Cla97C11G217040.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C11G217040.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 20456691 .. 20456927 (+)
Sequence length237
RNA-Seq ExpressionCla97C11G217040.1
SyntenyCla97C11G217040.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGAACCAGCAAGGAAGGAAGGTGGGAAGAAAATACAGAGTTAATGCCCATGAAAAATCGCTCAATCAGCTCAAACCCACAACCCAACAACACAACAACAATAGCAAGAAACAGTCACTGGATAGCTCTGTCAATCAACGCAGAAGAATTCCGAGAAGAATCTGGTCATTTTCCTCATTAGAAAGAGGACAAAGAGGAGGAAGACAAGAGAAGAAAAATGGCGATTATTGA

mRNA sequence

ATGATGAAGAACCAGCAAGGAAGGAAGGTGGGAAGAAAATACAGAGTTAATGCCCATGAAAAATCGCTCAATCAGCTCAAACCCACAACCCAACAACACAACAACAATAGCAAGAAACAGTCACTGGATAGCTCTGTCAATCAACGCAGAAGAATTCCGAGAAGAATCTGGTCATTTTCCTCATTAGAAAGAGGACAAAGAGGAGGAAGACAAGAGAAGAAAAATGGCGATTATTGA

Coding sequence (CDS)

ATGATGAAGAACCAGCAAGGAAGGAAGGTGGGAAGAAAATACAGAGTTAATGCCCATGAAAAATCGCTCAATCAGCTCAAACCCACAACCCAACAACACAACAACAATAGCAAGAAACAGTCACTGGATAGCTCTGTCAATCAACGCAGAAGAATTCCGAGAAGAATCTGGTCATTTTCCTCATTAGAAAGAGGACAAAGAGGAGGAAGACAAGAGAAGAAAAATGGCGATTATTGA

Protein sequence

MMKNQQGRKVGRKYRVNAHEKSLNQLKPTTQQHNNNSKKQSLDSSVNQRRRIPRRIWSFSSLERGQRGGRQEKKNGDY
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C11G217040.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G217040.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G217040.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G217040.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C11G217040Cla97C11G217040gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C11G217040.1-exonCla97C11G217040.1-exon-Cla97Chr11:20456691..20456927exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C11G217040.1-cdsCla97C11G217040.1-cds-Cla97Chr11:20456691..20456927CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C11G217040.1Cla97C11G217040.1-proteinpolypeptide