Clc01G18910.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc01G18910.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	C2 domain-containing protein
Location	ClcChr01: 31351483 .. 31352569 (-)
Sequence length	1087
RNA-Seq Expression	Clc01G18910.1
Synteny	Clc01G18910.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCACTAAACTTTCCTCTATAAATATGTTTACAAGTCCCAAAATCCTTCTTCACTACACTAGTTAAGAATTAACACTCTTCAATAATGGACGCCACTCAAAAACTCTCTTTCTTCAACTGCGAAATCAGAATCCTAGAAGCCAAAAACATAGAGTTCACATCTCCAAAGAATCTCTTCGTAAGATATTATCTTTCTGCAGGCAACAACAACAGGATTCGTCTCAACACAGCACAAATCTCTTCCATCTCCGACTTCATATGGAACCAATCTTTTTCTTTGGAGTGTTTGGGTTCACAAGACTCCATCCACACCCTCCAACAATCGACCATCGTCTTTGAGCTCCGGCGGGCAAAAATCCGACCTGTTTTCGGCAGAGTTTTCGGTCGGTCGTCGTCGCAGCTTCTGGGTAGGGCTGAGATCCCTTGGAGTCAGGTTTTTGAATCCCCAAAGATGGAAATTGAGAGATGTGTGTCGTTGGTTTCAGGAAATAATAATGAGTGTGTTAAGCAACCCAAATTGAAGATGGGGATGAGAGTGAGAGTTCCGGCAGAAATGGAGATCATGAACAAGAAGATCAAGAGAACTAGAAAGTGGAAGGATGAGTGTGGATGCTGTGAATCATCCAAAGTGGGAGATTTTTGTGGGGATTATGACCTCTTTGCTCTTGCTGCTGCCATGGAATTCATGTAGCAACATTTTCTTTTTTCTTGTTAGCGGAAGAGATTCATATATGCCCACTATGAATATTGTTTATTTTCTTTAATTATTAGTTTATTTAGTTCAACAATTGTGGGTGGAAGTTGAACTTCCAACCTCTAAGGAAAAAAAAACATGTCAATTAGTCACTTTGATAATTATATGAATTTATGAATTTTTGTTATGGGAGAATTATGGAGTGAGAGTGCTTTTGTTGAGTACTTTTTGGAGATGTTACTTGTTATGTTAGGGTTTAGGAAAAGAAAAGGCATATGTAATTGTTGTAGCAAGACTCCAGAGGAATATTTGGGGAAAATTAAAGAATAGTTTTGAGGTTTATGAAATTTTCCTACAATTAATATAATATTGTGCATTATTTTCCAACAA

mRNA sequence

AAAAGCACTAAACTTTCCTCTATAAATATGTTTACAAGTCCCAAAATCCTTCTTCACTACACTAGTTAAGAATTAACACTCTTCAATAATGGACGCCACTCAAAAACTCTCTTTCTTCAACTGCGAAATCAGAATCCTAGAAGCCAAAAACATAGAGTTCACATCTCCAAAGAATCTCTTCGTAAGATATTATCTTTCTGCAGGCAACAACAACAGGATTCGTCTCAACACAGCACAAATCTCTTCCATCTCCGACTTCATATGGAACCAATCTTTTTCTTTGGAGTGTTTGGGTTCACAAGACTCCATCCACACCCTCCAACAATCGACCATCGTCTTTGAGCTCCGGCGGGCAAAAATCCGACCTGTTTTCGGCAGAGTTTTCGGTCGGTCGTCGTCGCAGCTTCTGGGTAGGGCTGAGATCCCTTGGAGTCAGGTTTTTGAATCCCCAAAGATGGAAATTGAGAGATGTGTGTCGTTGGTTTCAGGAAATAATAATGAGTGTGTTAAGCAACCCAAATTGAAGATGGGGATGAGAGTGAGAGTTCCGGCAGAAATGGAGATCATGAACAAGAAGATCAAGAGAACTAGAAAGTGGAAGGATGAGTGTGGATGCTGTGAATCATCCAAAGTGGGAGATTTTTGTGGGGATTATGACCTCTTTGCTCTTGCTGCTGCCATGGAATTCATGTAGCAACATTTTCTTTTTTCTTGTTAGCGGAAGAGATTCATATATGCCCACTATGAATATTGTTTATTTTCTTTAATTATTAGTTTATTTAGTTCAACAATTGTGGGTGGAAGTTGAACTTCCAACCTCTAAGGAAAAAAAAACATGTCAATTAGTCACTTTGATAATTATATGAATTTATGAATTTTTGTTATGGGAGAATTATGGAGTGAGAGTGCTTTTGTTGAGTACTTTTTGGAGATGTTACTTGTTATGTTAGGGTTTAGGAAAAGAAAAGGCATATGTAATTGTTGTAGCAAGACTCCAGAGGAATATTTGGGGAAAATTAAAGAATAGTTTTGAGGTTTATGAAATTTTCCTACAATTAATATAATATTGTGCATTATTTTCCAACAA

Coding sequence (CDS)

ATGGACGCCACTCAAAAACTCTCTTTCTTCAACTGCGAAATCAGAATCCTAGAAGCCAAAAACATAGAGTTCACATCTCCAAAGAATCTCTTCGTAAGATATTATCTTTCTGCAGGCAACAACAACAGGATTCGTCTCAACACAGCACAAATCTCTTCCATCTCCGACTTCATATGGAACCAATCTTTTTCTTTGGAGTGTTTGGGTTCACAAGACTCCATCCACACCCTCCAACAATCGACCATCGTCTTTGAGCTCCGGCGGGCAAAAATCCGACCTGTTTTCGGCAGAGTTTTCGGTCGGTCGTCGTCGCAGCTTCTGGGTAGGGCTGAGATCCCTTGGAGTCAGGTTTTTGAATCCCCAAAGATGGAAATTGAGAGATGTGTGTCGTTGGTTTCAGGAAATAATAATGAGTGTGTTAAGCAACCCAAATTGAAGATGGGGATGAGAGTGAGAGTTCCGGCAGAAATGGAGATCATGAACAAGAAGATCAAGAGAACTAGAAAGTGGAAGGATGAGTGTGGATGCTGTGAATCATCCAAAGTGGGAGATTTTTGTGGGGATTATGACCTCTTTGCTCTTGCTGCTGCCATGGAATTCATGTAG

Protein sequence

MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWNQSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFESPKMEIERCVSLVSGNNNECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCESSKVGDFCGDYDLFALAAAMEFM

Homology

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BLAST of Clc01G18910.1 vs. NCBI nr
Match: XP_038882269.1 (uncharacterized protein LOC120073498 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 6.8e-83
Identity = 165/201 (82.09%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M A+QKLS FNCEIRILEAKNIEFTSPKNLFVRYYLS  NN RIRLNT QISS+SDF WN
Sbjct: 1   MGASQKLSSFNCEIRILEAKNIEFTSPKNLFVRYYLSTDNNKRIRLNTTQISSVSDFTWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSFSLECLGSQDSIH+LQQSTIVFELR+AK RPVFG     SSS+LLGRAEIPWS+VFES
Sbjct: 61  QSFSLECLGSQDSIHSLQQSTIVFELRQAKSRPVFG-----SSSRLLGRAEIPWSEVFES 120

Query: 121 PKMEIERCVSLVSGNNNECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCESS 180
             M IER VSLVS NN   VKQPKLK+GMRVRVP EME MNKK+KR RKW+DECGCCESS
Sbjct: 121 ANMGIERWVSLVSANNG-TVKQPKLKVGMRVRVPEEME-MNKKMKRFRKWQDECGCCESS 180

Query: 181 KVGDFCGDYDLFALAAAMEFM 202
           KVGDFC DY+LFALAAAMEF+
Sbjct: 181 KVGDFCEDYELFALAAAMEFL 194

[Close]

BLAST of Clc01G18910.1 vs. NCBI nr
Match: XP_011657970.1 (uncharacterized protein LOC105435926 [Cucumis sativus] >KGN48752.1 hypothetical protein Csa_003996 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 4.1e-80
Identity = 155/202 (76.73%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNI F SPKNLFVRYYLS   N +IRLNT Q+SSIS F+WN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIGFKSPKNLFVRYYLSTDPNKKIRLNTTQVSSISHFVWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFELRRAK R VFG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELRRAKTRAVFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKMEIERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCES 180
             MEIER VS+V GN N CV KQPKLK+GMRVRVP EME+++KKIKR RKWKDECGCCES
Sbjct: 121 QNMEIERWVSMVCGNKNGCVYKQPKLKVGMRVRVPEEMEMVDKKIKRIRKWKDECGCCES 180

Query: 181 SKVGDFCGDYDLFALAAAMEFM 202
           SKVGDFCGD++LFAL AAMEF+
Sbjct: 181 SKVGDFCGDFELFALTAAMEFL 197

[Close]

BLAST of Clc01G18910.1 vs. NCBI nr
Match: KAA0036300.1 (putative Nitric oxide synthase-interacting protein [Cucumis melo var. makuwa] >TYK12694.1 putative Nitric oxide synthase-interacting protein [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 6.0e-79
Identity = 158/203 (77.83%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNIEF SPKNLFVRYYLS   N ++RLNT Q+SSISDFIWN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIEFKSPKNLFVRYYLSTDTNKKVRLNTTQVSSISDFIWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFELRRAK R VFG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELRRAKTRAVFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKME-IERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCE 180
             ME IER VS+V GNNN CV KQPKLK+GMRVRVP EME  +KKIKR RKWKDECGCCE
Sbjct: 121 QNMEIIERWVSMVCGNNNGCVYKQPKLKVGMRVRVPEEME-TDKKIKRIRKWKDECGCCE 180

Query: 181 SSKVGDFCGDYDLFALAAAMEFM 202
           SSKVGDFC D++LFALAAAMEF+
Sbjct: 181 SSKVGDFCEDFELFALAAAMEFL 197

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BLAST of Clc01G18910.1 vs. NCBI nr
Match: XP_016899221.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103485345 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-75
Identity = 153/203 (75.37%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNIEF SPKNLFVRYYLS   N ++RLNT Q+SSISDFIWN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIEFKSPKNLFVRYYLSTDTNKKVRLNTTQVSSISDFIWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFEL   K    FG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELGGLKPELFFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKME-IERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCE 180
             ME IER VS+V GNNN CV KQPKLK+GMRVRVP EME  +KKIKR RKWKDECGCCE
Sbjct: 121 QNMEIIERWVSMVCGNNNGCVYKQPKLKVGMRVRVPEEME-TDKKIKRIRKWKDECGCCE 180

Query: 181 SSKVGDFCGDYDLFALAAAMEFM 202
           SSKVGDFC D++LFALAAAMEF+
Sbjct: 181 SSKVGDFCEDFELFALAAAMEFL 197

[Close]

BLAST of Clc01G18910.1 vs. NCBI nr
Match: XP_022978546.1 (uncharacterized protein LOC111478495 [Cucurbita maxima])

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-72
Identity = 150/205 (73.17%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M A QKL  F+CEIRIL+AKNIEF SPKNLFVRYYLSAGNN RIRLNT Q SS SDFIWN
Sbjct: 47  MGAAQKLCSFSCEIRILQAKNIEFISPKNLFVRYYLSAGNNKRIRLNTKQTSSNSDFIWN 106

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFG-RSSSQLLGRAEIPWSQVFE 120
           +SF LECLGS+DSI +L+Q+T+VFELRRAK + VFGRV G  SSSQLLGRAEIPW+QVFE
Sbjct: 107 ESFCLECLGSEDSIQSLKQATVVFELRRAKTQHVFGRVLGSSSSSQLLGRAEIPWNQVFE 166

Query: 121 SPKMEIERCVSLVSGNN---NECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGC 180
           SP M+I+R VSLVS NN    E  KQPKLK+GMRVRV AEME+  +K +R RKW DECGC
Sbjct: 167 SPNMDIDRWVSLVSSNNGSVREGFKQPKLKVGMRVRVAAEMEM--EKKRRLRKWSDECGC 226

Query: 181 CESSKVGDFCGDYDLFALAAAMEFM 202
              SKVG FCGD++ FALAAAMEF+
Sbjct: 227 --ESKVGHFCGDHEFFALAAAMEFL 247

[Close]

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL
Match: A0A0A0KK37 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500440 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 155/202 (76.73%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNI F SPKNLFVRYYLS   N +IRLNT Q+SSIS F+WN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIGFKSPKNLFVRYYLSTDPNKKIRLNTTQVSSISHFVWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFELRRAK R VFG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELRRAKTRAVFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKMEIERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCES 180
             MEIER VS+V GN N CV KQPKLK+GMRVRVP EME+++KKIKR RKWKDECGCCES
Sbjct: 121 QNMEIERWVSMVCGNKNGCVYKQPKLKVGMRVRVPEEMEMVDKKIKRIRKWKDECGCCES 180

Query: 181 SKVGDFCGDYDLFALAAAMEFM 202
           SKVGDFCGD++LFAL AAMEF+
Sbjct: 181 SKVGDFCGDFELFALTAAMEFL 197

[Close]

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL
Match: A0A5D3CNP4 (Putative Nitric oxide synthase-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002820 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.9e-79
Identity = 158/203 (77.83%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNIEF SPKNLFVRYYLS   N ++RLNT Q+SSISDFIWN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIEFKSPKNLFVRYYLSTDTNKKVRLNTTQVSSISDFIWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFELRRAK R VFG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELRRAKTRAVFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKME-IERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCE 180
             ME IER VS+V GNNN CV KQPKLK+GMRVRVP EME  +KKIKR RKWKDECGCCE
Sbjct: 121 QNMEIIERWVSMVCGNNNGCVYKQPKLKVGMRVRVPEEME-TDKKIKRIRKWKDECGCCE 180

Query: 181 SSKVGDFCGDYDLFALAAAMEFM 202
           SSKVGDFC D++LFALAAAMEF+
Sbjct: 181 SSKVGDFCEDFELFALAAAMEFL 197

[Close]

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL
Match: A0A1S4DTA4 (LOW QUALITY PROTEIN: uncharacterized protein LOC103485345 OS=Cucumis melo OX=3656 GN=LOC103485345 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75
Identity = 153/203 (75.37%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M ATQKLS FNCEIRI+EAKNIEF SPKNLFVRYYLS   N ++RLNT Q+SSISDFIWN
Sbjct: 1   MGATQKLSSFNCEIRIIEAKNIEFKSPKNLFVRYYLSTDTNKKVRLNTTQVSSISDFIWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFES 120
           QSF LECLGSQ+S+  LQQ+T+VFEL   K    FG     SSSQLLGRAEIPWS VFES
Sbjct: 61  QSFCLECLGSQESLQALQQATVVFELGGLKPELFFG-----SSSQLLGRAEIPWSDVFES 120

Query: 121 PKME-IERCVSLVSGNNNECV-KQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCE 180
             ME IER VS+V GNNN CV KQPKLK+GMRVRVP EME  +KKIKR RKWKDECGCCE
Sbjct: 121 QNMEIIERWVSMVCGNNNGCVYKQPKLKVGMRVRVPEEME-TDKKIKRIRKWKDECGCCE 180

Query: 181 SSKVGDFCGDYDLFALAAAMEFM 202
           SSKVGDFC D++LFALAAAMEF+
Sbjct: 181 SSKVGDFCEDFELFALAAAMEFL 197

[Close]

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL
Match: A0A6J1IMZ4 (uncharacterized protein LOC111478495 OS=Cucurbita maxima OX=3661 GN=LOC111478495 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.3e-73
Identity = 150/205 (73.17%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M A QKL  F+CEIRIL+AKNIEF SPKNLFVRYYLSAGNN RIRLNT Q SS SDFIWN
Sbjct: 47  MGAAQKLCSFSCEIRILQAKNIEFISPKNLFVRYYLSAGNNKRIRLNTKQTSSNSDFIWN 106

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFG-RSSSQLLGRAEIPWSQVFE 120
           +SF LECLGS+DSI +L+Q+T+VFELRRAK + VFGRV G  SSSQLLGRAEIPW+QVFE
Sbjct: 107 ESFCLECLGSEDSIQSLKQATVVFELRRAKTQHVFGRVLGSSSSSQLLGRAEIPWNQVFE 166

Query: 121 SPKMEIERCVSLVSGNN---NECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGC 180
           SP M+I+R VSLVS NN    E  KQPKLK+GMRVRV AEME+  +K +R RKW DECGC
Sbjct: 167 SPNMDIDRWVSLVSSNNGSVREGFKQPKLKVGMRVRVAAEMEM--EKKRRLRKWSDECGC 226

Query: 181 CESSKVGDFCGDYDLFALAAAMEFM 202
              SKVG FCGD++ FALAAAMEF+
Sbjct: 227 --ESKVGHFCGDHEFFALAAAMEFL 247

[Close]

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL
Match: A0A6J1GG04 (uncharacterized protein LOC111453594 OS=Cucurbita moschata OX=3662 GN=LOC111453594 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.9e-73
Identity = 149/205 (72.68%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEFTSPKNLFVRYYLSAGNNNRIRLNTAQISSISDFIWN 60
           M A QKL  F+CEIRIL+AKNIEF SPKNLFVRYYLSAGNN RIRLNT Q SS S+FIWN
Sbjct: 1   MGAAQKLCSFSCEIRILQAKNIEFISPKNLFVRYYLSAGNNKRIRLNTKQTSSNSEFIWN 60

Query: 61  QSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFG-RSSSQLLGRAEIPWSQVFE 120
           +SF LECLGS+DSI +L+Q+T+VFELRRAK + VFGR+FG  SSSQLLGRAEIPW+QVFE
Sbjct: 61  ESFCLECLGSEDSIQSLKQATVVFELRRAKTQHVFGRLFGSSSSSQLLGRAEIPWNQVFE 120

Query: 121 SPKMEIERCVSLVSGNN---NECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDECGC 180
           SP M+I+R VSLVS NN    E  KQPKLK+GMRVRV AEME+  +K +R RKW DECGC
Sbjct: 121 SPNMDIDRWVSLVSANNGSVREGFKQPKLKVGMRVRVAAEMEM--EKKRRLRKWSDECGC 180

Query: 181 CESSKVGDFCGDYDLFALAAAMEFM 202
              SKVG FCGD++ FALAAAMEF+
Sbjct: 181 --ESKVGHFCGDHEFFALAAAMEFL 201

[Close]

BLAST of Clc01G18910.1 vs. TAIR 10
Match: AT5G65030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-34
Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 5   QKLSFFNCEIRILEAKNIEFTS-PKNLFVRYYLSAGNNNRIRLNTAQISSISD-FIWNQS 64
           +KL    C++RI+EA+N+E  S    LFVR+YLSAG+N +I +NT ++SS SD  +W+QS
Sbjct: 6   KKLRSLKCQVRIVEARNVEIKSQASTLFVRFYLSAGHNRKIEVNTRELSSKSDQLMWDQS 65

Query: 65  FSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQVFESPK 124
           F LEC G + ++  L+Q  +VFELRR KI     +    S S+++GR E+ W  VFESP 
Sbjct: 66  FGLECQGDEAAVKELKQQRVVFELRRKKISTFLRK---SSKSEVVGRGEVSWESVFESPG 125

Query: 125 MEIERCVSLVSGNNNECVKQPK----LKMGMRVRVPAEMEIMNKKIKRTRKWKDECGCCE 184
           MEIER V  V G +   V + +    LK+ ++V+   EME M   IK  +K +  C  C 
Sbjct: 126 MEIERLV--VMGESKNWVLEDERPLLLKIALKVQALEEMEKM--LIKNDKKTEKLCCVCS 185

Query: 185 SSKVGD-FCGDYDLFALAAAME 200
           S   G   C DY+ FAL  A++
Sbjct: 186 SRDCGSCSCLDYEAFALVCALD 200

[Close]

BLAST of Clc01G18910.1 vs. TAIR 10
Match: AT5G10210.1 (CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-30
Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 0


Query: 1   MDATQKLSFFNCEIRILEAKNIEF-TSPKNLFVRYYLSAGNNNRIRLNTAQISSISD--- 60
           M   + +     E++I+EA+N+E  +SP  LFVR+YL AGNN++I LNT +I S SD   
Sbjct: 1   MGIVENIRSLKFEVKIVEARNVELKSSPTTLFVRFYLHAGNNSKIELNTPEIRSRSDCEV 60

Query: 61  FIWNQSFSLECLGSQDSIHTLQQSTIVFELRRAKIRPVFGRVFGRSSSQLLGRAEIPWSQ 120
             WNQSF LEC G++ ++  L+Q ++VFELRR K  P   +    S S+L+GR +I W  
Sbjct: 61  ISWNQSFGLECQGNETAVEELKQQSVVFELRRRKTTPFLKK---WSKSELVGRGKIFWKS 120

Query: 121 VFESPKMEIERCVSLVSGNNN---ECVKQPKLKMGMRVRVPAEMEIMNKKIKRTRKWKDE 180
           V E+  MEIER V +    ++   +C K   L + + ++V A       KI  T++ +D 
Sbjct: 121 VIETDGMEIERFVVMDETKDHVLEDCDKHKPLLLKIALKVQA------SKIVNTKRVEDL 180

Query: 181 CGCCESSKVGDFCGDYDLFALAAAM 199
           C C +       C DY+ F +A A+
Sbjct: 181 CECKDCRTCN--CVDYEAFVVACAL 194

The following BLAST results are available for this feature:

BLAST of Clc01G18910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882269.1	6.8e-83	82.09	uncharacterized protein LOC120073498 [Benincasa hispida]	[more]
XP_011657970.1	4.1e-80	76.73	uncharacterized protein LOC105435926 [Cucumis sativus] >KGN48752.1 hypothetical ...	[more]
KAA0036300.1	6.0e-79	77.83	putative Nitric oxide synthase-interacting protein [Cucumis melo var. makuwa] >T...	[more]
XP_016899221.1	4.0e-75	75.37	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103485345 [Cucumis me...	[more]
XP_022978546.1	1.1e-72	73.17	uncharacterized protein LOC111478495 [Cucurbita maxima]	[more]

BLAST of Clc01G18910.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G18910.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK37	2.0e-80	76.73	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500440 PE=4 SV=...	[more]
A0A5D3CNP4	2.9e-79	77.83	Putative Nitric oxide synthase-interacting protein OS=Cucumis melo var. makuwa O...	[more]
A0A1S4DTA4	1.9e-75	75.37	LOW QUALITY PROTEIN: uncharacterized protein LOC103485345 OS=Cucumis melo OX=365...	[more]
A0A6J1IMZ4	5.3e-73	73.17	uncharacterized protein LOC111478495 OS=Cucurbita maxima OX=3661 GN=LOC111478495...	[more]
A0A6J1GG04	6.9e-73	72.68	uncharacterized protein LOC111453594 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]

BLAST of Clc01G18910.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65030.1	6.3e-34	42.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G10210.1	9.3e-30	38.05	CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IP...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..201
None	No IPR available	PANTHER	PTHR35503:SF2	OSJNBA0006M15.15 PROTEIN	coord: 1..199
None	No IPR available	PANTHER	PTHR35503	OSJNBA0006M15.15 PROTEIN	coord: 1..199
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 1..153 e-value: 7.1E-8 score: 34.3
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 12..138
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..129 score: 10.20154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc01G18910	Clc01G18910	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G18910.1-exon	Clc01G18910.1-exon-ClcChr01:31351483..31352569	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G18910.1-three_prime_utr	Clc01G18910.1-three_prime_utr-ClcChr01:31351483..31351875	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G18910.1-cds	Clc01G18910.1-cds-ClcChr01:31351876..31352481	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G18910.1-five_prime_utr	Clc01G18910.1-five_prime_utr-ClcChr01:31352482..31352569	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc01G18910.1	Clc01G18910.1-protein	polypeptide