Clc01G26530.2 (mRNA) Watermelon (cordophanus) v2

Overview
NameClc01G26530.2
TypemRNA
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr01: 36572030 .. 36574426 (+)
Sequence length192
RNA-Seq ExpressionClc01G26530.2
SyntenyClc01G26530.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGATGGTAAATACGGAAGAGGAATGGGGAAGAAACGGAAATGGCGAACAGAAGTGGGGAGAATGTATATGTAGAGTTCACCCATTGGTTTTCTCAAACTTGGGACGACAAGGGATGCGAAATCAAGCTCCTTCCATTGTATAAGTATCCAAACCTTTACGTTCCCCAAACCCCATTATATATACATATGTATATATATCTTTCTCTCTCGCCTTGCCTTCTTCACCATTGATTCAACCAACGTCCTGCTCAAGCTTTTAGCTTCTGATGACATTGTGATTTATACCGAGCGTCGCAAATTGTGCAACTTTTTGGCTTCTGGGTATGTTTTCGCAGCATCTTATTCATTGAAATCTCTTATTCTCTGTCTCTTTATCTCGTATTCCCTCTAGTCTTTTGTTGTTATGAGTGTTGTGATTTTGATCTTAAGCTTTTTTCTATATTCTTGACTGAATCGAAGCTTTCTGTTTCTCCTTGTAATGGGAAATTCTCACTGTCGCCGGTTAACCGATCAGCTGAGAAATCATTGCAACATTGTCTGTCCAGATTATTTCCAATGATCTGATTGTAGTTGTTTGCTTGTTTGGTTTTCTGAAGAAAGTCAAACTTTGTTTTTTCACATTTTTTAATCGTTTTCTTGAGGATCTCTAAGTCAAGTGAAGAACATTTTTCAGGCTCCACAGTTAGTTCTCGACTCTGTTAGTAGCTCTGAAGTGAAGCTAACCCTATTCATGTCCTTTATGTTCATTGATTAAAAGTAAGCTATGTACACTCTGTTTCTGCAACTTTCTTTGTTGATATCTCCCGAAGAAAAAGGCCTCGGGGCAGGCATTTATGTATTTGATGATCGAAGATCTTTTTGGCGCTTTGATGTTTTCAGATTCTTCTTTGATCATTAACAATATACTCTCTGTAGAGTTTCCTTTACGGCGGCTGACTTCCTAATTTATTTTCTTTTTCTTTGTTAGGTCTGCTTAGTGTGTTGGCATTGATATTTTATTTTTGGCTAAATGTATCGATAAAGTCTCGTGTGTGGTTTTTCAATTTTGTTCCTATTCTTTCAAAATTTTTAATTTTGTTTTAACGTTCAAATTACTTCAATTGAATCCTTGATGTGGAATTTAACATGAAATGAAAAATAAGATGGTATTGCCAATCTTTGTGTGTCGGAAAAAATGAAATCCTTTTAAATTGTTACATGCTACCGAAAACTTATCTTTCTCCTTCCATCGATCAAACTCTTTCCTTCCATCTCTCTCTTACTCTCTCAACCTCTCAGAATCCCTCTGTTTCTCTCACTCACAGTCATTTCTCTCTTACTGTCCCGATTTCTCTCACATTTTGTCTTTTTCATTGTCTCTAGCTCTGTGCTTTTCTTATTTTGGTTTGTTCAAGTAATGGTCAGGTTAAAGTTGAAAAGTAGTCAAATGGGTGCTTTAACTTTTATGAACCTTTGTACGAGGACTGCGTTGAAATACCTTGACACAGTAGGGAGCAAATAGAACGTTTTTCAAAAAAGAGGGGAATGAAATTGGAAACCGTCTTAGGGATTAATCTTTATTTTAGACTTGAATTTTTCATTATCAGTTAAACTGCCCTAAATTTAATGGACATTGACGTCTGCACCCAGAAGATCAAAGGCCTAGTTTTTGTAAACCCCCCACCCCCTTCCTTTTTTTGGGTATTTCATCATATCAATGAACATTTGTTTCTCATTAAAAAAAGATAATAATAAAATAAAAAACACCCAAGAAATTCAGTGCAGTGCAGGTAAGCAAGTAGAATTATCTAGTGAGCTACAGTAGGAACCTTAAAAGATCGGGTTGTTGGTTGATTGAAGAGAATACTGTGAGATGCTTTAAGTTGTTCATAAAGTTCAAAGTGGAGATCCACAAACTACCTGGTATTGGAGTTTAAGAAAATTACAAATTATAACTGACTCGCATCATAGATATATACTTGTTATTTTCTGCTTATTGTTCAAATTATCATCTTTCCTTATTTCTCATCACTTAAGCTTTTCGCATGCATTTTCCTATTAGAATCATTCACCATCTTATTAAACTTGTGGCGTGAGCCAAAAGGTCTAAATTATGATCTTATGTACAAAAAGGTCGGAGTATTTGGAATTTGTAGAGAAAAGACATCTGTTTTTGTAATTCAACACTTGAATTGAATTGTGCACAAGACACGTTACTTTTTATCTTCTTGAACAGCTGTTGTGTATTGATAACCTAAGATGTTCATATACTTAAATGCGGGACTTATTGGTTAATGCTGTAGCTGGCTGCTTTTGCTTGAAGGCTGCTAGCTGGTTGCTTTCAGATAAAATTCCTTTAGCAGCGATTGTTGATATCATTCACTTTGGAACTGCAACGTTTTCTTCATTAA

mRNA sequence

ATGGGTAAGATGGTAAATACGGAAGAGGAATGGGGAAGAAACGGAAATGGCGAACAGAAGTGGGGAGAATGTATATGTAGAGTTCACCCATTGGTTTTCTCAAACTTGGGACGACAAGGGATGCGAAATCAAGCTCCTTCCATTCGATTGTTGATATCATTCACTTTGGAACTGCAACGTTTTCTTCATTAA

Coding sequence (CDS)

ATGGGTAAGATGGTAAATACGGAAGAGGAATGGGGAAGAAACGGAAATGGCGAACAGAAGTGGGGAGAATGTATATGTAGAGTTCACCCATTGGTTTTCTCAAACTTGGGACGACAAGGGATGCGAAATCAAGCTCCTTCCATTCGATTGTTGATATCATTCACTTTGGAACTGCAACGTTTTCTTCATTAA

Protein sequence

MGKMVNTEEEWGRNGNGEQKWGECICRVHPLVFSNLGRQGMRNQAPSIRLLISFTLELQRFLH
Homology
The following BLAST results are available for this feature:
BLAST of Clc01G26530.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G26530.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G26530.2 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G26530.2 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Clc01G26530Clc01G26530gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc01G26530.2-exonClc01G26530.2-exon-ClcChr01:36572030..36572173exon
Clc01G26530.2-exonClc01G26530.2-exon-ClcChr01:36574379..36574426exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Clc01G26530.2-cdsClc01G26530.2-cds-ClcChr01:36572030..36572173CDS
Clc01G26530.2-cdsClc01G26530.2-cds-ClcChr01:36574379..36574426CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Clc01G26530.2Clc01G26530.2-proteinpolypeptide