCCTCCTCAATTCGCTTCTATGGTAAAAGATCTTCTCACTATTCACTTCTTGATTTCACCCAGTTTCTCCATTCATCTGTGAGGGAGGGTCGATTCCCACACTCCTAAAGATTGGACTCACAGAGGAAAGAGGTTGCAGAATGAAGAAAAAAAATCCAAGAGATTGTTGCAAAACGAAGCAAAAAACATGCAAGAGGTTGTAGAATGAAGAAATAAAAACTAAGAGGAGGTTGTTGAAGAAAAAAATTCCAAGAGGCCGTAAAACAAAGAGAAAAAAAGGTGAAGAAGGCTACCATTTTCGATAAGTTGGAGTGAGAATCGAGAAGTAAAGTCCATCAAGCGTGCATTTTTTTAAAATTTTTTAGAATTTTTTAGAATTTTAGCCATTTTCCCGTACAAAGTACATGGCTTGGTTTAGGTGGTTTGAGAATGTATGAATAAATGGCGTTGTTGATCTTATTTTCATTTGCATTTATATATATTCCATATGTGCAATCCAAATCTATTACTGTATTCTTTTTCTCCCAAAAATGAGAAAAACAATCCAACTTTGGTTGTAGATGGGGGGATGGGTAG

Coding sequence (CDS)

ATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGTACCAGACTCGCAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGCCGGAGGCTAATTGGCGATCATTTCCTACCCCACCTTTCGCGTCCCTTGCCCAGCACACTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCGGTCTACACTGTTAGCAATTCAAACAACGAGTTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCAATTGGGTTGCTGTGCTTCCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTACCAATTACGCTTGACCAGGTATATATGTTGAAAGTAGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTGTTCAGATAAAGAATGCGTTAGAGCTTAAAGCTTCGGATACCAGAAGCAGTTTTGACGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGAAGATATAGAAAAGGAACTGTTGAAAGTCTCGAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATTGTGGGCAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCGCAACACATTCAAGAAGTGGGCAAAGCATGA

Protein sequence

MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPTPPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSLEDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA

Homology

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BLAST of Clc05G22070.1 vs. NCBI nr
Match: XP_038899812.1 (protein TIC 22, chloroplastic [Benincasa hispida])

HSP 1 Score: 540.8 bits (1392), Expect = 6.9e-150
Identity = 271/278 (97.48%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           MEIPKPYPHSNPLLSVSSFI HHCTRL AELSNRLEDTKRFAGT ARRWP EANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLLSVSSFIRHHCTRLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDP+QIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPIQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHI+VGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. NCBI nr
Match: XP_023525963.1 (protein TIC 22, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.0 bits (1351), Expect = 3.9e-145
Identity = 262/278 (94.24%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYP SNP+L VSS +HHHCTRL AELSNRLE+ KRFAGTFARRWP EANWRSFPT
Sbjct: 1   METPKPYPRSNPMLFVSSSVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           PPFASLAQHT+ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           +RSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKEL KVSKASRGLGTSQHI+VGSL
Sbjct: 181 SRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. NCBI nr
Match: XP_022982278.1 (protein TIC 22, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 524.6 bits (1350), Expect = 5.1e-145
Identity = 261/278 (93.88%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYP SNP+L  SSF+HHHCTRL AELSNRLE+ KRFAGTFARRWP EANWRSFPT
Sbjct: 1   MENPKPYPRSNPMLFASSFVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           PPFASLAQHT+ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           ++SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKEL KVSKASRGLGTSQHI+VGSL
Sbjct: 181 SKSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. NCBI nr
Match: XP_022937273.1 (protein TIC 22, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYP SN LLSVSSFIHHHCTR  AELSNRLE+TKRFAGTFA+RWP EANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQHT+ALAATLSSDQ+AKSL+GTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           T+SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHI+VGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHI+EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. NCBI nr
Match: XP_008452540.1 (PREDICTED: protein TIC 22, chloroplastic [Cucumis melo] >KAA0064379.1 protein TIC 22 [Cucumis melo var. makuwa] >TYK20208.1 protein TIC 22 [Cucumis melo var. makuwa])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 260/278 (93.53%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           MEIPKPY HSNPL+SVSSFIHHHCT+L AELSNRLEDTKRFAGT ARRWP EANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+HTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVY+LKVEGIAFRFLPDP+QIKNALELKA +
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           T SSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKVSKASR LGTSQHI+VGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. ExPASy Swiss-Prot
Match: Q9SZB2 (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-97
Identity = 182/269 (67.66%), Postives = 222/269 (82.53%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT-PPFASLAQH 70
           NP LS SSFIHH CTR +++LS R+EDTKRFA T A R        S PT PPFAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
                  TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQVY+LKVEGI+FRFLPDP+QIKNALELK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K ++ASRG    Q I+VGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLEDVLRKME 247

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 278
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of Clc05G22070.1 vs. ExPASy Swiss-Prot
Match: Q9ZST9 (Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.5e-96
Identity = 185/265 (69.81%), Postives = 214/265 (80.75%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPTPPFASLAQHT 70
           NPLLS S FI+HH   LA     RLE+TKR AGT       +++ R+ P           
Sbjct: 8   NPLLSFSRFINHHSNHLA----TRLEETKRLAGTLI-----QSHTRTKP----------- 67

Query: 71  HALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQV 130
            A AATL+ + VAKSL GT+VYTVSNS+NEFVL+SD  G KSIGLLCFR+EDAE FLAQV
Sbjct: 68  -AFAATLTPNHVAKSLAGTSVYTVSNSDNEFVLMSDAEGAKSIGLLCFRQEDAEAFLAQV 127

Query: 131 RSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGVPV 190
           RSRK+E R  AKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALEL+A++ R SFDGVPV
Sbjct: 128 RSRKKEFRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAAN-RGSFDGVPV 187

Query: 191 FQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSLEDVLKKMELN 250
           FQSDLL+VKKKNKRYCP+YF+KED+E EL KVS++S+G+G SQHI+VGS EDVLKKMEL+
Sbjct: 188 FQSDLLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQHIMVGSFEDVLKKMELS 247

Query: 251 EKNSAWEDLIFIPPGKSHSQHIQEV 276
           EK+S WEDL+FIPPGK HSQH+QEV
Sbjct: 248 EKSSGWEDLVFIPPGKKHSQHMQEV 250

[Close]

BLAST of Clc05G22070.1 vs. ExPASy Swiss-Prot
Match: F4J469 (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-36
Identity = 84/195 (43.08%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 77  LSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS+D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELK--ASDTRSSFDGVPVFQS 196
           +R   +KVV + L +V+ LKV G+AFR +P+  Q+KNAL+ +  A      F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTS---QHIIVGSLEDVLKKMELN 256
             LI++ +N  Y P++F KED+EK L++ S     L  +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

Query: 257 EKNSAWEDLIFIPPG 266
              S W+D++FIPPG
Sbjct: 290 STTSNWDDIVFIPPG 303

[Close]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL
Match: A0A6J1J4F6 (protein TIC 22, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481156 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145
Identity = 261/278 (93.88%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYP SNP+L  SSF+HHHCTRL AELSNRLE+ KRFAGTFARRWP EANWRSFPT
Sbjct: 1   MENPKPYPRSNPMLFASSFVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           PPFASLAQHT+ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           ++SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKEL KVSKASRGLGTSQHI+VGSL
Sbjct: 181 SKSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL
Match: A0A5D3D9N1 (Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003450 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.2e-145
Identity = 260/278 (93.53%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           MEIPKPY HSNPL+SVSSFIHHHCT+L AELSNRLEDTKRFAGT ARRWP EANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+HTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVY+LKVEGIAFRFLPDP+QIKNALELKA +
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           T SSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKVSKASR LGTSQHI+VGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL
Match: A0A6J1FFN8 (protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.2e-145
Identity = 261/278 (93.88%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYP SN LLSVSSFIHHHCTR  AELSNRLE+TKRFAGTFA+RWP EANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQHT+ALAATLSSDQ+AKSL+GTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           T+SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHI+VGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHI+EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL
Match: A0A1S3BV89 (protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.2e-145
Identity = 260/278 (93.53%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           MEIPKPY HSNPL+SVSSFIHHHCT+L AELSNRLEDTKRFAGT ARRWP EANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+HTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVY+LKVEGIAFRFLPDP+QIKNALELKA +
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           T SSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKVSKASR LGTSQHI+VGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL
Match: A0A6J1CN57 (protein TIC 22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012654 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.7e-144
Identity = 259/278 (93.17%), Postives = 266/278 (95.68%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT 60
           ME PKPYPH+NPLLS+SSFIH+HC RL AE SNRLEDTKRFAGT ARRWP EANWR  PT
Sbjct: 1   METPKPYPHANPLLSISSFIHNHCIRLGAEFSNRLEDTKRFAGTLARRWPAEANWRFLPT 60

Query: 61  PPFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASL QHT+ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVL+SDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLTQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLVSDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180
           EDAETFLAQ RSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD
Sbjct: 121 EDAETFLAQARSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSL 240
           TRSSFDGVPVFQSDLLIVKKKNKRYCPIYF KEDIE+ELLKVSKASRGLGTSQHI+VGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFAKEDIERELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 279
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Clc05G22070.1 vs. TAIR 10
Match: AT4G33350.1 (Tic22-like family protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-98
Identity = 182/269 (67.66%), Postives = 222/269 (82.53%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT-PPFASLAQH 70
           NP LS SSFIHH CTR +++LS R+EDTKRFA T A R        S PT PPFAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
                  TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQVY+LKVEGI+FRFLPDP+QIKNALELK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K ++ASRG    Q I+VGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLEDVLRKME 247

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 278
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of Clc05G22070.1 vs. TAIR 10
Match: AT4G33350.2 (Tic22-like family protein )

HSP 1 Score: 313.5 bits (802), Expect = 1.7e-85
Identity = 166/269 (61.71%), Postives = 200/269 (74.35%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLAAELSNRLEDTKRFAGTFARRWPPEANWRSFPT-PPFASLAQH 70
           NP LS SSFIHH CTR +++LS R+EDTKRFA T A R        S PT PPFAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
                  TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQVY+LKVEGI+FRFLPDP+QIKNALELK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIIVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP                             VGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCP-----------------------------VGSLEDVLRKME 241

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 278
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 241

[Close]

BLAST of Clc05G22070.1 vs. TAIR 10
Match: AT3G23710.1 (Tic22-like family protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 84/195 (43.08%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 77  LSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS+D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELK--ASDTRSSFDGVPVFQS 196
           +R   +KVV + L +V+ LKV G+AFR +P+  Q+KNAL+ +  A      F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTS---QHIIVGSLEDVLKKMELN 256
             LI++ +N  Y P++F KED+EK L++ S     L  +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

Query: 257 EKNSAWEDLIFIPPG 266
              S W+D++FIPPG
Sbjct: 290 STTSNWDDIVFIPPG 303

The following BLAST results are available for this feature:

BLAST of Clc05G22070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899812.1	6.9e-150	97.48	protein TIC 22, chloroplastic [Benincasa hispida]	[more]
XP_023525963.1	3.9e-145	94.24	protein TIC 22, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982278.1	5.1e-145	93.88	protein TIC 22, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_022937273.1	1.5e-144	93.88	protein TIC 22, chloroplastic-like [Cucurbita moschata]	[more]
XP_008452540.1	1.5e-144	93.53	PREDICTED: protein TIC 22, chloroplastic [Cucumis melo] >KAA0064379.1 protein TI...	[more]

BLAST of Clc05G22070.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZB2	1.8e-97	67.66	Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1	[more]
Q9ZST9	3.5e-96	69.81	Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1	[more]
F4J469	1.8e-36	43.08	Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=...	[more]

BLAST of Clc05G22070.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4F6	2.5e-145	93.88	protein TIC 22, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A5D3D9N1	7.2e-145	93.53	Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00345...	[more]
A0A6J1FFN8	7.2e-145	93.88	protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609...	[more]
A0A1S3BV89	7.2e-145	93.53	protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1	[more]
A0A6J1CN57	4.7e-144	93.17	protein TIC 22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012654 PE=...	[more]

BLAST of Clc05G22070.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33350.1	1.3e-98	67.66	Tic22-like family protein	[more]
AT4G33350.2	1.7e-85	61.71	Tic22-like family protein	[more]
AT3G23710.1	1.3e-37	43.08	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1350.100		coord: 165..247 e-value: 7.3E-16 score: 60.5
None	No IPR available	GENE3D	3.40.1350.100		coord: 90..164 e-value: 7.3E-16 score: 60.5
None	No IPR available	PANTHER	PTHR33926:SF4	PROTEIN TIC 22, CHLOROPLASTIC	coord: 8..275
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 13..274 e-value: 1.6E-109 score: 364.9
IPR007378	Tic22-like	PANTHER	PTHR33926	PROTEIN TIC 22, CHLOROPLASTIC	coord: 8..275

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc05G22070	Clc05G22070	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30441027..30441429	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30441688..30441750	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30442368..30442442	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30443003..30443053	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30443344..30443403	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30443473..30443544	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30443946..30443981	exon
Clc05G22070.1-exon	Clc05G22070.1-exon-ClcChr05:30444064..30445459	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G22070.1-five_prime_utr	Clc05G22070.1-five_prime_utr-ClcChr05:30441027..30441042	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30441043..30441429	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30441688..30441750	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30442368..30442442	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30443003..30443053	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30443344..30443403	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30443473..30443544	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30443946..30443981	CDS
Clc05G22070.1-cds	Clc05G22070.1-cds-ClcChr05:30444064..30444156	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G22070.1-three_prime_utr	Clc05G22070.1-three_prime_utr-ClcChr05:30444157..30445459	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc05G22070.1	Clc05G22070.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009507	chloroplast