Clc01G02650.1 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc01G02650.1
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CCT domain-containing protein
Location	ClcChr01: 2347033 .. 2349358 (+)
Sequence length	1300
RNA-Seq Expression	Clc01G02650.1
Synteny	Clc01G02650.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTCTTGCCCTGCTTCTTCTGTTTAAATATCTCTTCCTTCTCCATACCTTTTCCTCTCAATTTCCTTAACACAAACACAGAGGAGAGAAAGAGAGAACCTAATTTCATCTTCCTTTTTCTTTCTTCTGGGTTTTGTTTGATTTTTAGAGATTTCGATTAAAACTAATTTAAAACTGAAAAAGAAAAAAGAAATAAGAAAAAAGAAAAAAAAAGAAACAACAGAGAGTGGAGGAGGAGCAAGAAGAAGAAGAGTTTTCATTTCCATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGGTTTTCATTATACTCCGTAATGCTCTGTTTTTCTTTTTCTTTAGTATTAAAGTTTGTGATTTAATTAATGTTTGAAGCAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGGTTAGAATTAGAAATGAATTAAAGAAGAGATTAATAGAAAGTGTCAAGAAGATTAATGGAAGTGAGTTTATGGTTTATGATAATAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGGTATAATTTTTCTTTTAATTTTAAATTTAATTTAATTTTTTTTAGGGATTTTTTTTCGGGATATTTCCACATCAGCTGTTTTAACAGCTGAGGTGGCAACAAAGAACTGAGATTCTCTCTTTGAATTTTTCAAATTTTGCCACCTCATCTCAATTTTAGGAACTTCAGATTTAAAATTTTGGGGAAAAAATCTGATTTCTAAATTTTAAATTTTCTTAACTTTTAAAATGAAGGCTTTGAGTTAATTTTCTTTTTTCTTTTTAAATCTAAACTTTGAAATTATCGATTTTAGTTCTAGAATTTAAAAAAAAAAAAAAGATTTTTGTTAAGTTACTTTTCTACTTTAATTTTATTATTTTTTTTTTCTGTTGAATGTCACTAATTTTATTTAGCATACTAAAATTCAGAATACACAATTATAGCCTAGCCAAGTCATTAATTTATTGAAATTAAAAATATCAAAATAGTTACTTTTAAATTGATAAAAAAAATTTATTATTATTTTTTACAAAAATGAAGTAACTAAAATAGACATTTTAAAAACTTGAGCACCAACATGCAAACAAACTCAAAAAGTTAGAATTCCAATTAAAATAGACATTTTGAAAGTTCAAATTCAAAGCCAAAGTAAGATTTAAACTTAAAAACCATTTTGCCATATTTCCATCCTTAACTAAAGTGATTAGCTATAATAATATCTTCCTTCGAGTTGATACGAATTTTCAAGAAAAATTATTATTTTTTAATGCAAACGAAAAATTTTTAGTTGGAAATACAAAATTCGTTTCACATTTTTTTTTTTTTTTTTTTTTTGTGTTCTTTCGAAAATTACATATTTATTTATTTACTTTTGAATGCAGATTGAAGGGTTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGATCATAACTTGAAGAAGAAGGAGGAAAAGAAAATGATGATG

mRNA sequence

TCTCCTTCTTGCCCTGCTTCTTCTGTTTAAATATCTCTTCCTTCTCCATACCTTTTCCTCTCAATTTCCTTAACACAAACACAGAGGAGAGAAAGAGAGAACCTAATTTCATCTTCCTTTTTCTTTCTTCTGGGTTTTGTTTGATTTTTAGAGATTTCGATTAAAACTAATTTAAAACTGAAAAAGAAAAAAGAAATAAGAAAAAAGAAAAAAAAAGAAACAACAGAGAGTGGAGGAGGAGCAAGAAGAAGAAGAGTTTTCATTTCCATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGGTTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGATCATAACTTGAAGAAGAAGGAGGAAAAGAAAATGATGATG

Coding sequence (CDS)

ATGTCTTCTGATCTGTTCATTCATGGCGATTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCTCTTCCGATGTGGTTTTCCCTTCTGATGCAGACCTTCAATTCTTCTCCGATCCTTATTCCCCAAATTTCTCAGATTCTGCCATTGATATTCTTACTTCTATTCCTTCTCAAGAAAACCCACTCCTCGATGAATTCAATTCAAATTCCATCGACCATTTCATTCCGATGCAGGGCTTATCTCTCTCTCATCCCACCGATTTCCATCTCCTCCCTCATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAACCTCTCCAATTTCGATGTCAAAAGCGAAGATTCCCATCTGGGTTTCACCTCAAATTCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTCTGAAAATGCTGCTGCCACCACCGTCGTCGTCGACAAATCCCTGCTCCTCCACAGAAGCTTCAGTGAAAAACCCAGCTTCCAATCTCGCCTCGAATCCCTTCTAATGGGATCCCAAAATTTCCCCAATAATCATCAGTCCCTCCCCTGCCCTGAATCTGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGCGATTTACAGAATTCTGGGATGGGGAGGACGACGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGGATATCGAAATACAGAGCGAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGGTTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCATTATTGTGGATTTTGA

Protein sequence

MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQENPLLDEFNSNSIDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNFDVKSEDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGKQYGEVYGRMQFHYCGF

Homology

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BLAST of Clc01G02650.1 vs. NCBI nr
Match: XP_038874875.1 (uncharacterized protein LOC120067375 [Benincasa hispida])

HSP 1 Score: 574.7 bits (1480), Expect = 5.1e-160
Identity = 300/332 (90.36%), Postives = 306/332 (92.17%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQEN 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDA+LQFFSD YSPNFSDSA+DIL SIPSQEN
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDAELQFFSDHYSPNFSDSAVDILNSIPSQEN 60

Query: 61  PLLDEFNSNSIDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNFDVKSEDSHLGFT 120
           PL D FNSNSIDHFIPMQGLSLSHPTDFHLL HPSSSSSNGFQNLSNFDVKSE+S LG  
Sbjct: 61  PLPDGFNSNSIDHFIPMQGLSLSHPTDFHLLSHPSSSSSNGFQNLSNFDVKSEESLLG-- 120

Query: 121 SNSSFNQPLCFEPPSENA--AATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQNFPNN 180
               FNQPLCF+PPSENA  A  T VVDKSLLLHRSFSEKP FQSRLESLLM S NFPNN
Sbjct: 121 ----FNQPLCFDPPSENAATATATAVVDKSLLLHRSFSEKPGFQSRLESLLMESPNFPNN 180

Query: 181 HQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEERKERI 240
           H SLPCPESDFFSSQIRRVFSTGDLQNSGMGR  ENGSSLMEEGNFKVGRYSAEERKERI
Sbjct: 181 HHSLPCPESDFFSSQIRRVFSTGDLQNSGMGR-MENGSSLMEEGNFKVGRYSAEERKERI 240

Query: 241 SKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFW 300
            KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFW
Sbjct: 241 LKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFW 300

Query: 301 IEGLHAGEEEGTMRGKQYGEVYGRMQFHYCGF 331
           IEGLH GEEEGTMRGKQ+GEVYGRMQF YCGF
Sbjct: 301 IEGLHGGEEEGTMRGKQFGEVYGRMQFQYCGF 325

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BLAST of Clc01G02650.1 vs. NCBI nr
Match: XP_011654732.1 (two-component response regulator-like APRR5 [Cucumis sativus] >KAE8647851.1 hypothetical protein Csa_000322 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 3.0e-144
Identity = 284/339 (83.78%), Postives = 299/339 (88.20%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPS--- 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPS+ADLQFFSDPYSPNFSDSAIDIL SIPS   
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSEADLQFFSDPYSPNFSDSAIDILNSIPSQSQ 60

Query: 61  QENPLLDEFNSN----SIDHFIPMQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKS 120
           QENPLLDEFNSN    S+D+FIPMQGLSLSHPT DF LLP+PS SSSNGFQNL+NFDVK+
Sbjct: 61  QENPLLDEFNSNNNSISVDNFIPMQGLSLSHPTPDFPLLPNPSPSSSNGFQNLTNFDVKN 120

Query: 121 EDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGS 180
           E+S LGF      N PLCF+PP EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM S
Sbjct: 121 EESLLGFN-----NPPLCFDPP-EN-------VDKSLLLHRSFSEKPNFQTRLETFLMES 180

Query: 181 QNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAE 240
           QNFPNNH SLPCPESDFFSSQIRRVFSTGDLQNSG GR+    SSLMEEGNFKVGRYSAE
Sbjct: 181 QNFPNNHHSLPCPESDFFSSQIRRVFSTGDLQNSGNGRS----SSLMEEGNFKVGRYSAE 240

Query: 241 ERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300
           ERKERI KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE
Sbjct: 241 ERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300

Query: 301 DEDDFWIEGLHAGEEEGTMR-GKQYGEVYGRMQFHYCGF 331
           DEDDFWIEGLH  EEEGT+R GKQYGE+YGRMQF YCGF
Sbjct: 301 DEDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 322

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BLAST of Clc01G02650.1 vs. NCBI nr
Match: XP_008437312.1 (PREDICTED: uncharacterized protein LOC103482769 isoform X2 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 3.3e-143
Identity = 283/338 (83.73%), Postives = 294/338 (86.98%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPS--- 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDADLQFFSDPYSPNFSDSAIDIL SIPS   
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDILNSIPSQSQ 60

Query: 61  QENPLLDEFNSN---SIDHFIPMQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKSE 120
           QENPL DEFNSN   SID+FIPMQGLSLSHPT DFHLLP+PS SSSNGFQNL+NFDVK+E
Sbjct: 61  QENPLPDEFNSNNSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNE 120

Query: 121 DSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQ 180
           +S LGF      N PLC   P EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM SQ
Sbjct: 121 ESLLGFN-----NPPLCSLDPPEN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQ 180

Query: 181 NFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEE 240
            FPNNH SLPCPESDFFSSQIRRVFSTGDLQNSG GR     SSLMEEGNFKVGRYSAEE
Sbjct: 181 KFPNNHHSLPCPESDFFSSQIRRVFSTGDLQNSGNGR-----SSLMEEGNFKVGRYSAEE 240

Query: 241 RKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED 300
           RKERI KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED
Sbjct: 241 RKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED 300

Query: 301 EDDFWIEGLHAGEEEGTMR-GKQYGEVYGRMQFHYCGF 331
           EDDFWIEGLH  EEEGT+R GKQYGE+YGRMQF YCGF
Sbjct: 301 EDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 321

[Close]

BLAST of Clc01G02650.1 vs. NCBI nr
Match: XP_008437311.1 (PREDICTED: uncharacterized protein LOC103482769 isoform X1 [Cucumis melo])

HSP 1 Score: 514.2 bits (1323), Expect = 8.2e-142
Identity = 283/339 (83.48%), Postives = 294/339 (86.73%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPS--- 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDADLQFFSDPYSPNFSDSAIDIL SIPS   
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDILNSIPSQSQ 60

Query: 61  QENPLLDEFNSN---SIDHFIPMQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKSE 120
           QENPL DEFNSN   SID+FIPMQGLSLSHPT DFHLLP+PS SSSNGFQNL+NFDVK+E
Sbjct: 61  QENPLPDEFNSNNSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNE 120

Query: 121 DSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQ 180
           +S LGF      N PLC   P EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM SQ
Sbjct: 121 ESLLGFN-----NPPLCSLDPPEN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQ 180

Query: 181 NFPNNHQSLPCPESDFFSSQIRRVFSTGDL-QNSGMGRTTENGSSLMEEGNFKVGRYSAE 240
            FPNNH SLPCPESDFFSSQIRRVFSTGDL QNSG GR     SSLMEEGNFKVGRYSAE
Sbjct: 181 KFPNNHHSLPCPESDFFSSQIRRVFSTGDLQQNSGNGR-----SSLMEEGNFKVGRYSAE 240

Query: 241 ERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300
           ERKERI KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE
Sbjct: 241 ERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300

Query: 301 DEDDFWIEGLHAGEEEGTMR-GKQYGEVYGRMQFHYCGF 331
           DEDDFWIEGLH  EEEGT+R GKQYGE+YGRMQF YCGF
Sbjct: 301 DEDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 322

[Close]

BLAST of Clc01G02650.1 vs. NCBI nr
Match: KAG7016981.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.9 bits (1169), Expect = 5.9e-124
Identity = 262/345 (75.94%), Postives = 274/345 (79.42%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQEN 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDA+LQFFSDPYSPNFSDSAID+L       N
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDAELQFFSDPYSPNFSDSAIDVL-------N 60

Query: 61  PLLDEFNSNS------------IDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNF 120
           PL +EFNSNS            +D FIPMQGLSLSH  DF LL  PSSSSSNGFQNLSNF
Sbjct: 61  PLAEEFNSNSNSNPNLNQNPNPLDQFIPMQGLSLSHGNDFPLLADPSSSSSNGFQNLSNF 120

Query: 121 DVKSEDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSF---QSRL 180
            + S          +SFNQPLCF+ P ENAAA     DKS  LHRSFSEKP F   QSRL
Sbjct: 121 HLNS----------NSFNQPLCFD-PIENAAA---AADKS-FLHRSFSEKPGFLGGQSRL 180

Query: 181 ESLLMGSQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFK 240
           ESLLM S NFPN  QSLPCPESDFFSSQIRRVFS GDLQNSG GR +ENGSSLMEEGNFK
Sbjct: 181 ESLLMDSPNFPN--QSLPCPESDFFSSQIRRVFSAGDLQNSGRGR-SENGSSLMEEGNFK 240

Query: 241 VGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA 300
           VGRYSAEERKERISKYRAKRTQRN+NKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA
Sbjct: 241 VGRYSAEERKERISKYRAKRTQRNYNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA 300

Query: 301 ACSTREEDEDDFWIEGLHAGEEEGTMRGKQYGEVYGRMQFHYCGF 331
           ACSTREEDEDDFWIE            GK+YGEVYG+MQF YCGF
Sbjct: 301 ACSTREEDEDDFWIE------------GKEYGEVYGQMQFQYCGF 308

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BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.0e-06
Identity = 56/170 (32.94%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 111 KSEDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRL-ESLL 170
           K   S  G +S  S    +  EP  E      V +D +     +F    SF + L  S+ 
Sbjct: 151 KDCSSSHGKSSEGSHEFAVPGEPVPERQGFGAVSMDITDYDASNFRRGYSFGASLGHSVS 210

Query: 171 MGSQNFPNNHQSLP-CPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGR 230
           M S     N  ++P C   D  +S +R   ST DL  +  G       S+M    F    
Sbjct: 211 MSSL---ENMSTVPDCGVPDITTSYLRSSKSTIDLFTAAAGSPVA-AHSIMSPPQF---- 270

Query: 231 YSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 279
             A +R+ R+ +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +
Sbjct: 271 MGAIDREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

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BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.0e-06
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 230 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 289
           S  +R+ R+ +YR K+  R F KTI+YA RK  A+ RPRI+GRFA+  +  E    A ST
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFST 341

[Close]

BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 6.8e-06
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 230 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 279
           S+ +R+ R+ +YR KR  R F KTI+YA RK  A++RPRI+GRFA+  E
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329

[Close]

BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.8e-06
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 230 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGE 282
           ++ ER+ R+ +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +  E
Sbjct: 291 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 342

[Close]

BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 31/72 (43.06%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 230 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 289
           S  ER+ R+ +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +          +
Sbjct: 225 SPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD----------S 284

Query: 290 REEDEDDFWIEG 302
           RE D  D  + G
Sbjct: 285 RENDGGDVGVYG 286

[Close]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL
Match: A0A1S3AUB2 (uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.6e-143
Identity = 283/338 (83.73%), Postives = 294/338 (86.98%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPS--- 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDADLQFFSDPYSPNFSDSAIDIL SIPS   
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDILNSIPSQSQ 60

Query: 61  QENPLLDEFNSN---SIDHFIPMQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKSE 120
           QENPL DEFNSN   SID+FIPMQGLSLSHPT DFHLLP+PS SSSNGFQNL+NFDVK+E
Sbjct: 61  QENPLPDEFNSNNSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNE 120

Query: 121 DSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQ 180
           +S LGF      N PLC   P EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM SQ
Sbjct: 121 ESLLGFN-----NPPLCSLDPPEN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQ 180

Query: 181 NFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEE 240
            FPNNH SLPCPESDFFSSQIRRVFSTGDLQNSG GR     SSLMEEGNFKVGRYSAEE
Sbjct: 181 KFPNNHHSLPCPESDFFSSQIRRVFSTGDLQNSGNGR-----SSLMEEGNFKVGRYSAEE 240

Query: 241 RKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED 300
           RKERI KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED
Sbjct: 241 RKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREED 300

Query: 301 EDDFWIEGLHAGEEEGTMR-GKQYGEVYGRMQFHYCGF 331
           EDDFWIEGLH  EEEGT+R GKQYGE+YGRMQF YCGF
Sbjct: 301 EDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 321

[Close]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL
Match: A0A1S3ATQ3 (uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.0e-142
Identity = 283/339 (83.48%), Postives = 294/339 (86.73%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPS--- 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDADLQFFSDPYSPNFSDSAIDIL SIPS   
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDILNSIPSQSQ 60

Query: 61  QENPLLDEFNSN---SIDHFIPMQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKSE 120
           QENPL DEFNSN   SID+FIPMQGLSLSHPT DFHLLP+PS SSSNGFQNL+NFDVK+E
Sbjct: 61  QENPLPDEFNSNNSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNE 120

Query: 121 DSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQ 180
           +S LGF      N PLC   P EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM SQ
Sbjct: 121 ESLLGFN-----NPPLCSLDPPEN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQ 180

Query: 181 NFPNNHQSLPCPESDFFSSQIRRVFSTGDL-QNSGMGRTTENGSSLMEEGNFKVGRYSAE 240
            FPNNH SLPCPESDFFSSQIRRVFSTGDL QNSG GR     SSLMEEGNFKVGRYSAE
Sbjct: 181 KFPNNHHSLPCPESDFFSSQIRRVFSTGDLQQNSGNGR-----SSLMEEGNFKVGRYSAE 240

Query: 241 ERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300
           ERKERI KYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE
Sbjct: 241 ERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREE 300

Query: 301 DEDDFWIEGLHAGEEEGTMR-GKQYGEVYGRMQFHYCGF 331
           DEDDFWIEGLH  EEEGT+R GKQYGE+YGRMQF YCGF
Sbjct: 301 DEDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 322

[Close]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL
Match: A0A6J1EQ84 (putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=LOC111435633 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.8e-124
Identity = 262/345 (75.94%), Postives = 274/345 (79.42%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQEN 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDA+LQFFSDPYSPNFSDSAID+L       N
Sbjct: 55  MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDAELQFFSDPYSPNFSDSAIDVL-------N 114

Query: 61  PLLDEFNSNS------------IDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNF 120
           PL +EFNSNS            +D FIPMQGLSLSH  DF LL  PSSSSSNGFQNLSNF
Sbjct: 115 PLAEEFNSNSNSNPNLNQNPNPLDQFIPMQGLSLSHGNDFPLLADPSSSSSNGFQNLSNF 174

Query: 121 DVKSEDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSF---QSRL 180
            + S          +SFNQPLCF+ P ENAAA     DKS  LHRSFSEKP F   QSRL
Sbjct: 175 HLNS----------NSFNQPLCFD-PIENAAA---AADKS-FLHRSFSEKPGFLGGQSRL 234

Query: 181 ESLLMGSQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFK 240
           ESLLM S NFPN  QSLPCPESDFFSSQIRRVFS GDLQNSG GR +ENGSSLMEEGNFK
Sbjct: 235 ESLLMDSPNFPN--QSLPCPESDFFSSQIRRVFSAGDLQNSGRGR-SENGSSLMEEGNFK 294

Query: 241 VGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA 300
           VGRYSAEERKERISKYRAKRTQRN+NKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA
Sbjct: 295 VGRYSAEERKERISKYRAKRTQRNYNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA 354

Query: 301 ACSTREEDEDDFWIEGLHAGEEEGTMRGKQYGEVYGRMQFHYCGF 331
           ACSTREEDEDDFWIE            GK+YGEVYG+MQF YCGF
Sbjct: 355 ACSTREEDEDDFWIE------------GKEYGEVYGQMQFQYCGF 362

[Close]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL
Match: A0A6J1I1T9 (putative zinc finger protein CONSTANS-LIKE 11 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469074 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 8.3e-124
Identity = 261/341 (76.54%), Postives = 273/341 (80.06%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQEN 60
           MSSDLFIHGDSSSSSSLFRCSSSD+VFPSDA+LQFFSDPYSPNFSDSAID+L        
Sbjct: 1   MSSDLFIHGDSSSSSSLFRCSSSDLVFPSDAELQFFSDPYSPNFSDSAIDVL-------K 60

Query: 61  PLLDEFNSNS--------IDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNFDVKS 120
           PL +EFNSNS        +D FIPMQGLSLSH  DF LL  PSSSSSNGFQNLSNF + S
Sbjct: 61  PLAEEFNSNSNLNPNPNPLDQFIPMQGLSLSHGNDFPLLADPSSSSSNGFQNLSNFHLNS 120

Query: 121 EDSHLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSF---QSRLESLL 180
                     +SFNQPLCF+ P+ENAAA     DKS  LHRSFSEKP F   QSRLESLL
Sbjct: 121 ----------NSFNQPLCFD-PTENAAA-----DKS-FLHRSFSEKPGFLGGQSRLESLL 180

Query: 181 MGSQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRY 240
           M S NFPN  QSLPCPESDFFSSQIRRVFS GDLQNSG GR +ENGSSLMEEGNFKVGRY
Sbjct: 181 MDSPNFPN--QSLPCPESDFFSSQIRRVFSAGDLQNSGRGR-SENGSSLMEEGNFKVGRY 240

Query: 241 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 300
           SAEERKERISKYRAKRTQRN+NKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACS+
Sbjct: 241 SAEERKERISKYRAKRTQRNYNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSS 300

Query: 301 REEDEDDFWIEGLHAGEEEGTMRGKQYGEVYGRMQFHYCGF 331
           REEDEDDFWIE            GKQYGEVYG MQF YCGF
Sbjct: 301 REEDEDDFWIE------------GKQYGEVYGHMQFQYCGF 302

[Close]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL
Match: A0A0A0KNV6 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152920 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 4.1e-107
Identity = 213/256 (83.20%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 77  MQGLSLSHPT-DFHLLPHPSSSSSNGFQNLSNFDVKSEDSHLGFTSNSSFNQPLCFEPPS 136
           MQGLSLSHPT DF LLP+PS SSSNGFQNL+NFDVK+E+S LGF      N PLCF+PP 
Sbjct: 1   MQGLSLSHPTPDFPLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCFDPP- 60

Query: 137 ENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQNFPNNHQSLPCPESDFFSSQIR 196
           EN       VDKSLLLHRSFSEKP+FQ+RLE+ LM SQNFPNNH SLPCPESDFFSSQIR
Sbjct: 61  EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQNFPNNHHSLPCPESDFFSSQIR 120

Query: 197 RVFSTGDLQNSGMGRTTENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIK 256
           RVFSTGDLQNSG GR+    SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIK
Sbjct: 121 RVFSTGDLQNSGNGRS----SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIK 180

Query: 257 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GK 316
           YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GK
Sbjct: 181 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGK 239

Query: 317 QYGEVYGRMQFHYCGF 331
           QYGE+YGRMQF YCGF
Sbjct: 241 QYGEMYGRMQFQYCGF 239

[Close]

BLAST of Clc01G02650.1 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-39
Identity = 139/319 (43.57%), Postives = 175/319 (54.86%), Query Frame = 0


Query: 2   SSDLFI-HGDSSSSSSLFRCSSSDVVFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQEN 61
           S+D +I  G SSSSSS+FR SS D +F SD      +D +  N           + S E 
Sbjct: 4   STDFYIFDGSSSSSSSVFRNSSPD-MFSSDTTTT--TDLFCNN----------ELYSVEE 63

Query: 62  PLLDEFNSNSIDHFIPMQGLSLSHPTDFHLLPHPSSSSSNG-FQNLSNFD----VKSEDS 121
            L      N  DHF P   LS S P+D       S     G + N S+F     VK+E  
Sbjct: 64  SL------NIFDHFTPQHILSSSPPSDLLGTLSLSQHIPTGLYPNFSDFQISDAVKTEKF 123

Query: 122 HLGFTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFS----EKPSFQSRLESLLMG 181
             G    ++             A + + + +    + RSFS    E    Q      +M 
Sbjct: 124 FDGHNQAATM------------ARSYSTIENSGRYMQRSFSSNSVEGKQTQVPFNIPMMD 183

Query: 182 SQNFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNS-GMGRTTENGS-SLMEEGNFKVGRY 241
           S N   ++ +L  PE+ FFSSQ+RRV+STGDLQN+  M R++EN +    EE NFKVGRY
Sbjct: 184 SSNL--SYNNLSSPENAFFSSQMRRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRY 243

Query: 242 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 301
           SAEERKE+ISKYRAKR QRNF KTIKYACRKTLAD+RPRIRGRFARNDE  EIP      
Sbjct: 244 SAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEIPNI---- 284

Query: 302 REEDEDDFW-IEGLHAGEE 308
            E+D+ + W ++GLH  EE
Sbjct: 304 -EDDDSELWKLDGLHEKEE 284

[Close]

BLAST of Clc01G02650.1 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.9e-36
Identity = 130/324 (40.12%), Postives = 161/324 (49.69%), Query Frame = 0


Query: 1   MSSDLFIHGDSSSSSSLFRCSSSDV-VFPSDADLQFFSDPYSPNFSDSAIDILTSIPSQE 60
           M SDL+I   SSSSSS+  C S+D  +F SD              + +  D+  + P   
Sbjct: 1   MDSDLYIFDGSSSSSSI--CHSTDPDMFSSD--------------TTTTTDLYCNNP-YL 60

Query: 61  NPLLDEFNSNS-IDHFIPMQGLSLSHPTDFHLLPHPSSSSSNGFQNLSNFDVKSEDSHLG 120
           NP +D+  S S  + F P     LS       L   + + +N F N S F    E+    
Sbjct: 61  NPSMDDHQSLSFFESFTPTTHHILSSSPPISQLQTLTLTHTNSFPNFSGF----ENFDTV 120

Query: 121 FTSNSSFNQPLCFEPPSENAAATTVVVDKSLLLHRSFSEKPSFQSRLESLLMGSQNFPNN 180
            T    FN P  F+ P                                  +  S NF  N
Sbjct: 121 KTEQLLFNSP--FDAP---------------------------------FMEDSSNF-QN 180

Query: 181 HQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSLM-------------EEGNFK 240
              L  PE  FFS  +RRV+STGDLQN G   T +   S               +E + +
Sbjct: 181 QNLLNSPEDSFFSDHMRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLR 240

Query: 241 VGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKA 300
           VGRYS+EERKE+ISKYRAKRTQRNF KTIKYACRKTLADNRPR+RGRFARNDE  E PK 
Sbjct: 241 VGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKI 267

Query: 301 ACS-TREEDEDDFW-IEGLHAGEE 308
           A S TR+E++DD W ++GLH  EE
Sbjct: 301 ASSFTRQENDDDLWNLDGLHEEEE 267

[Close]

BLAST of Clc01G02650.1 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-20
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 225 KVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPK 284
           KVG+ SAE+RKE+I +Y  KR +RNF+K IKYACRKTLAD+RPR+RGRFA+NDE GE  +
Sbjct: 279 KVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNR 338

Query: 285 AACSTREEDEDD 297
            ACS+  ED+DD
Sbjct: 339 QACSSHHEDDDD 350

[Close]

BLAST of Clc01G02650.1 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-20
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 184 CPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSL----------------MEEGNF-KV 243
           CP+S      I+R+F+  DLQ + +G   EN S L                +E+    KV
Sbjct: 251 CPDS------IKRMFNPEDLQKA-LGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKV 310

Query: 244 GRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAA 297
           G+ S E+RKE+I +Y  KR +RNFNK IKYACRKTLAD+RPR+RGRFA+NDE GE  + A
Sbjct: 311 GKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQA 370

[Close]

BLAST of Clc01G02650.1 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-20
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 184 CPESDFFSSQIRRVFSTGDLQNSGMGRTTENGSSL----------------MEEGNF-KV 243
           CP+S      I+R+F+  DLQ  G G   EN S L                +E+    KV
Sbjct: 251 CPDS------IKRMFNPEDLQALGGG--AENQSHLVTPQAHPALGPVDINGLEDSTLNKV 310

Query: 244 GRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAA 297
           G+ S E+RKE+I +Y  KR +RNFNK IKYACRKTLAD+RPR+RGRFA+NDE GE  + A
Sbjct: 311 GKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQA 370

The following BLAST results are available for this feature:

BLAST of Clc01G02650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874875.1	5.1e-160	90.36	uncharacterized protein LOC120067375 [Benincasa hispida]	[more]
XP_011654732.1	3.0e-144	83.78	two-component response regulator-like APRR5 [Cucumis sativus] >KAE8647851.1 hypo...	[more]
XP_008437312.1	3.3e-143	83.73	PREDICTED: uncharacterized protein LOC103482769 isoform X2 [Cucumis melo]	[more]
XP_008437311.1	8.2e-142	83.48	PREDICTED: uncharacterized protein LOC103482769 isoform X1 [Cucumis melo]	[more]
KAG7016981.1	5.9e-124	75.94	Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc01G02650.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82117	3.0e-06	32.94	Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=...	[more]
O50055	3.0e-06	46.67	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9FHH8	6.8e-06	53.06	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
Q940T9	8.8e-06	50.00	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	2.6e-05	43.06	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]

BLAST of Clc01G02650.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUB2	1.6e-143	83.73	uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3ATQ3	4.0e-142	83.48	uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EQ84	2.8e-124	75.94	putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I1T9	8.3e-124	76.54	putative zinc finger protein CONSTANS-LIKE 11 isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A0A0KNV6	4.1e-107	83.20	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152920 PE=4 SV...	[more]

BLAST of Clc01G02650.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41380.1	1.3e-39	43.57	CCT motif family protein	[more]
AT1G63820.1	4.9e-36	40.12	CCT motif family protein	[more]
AT1G04500.1	1.7e-20	66.67	CCT motif family protein	[more]
AT2G33350.1	2.9e-20	46.92	CCT motif family protein	[more]
AT2G33350.2	4.9e-20	47.69	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 234..276 e-value: 9.5E-18 score: 64.0
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 234..276 score: 15.487286
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 30..327
None	No IPR available	PANTHER	PTHR31319:SF46	CCT MOTIF FAMILY PROTEIN	coord: 30..327

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc01G02650	Clc01G02650	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G02650.1-exon	Clc01G02650.1-exon-ClcChr01:2347033..2347911	exon
Clc01G02650.1-exon	Clc01G02650.1-exon-ClcChr01:2347992..2348144	exon
Clc01G02650.1-exon	Clc01G02650.1-exon-ClcChr01:2348231..2348359	exon
Clc01G02650.1-exon	Clc01G02650.1-exon-ClcChr01:2349220..2349358	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G02650.1-five_prime_utr	Clc01G02650.1-five_prime_utr-ClcChr01:2347033..2347299	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G02650.1-cds	Clc01G02650.1-cds-ClcChr01:2347300..2347911	CDS
Clc01G02650.1-cds	Clc01G02650.1-cds-ClcChr01:2347992..2348144	CDS
Clc01G02650.1-cds	Clc01G02650.1-cds-ClcChr01:2348231..2348359	CDS
Clc01G02650.1-cds	Clc01G02650.1-cds-ClcChr01:2349220..2349318	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc01G02650.1-three_prime_utr	Clc01G02650.1-three_prime_utr-ClcChr01:2349319..2349358	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc01G02650.1	Clc01G02650.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding