Clc01G03890.1 (mRNA) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGTTTGGACTCTGTTTAAGAGCTCCGTTGTACAGAGGTTAGAAATACTGTTAGCTCACTTGTACCAGCAAGCTGGGTCGCCGGTGAATGTGGGAGAGCATGGATTTTTGATGATTTTCAAGGTGGTTACAAGTATGTTGTGGGGTGGGTCAGTGGAAGGGGAACAGAGATATAGTGTTGCAGCAGAGTTTAGAGAGACAGTCTTAGAAATAACAGAGGTATTGGGCAAGCCTAATGTTTCAGACTTTTTTCTGATCTTGGCCAGGTTTGATCTCCAAGGGATTGAGAAGCAGATGCGTGAGCTTGCTTCCAGATTTGATAATATTTTCGAGAAGATGATTGATCAAGGATTGAAAATTGATGATGGAGAAGACGACGAGAGTGAAACATCAAGTTTACACAGCAGTTTAGTTCTATCTAATAAGTTTGTATATTTATACTCCTAA ATGCTAGTTTGGACTCTGTTTAAGAGCTCCGTTGTACAGAGGTTAGAAATACTGTTAGCTCACTTGTACCAGCAAGCTGGGTCGCCGGTGAATGTGGGAGAGCATGGATTTTTGATGATTTTCAAGGTGGTTACAAGTATGTTGTGGGGTGGGTCAGTGGAAGGGGAACAGAGATATAGTGTTGCAGCAGAGTTTAGAGAGACAGTCTTAGAAATAACAGAGGTATTGGGCAAGCCTAATGTTTCAGACTTTTTTCTGATCTTGGCCAGGTTTGATCTCCAAGGGATTGAGAAGCAGATGCGTGAGCTTGCTTCCAGATTTGATAATATTTTCGAGAAGATGATTGATCAAGGATTGAAAATTGATGATGGAGAAGACGACGAGAGTGAAACATCAAGTTTACACAGCAGTTTAGTTCTATCTAATAAGTTTGTATATTTATACTCCTAA ATGCTAGTTTGGACTCTGTTTAAGAGCTCCGTTGTACAGAGGTTAGAAATACTGTTAGCTCACTTGTACCAGCAAGCTGGGTCGCCGGTGAATGTGGGAGAGCATGGATTTTTGATGATTTTCAAGGTGGTTACAAGTATGTTGTGGGGTGGGTCAGTGGAAGGGGAACAGAGATATAGTGTTGCAGCAGAGTTTAGAGAGACAGTCTTAGAAATAACAGAGGTATTGGGCAAGCCTAATGTTTCAGACTTTTTTCTGATCTTGGCCAGGTTTGATCTCCAAGGGATTGAGAAGCAGATGCGTGAGCTTGCTTCCAGATTTGATAATATTTTCGAGAAGATGATTGATCAAGGATTGAAAATTGATGATGGAGAAGACGACGAGAGTGAAACATCAAGTTTACACAGCAGTTTAGTTCTATCTAATAAGTTTGTATATTTATACTCCTAA MLVWTLFKSSVVQRLEILLAHLYQQAGSPVNVGEHGFLMIFKVVTSMLWGGSVEGEQRYSVAAEFRETVLEITEVLGKPNVSDFFLILARFDLQGIEKQMRELASRFDNIFEKMIDQGLKIDDGEDDESETSSLHSSLVLSNKFVYLYS Homology
BLAST of Clc01G03890.1 vs. NCBI nr
Match: XP_038874643.1 (flavonoid 3'-monooxygenase CYP75B137-like [Benincasa hispida]) HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37 Identity = 86/109 (78.90%), Postives = 95/109 (87.16%), Query Frame = 0
BLAST of Clc01G03890.1 vs. NCBI nr
Match: XP_004147580.1 (flavonoid 3'-monooxygenase CYP75B137 [Cucumis sativus] >KGN50206.1 hypothetical protein Csa_000316 [Cucumis sativus]) HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37 Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. NCBI nr
Match: XP_008437138.1 (PREDICTED: flavonoid 3'-monooxygenase-like [Cucumis melo]) HSP 1 Score: 165.2 bits (417), Expect = 4.2e-37 Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. NCBI nr
Match: KAA0039674.1 (flavonoid 3'-monooxygenase-like [Cucumis melo var. makuwa]) HSP 1 Score: 163.3 bits (412), Expect = 1.6e-36 Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. NCBI nr
Match: XP_022970206.1 (geraniol 8-hydroxylase-like [Cucurbita maxima]) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34 Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy Swiss-Prot
Match: A0A4D6Q414 (Flavonoid 3',5'-hydroxylase CYP75B138 OS=Crocosmia x crocosmiiflora OX=1053288 GN=CYP75B138 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07 Identity = 33/116 (28.45%), Postives = 59/116 (50.86%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy Swiss-Prot
Match: A0A2K9RG08 (Labd-13Z-ene-9,15,16-triol synthase, chloroplastic OS=Vitex agnus-castus OX=54477 GN=CYP76BK1 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07 Identity = 32/111 (28.83%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy Swiss-Prot
Match: O64638 (Cytochrome P450 76C3 OS=Arabidopsis thaliana OX=3702 GN=CYP76C3 PE=2 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07 Identity = 30/120 (25.00%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy Swiss-Prot
Match: A0A068Q5V6 (Cytochrome P450 71AU50 OS=Prunus mume OX=102107 GN=CYP71AU50 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.2e-07 Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy Swiss-Prot
Match: P93149 (Licodione synthase OS=Glycyrrhiza echinata OX=46348 GN=CYP93B1 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 30/93 (32.26%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy TrEMBL
Match: A0A0A0KR55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G159600 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 7.0e-38 Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy TrEMBL
Match: A0A1S3ASY0 (flavonoid 3'-monooxygenase-like OS=Cucumis melo OX=3656 GN=LOC103482651 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.0e-37 Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy TrEMBL
Match: A0A5A7T876 (Flavonoid 3'-monooxygenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00040 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 7.7e-37 Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy TrEMBL
Match: A0A6J1I001 (geraniol 8-hydroxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111469168 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 5.5e-35 Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of Clc01G03890.1 vs. ExPASy TrEMBL
Match: A0A6J1HYH5 (geraniol 8-hydroxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111469169 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35 Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of Clc01G03890.1 vs. TAIR 10
Match: AT5G44620.1 (cytochrome P450, family 706, subfamily A, polypeptide 3 ) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-24 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Clc01G03890.1 vs. TAIR 10
Match: AT4G12320.1 (cytochrome P450, family 706, subfamily A, polypeptide 6 ) HSP 1 Score: 107.5 bits (267), Expect = 9.7e-24 Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Clc01G03890.1 vs. TAIR 10
Match: AT4G12330.1 (cytochrome P450, family 706, subfamily A, polypeptide 7 ) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of Clc01G03890.1 vs. TAIR 10
Match: AT4G12310.1 (cytochrome P450, family 706, subfamily A, polypeptide 5 ) HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Clc01G03890.1 vs. TAIR 10
Match: AT4G12300.1 (cytochrome P450, family 706, subfamily A, polypeptide 4 ) HSP 1 Score: 95.9 bits (237), Expect = 2.9e-20 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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