Clc05G00950.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc05G00950.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein yippee-like
Location	ClcChr05: 678715 .. 679605 (-)
Sequence length	768
RNA-Seq Expression	Clc05G00950.1
Synteny	Clc05G00950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTGAAAAATCATATTTAAGAACCTAACACCCCTATTCTTATTATTGTGAAATTATTATAGTTAAGAAAATCCCTGAATGATCGGCACCAATTGGCAAAAGTTGATCCTTTAAAAAGAACAACTTTACAAAGCTTTCTGAGTGTTGGTTTGCTTTTTCTAATAAGTGAGTGGTTTTTGTTTAGATAGAAAGAAAGAAGGTGAAGGCATCTCCATCAATGGCGGATTTGATCACCGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAATCTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGGTGAGTGCCTTCAAAGAAATTGGGGTTTTTTTTTTTTTTTTTCTTTCTTTGGTTAAATTGAGTGTTTGTTTAATGAATTTAGAAGTGAAGTGGGTTTGTTTTGTTTTGTTGTTAATTGTGTAGTCAGTGAGAGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTAAGAGAGGGAATTCAACAGGAGAAGATGTTAATAAGTGGAACATATATAGTTTGTGATTTGTTTTGTTGTGAGTGTGGACAAATCTTGGGTTGGAAATACATCAAAGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAATGCTTCTTCCTAAACTGCTTTACTTTATTCATTTACTCTTTATTTCCACTTTTCGTCTTTAATCACTTGCTTACAATTAGTCTTTACAACTCCTTCCTAACATTTTTCTCATCTTCTTAATTGTGCATTTCATCCAGGGAATTCGACATGTACCCTGTTTTTCTTTTACGACATGTAGATAAAAAATTAAACCTTTAACCTCAAACTTGATAATACAAACACTATAAACAATAACTTCG

mRNA sequence

TTTTAATTGAAAAATCATATTTAAGAACCTAACACCCCTATTCTTATTATTGTGAAATTATTATAGTTAAGAAAATCCCTGAATGATCGGCACCAATTGGCAAAAGTTGATCCTTTAAAAAGAACAACTTTACAAAGCTTTCTGAGTGTTGGTTTGCTTTTTCTAATAAGTGAGTGGTTTTTGTTTAGATAGAAAGAAAGAAGGTGAAGGCATCTCCATCAATGGCGGATTTGATCACCGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAATCTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGTCAGTGAGAGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTAAGAGAGGGAATTCAACAGGAGAAGATGTTAATAAGTGGAACATATATAGTTTGTGATTTGTTTTGTTGTGAGTGTGGACAAATCTTGGGTTGGAAATACATCAAAGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAATGCTTCTTCCTAAACTGCTTTACTTTATTCATTTACTCTTTATTTCCACTTTTCGTCTTTAATCACTTGCTTACAATTAGTCTTTACAACTCCTTCCTAACATTTTTCTCATCTTCTTAATTGTGCATTTCATCCAGGGAATTCGACATGTACCCTGTTTTTCTTTTACGACATGTAGATAAAAAATTAAACCTTTAACCTCAAACTTGATAATACAAACACTATAAACAATAACTTCG

Coding sequence (CDS)

ATGGCGGATTTGATCACCGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAATCTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGTCAGTGAGAGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTAAGAGAGGGAATTCAACAGGAGAAGATGTTAATAAGTGGAACATATATAGTTTGTGATTTGTTTTGTTGTGAGTGTGGACAAATCTTGGGTTGGAAATACATCAAAGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAATGCTTCTTCCTAA

Protein sequence

MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS

Homology

[Close]

BLAST of Clc05G00950.1 vs. NCBI nr
Match: XP_008437856.1 (PREDICTED: protein yippee-like At4g27745 [Cucumis melo] >KAA0048869.1 protein yippee-like [Cucumis melo var. makuwa] >TYK20821.1 protein yippee-like [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGT 60
           +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG 
Sbjct: 5   VADLMRERIYSCQNCRNQISRHDDIISKGFQSVKGRAFLFYEARNVREGAEENKMFISGN 64

Query: 61  YIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS 107
           Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT+ASS
Sbjct: 65  YKVCDLYCNECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITDASS 110

[Close]

BLAST of Clc05G00950.1 vs. NCBI nr
Match: XP_022924572.1 (protein yippee-like At4g27745 isoform X2 [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 37  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 96

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 97  TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 140

[Close]

BLAST of Clc05G00950.1 vs. NCBI nr
Match: XP_023527393.1 (protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >KAG6582686.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 1   MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 60

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 61  TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 104

[Close]

BLAST of Clc05G00950.1 vs. NCBI nr
Match: XP_022979315.1 (protein yippee-like At4g27745 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 37  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 96

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 97  TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 140

[Close]

BLAST of Clc05G00950.1 vs. NCBI nr
Match: XP_022924571.1 (protein yippee-like At4g27745 isoform X1 [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 47  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 106

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 107 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 150

[Close]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot
Match: Q9T096 (Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGT 60
           MA  I  RLYSC NCRN +  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G 
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  YIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
           + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK KI
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKI 101

[Close]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 9   LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFC 68
           +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  CECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
             CG ++GWKY  AYD SQKYKEGK +LE+FK+
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKV 105

[Close]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 41/92 (44.57%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 10  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCC 69
           YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C 
Sbjct: 14  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 73

Query: 70  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
           +CG  +GWKY  A++ +QKYKEGK VLE++K+
Sbjct: 74  KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-21
Identity = 44/95 (46.32%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 8   RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLF 67
           ++YSC++C   ++  ++I+SK F    G+A+LF +  NV  G  + +M+++G + V D+F
Sbjct: 12  KIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIF 71

Query: 68  CCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT 103
           C  CG I+GWKY  A++ SQKYKEGK VLE+FKIT
Sbjct: 72  CVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKIT 106

[Close]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-21
Identity = 43/96 (44.79%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 8   RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLF 67
           R Y C+ CR  ++  DD++S+ F   RG+A+LF  + N+  G  +E++++SG + V D+F
Sbjct: 12  RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIF 71

Query: 68  CCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           CC CGQ +GWKY  A++ +QKYKEGK VLE+ +I +
Sbjct: 72  CCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVD 107

[Close]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL
Match: A0A5A7U5X0 (Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00830 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGT 60
           +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG 
Sbjct: 5   VADLMRERIYSCQNCRNQISRHDDIISKGFQSVKGRAFLFYEARNVREGAEENKMFISGN 64

Query: 61  YIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS 107
           Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT+ASS
Sbjct: 65  YKVCDLYCNECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITDASS 110

[Close]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL
Match: A0A1S3AV44 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103483163 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGT 60
           +ADL+ ER+YSCQNCRNQISRHDDIISKGFQSV+GRAFLFYEARNVREG ++ KM ISG 
Sbjct: 5   VADLMRERIYSCQNCRNQISRHDDIISKGFQSVKGRAFLFYEARNVREGAEENKMFISGN 64

Query: 61  YIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS 107
           Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT+ASS
Sbjct: 65  YKVCDLYCNECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITDASS 110

[Close]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL
Match: A0A6J1ISW6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111479077 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 37  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 96

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 97  TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 140

[Close]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL
Match: A0A6J1E9T8 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111432013 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 47  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 106

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 107 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 150

[Close]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL
Match: A0A6J1E9D7 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111432013 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MADL-ITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISG 60
           MADL I  RLYSCQNC N++SRHDDIISKGFQS+RGRAFLFYEARNV EG QQEKML+SG
Sbjct: 37  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 96

Query: 61  TYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN 104
           TYIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Sbjct: 97  TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 140

[Close]

BLAST of Clc05G00950.1 vs. TAIR 10
Match: AT4G27745.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-27
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MADLITERLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGT 60
           MA  I  RLYSC NCRN +  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G 
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  YIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
           + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK KI
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKI 101

[Close]

BLAST of Clc05G00950.1 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 108.2 bits (269), Expect = 4.0e-24
Identity = 44/95 (46.32%), Postives = 70/95 (73.68%), Query Frame = 0


Query: 8   RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLF 67
           ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G + V D+F
Sbjct: 12  KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68  CCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT 103
           C  CG I+GWKY  A++ +QKYKEGK VLE+FKI+
Sbjct: 72  CVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKIS 106

[Close]

BLAST of Clc05G00950.1 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.8e-23
Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 8   RLYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLF 67
           ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G + V D+F
Sbjct: 12  KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68  CCECGQILGWKYIKAYDDSQKYKEGKVVLEKF 100
           C  CG I+GWKY  A++ +QKYKEGK VLE+F
Sbjct: 72  CVSCGSIVGWKYETAHEKNQKYKEGKSVLERF 103

[Close]

BLAST of Clc05G00950.1 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 9   LYSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFC 68
           +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  CECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
             CG ++GWKY  AYD SQKYKEGK +LE+FK+
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKV 105

[Close]

BLAST of Clc05G00950.1 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22
Identity = 41/92 (44.57%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 10  YSCQNCRNQISRHDDIISKGFQSVRGRAFLFYEARNVREGIQQEKMLISGTYIVCDLFCC 69
           YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C 
Sbjct: 14  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 73

Query: 70  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI 102
           +CG  +GWKY  A++ +QKYKEGK VLE++K+
Sbjct: 74  KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

The following BLAST results are available for this feature:

BLAST of Clc05G00950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437856.1	2.1e-46	85.85	PREDICTED: protein yippee-like At4g27745 [Cucumis melo] >KAA0048869.1 protein yi...	[more]
XP_022924572.1	2.8e-43	84.62	protein yippee-like At4g27745 isoform X2 [Cucurbita moschata]	[more]
XP_023527393.1	2.8e-43	84.62	protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >KAG6582686.1 Protein...	[more]
XP_022979315.1	2.8e-43	84.62	protein yippee-like At4g27745 [Cucurbita maxima]	[more]
XP_022924571.1	2.8e-43	84.62	protein yippee-like At4g27745 isoform X1 [Cucurbita moschata]	[more]

BLAST of Clc05G00950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T096	1.4e-26	54.46	Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 ...	[more]
Q9SR97	1.4e-21	48.39	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9C777	1.4e-21	44.57	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
P59234	2.4e-21	46.32	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9FN32	3.1e-21	44.79	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of Clc05G00950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5X0	1.0e-46	85.85	Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G...	[more]
A0A1S3AV44	1.0e-46	85.85	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103483163 PE=3 SV=1	[more]
A0A6J1ISW6	1.4e-43	84.62	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111479077 PE=3 SV=1	[more]
A0A6J1E9T8	1.4e-43	84.62	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111432013 PE=3 SV=1	[more]
A0A6J1E9D7	1.4e-43	84.62	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111432013 PE=3 SV=1	[more]

BLAST of Clc05G00950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27745.1	1.0e-27	54.46	Yippee family putative zinc-binding protein	[more]
AT2G40110.1	4.0e-24	46.32	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	5.8e-23	45.65	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	1.0e-22	48.39	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	1.0e-22	44.57	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 10..103 e-value: 3.3E-12 score: 46.5
None	No IPR available	PANTHER	PTHR13848:SF50	PROTEIN YIPPEE-LIKE	coord: 3..104
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 3..104
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 8..105 score: 38.604263

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc05G00950	Clc05G00950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G00950.1-exon	Clc05G00950.1-exon-ClcChr05:678715..679168	exon
Clc05G00950.1-exon	Clc05G00950.1-exon-ClcChr05:679292..679605	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G00950.1-three_prime_utr	Clc05G00950.1-three_prime_utr-ClcChr05:678715..678940	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G00950.1-cds	Clc05G00950.1-cds-ClcChr05:678941..679168	CDS
Clc05G00950.1-cds	Clc05G00950.1-cds-ClcChr05:679292..679384	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc05G00950.1-five_prime_utr	Clc05G00950.1-five_prime_utr-ClcChr05:679385..679605	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc05G00950.1	Clc05G00950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding