Cla97C10G202710.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C10G202710.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr10: 32557955 .. 32558306 (+)
Sequence length222
RNA-Seq ExpressionCla97C10G202710.1
SyntenyCla97C10G202710.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAGAAAATCAACTCTTCCACAGGTGAAGTTTTTAGGAAGTATTTTGACAATAACTTTGGGAAAGAAAGCATAAAAAGGGAGAAAATAATGATAAAAAACGGGAAGGGAAAAAAAGCCCTAGTCTCCATTTCTTCTTTTTGTTAAAATGAAAGTTACCTTCTCTGTTTTCCCCCACCAATTCTCCTTCTTCTTCGAATTTTCCACCGCCAGCCTCACTCTTCTTCAAGTTTGCTCCGGTGAGCAGTCAAGTGGTTCAACGGTCGACAAGTAGTGGTCTGATTCCTCTAAACAGCGACGGTGTGACGACACATGCAGGTAAGAAAGGGATATCGAAAACATATCCTTAA

mRNA sequence

ATGCCAAGAAAATCAACTCTTCCACAGTTACCTTCTCTGTTTTCCCCCACCAATTCTCCTTCTTCTTCGAATTTTCCACCGCCAGCCTCACTCTTCTTCAAGTTTGCTCCGGTGAGCAGTCAAGTGGTTCAACGGTCGACAAGTAGTGGTCTGATTCCTCTAAACAGCGACGGTGTGACGACACATGCAGGTAAGAAAGGGATATCGAAAACATATCCTTAA

Coding sequence (CDS)

ATGCCAAGAAAATCAACTCTTCCACAGTTACCTTCTCTGTTTTCCCCCACCAATTCTCCTTCTTCTTCGAATTTTCCACCGCCAGCCTCACTCTTCTTCAAGTTTGCTCCGGTGAGCAGTCAAGTGGTTCAACGGTCGACAAGTAGTGGTCTGATTCCTCTAAACAGCGACGGTGTGACGACACATGCAGGTAAGAAAGGGATATCGAAAACATATCCTTAA

Protein sequence

MPRKSTLPQLPSLFSPTNSPSSSNFPPPASLFFKFAPVSSQVVQRSTSSGLIPLNSDGVTTHAGKKGISKTYP
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C10G202710.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G202710.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G202710.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G202710.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..73

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C10G202710Cla97C10G202710gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G202710.1-exonCla97C10G202710.1-exon-Cla97Chr10:32557955..32557981exon
Cla97C10G202710.1-exonCla97C10G202710.1-exon-Cla97Chr10:32558112..32558306exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G202710.1-cdsCla97C10G202710.1-cds-Cla97Chr10:32557955..32557981CDS
Cla97C10G202710.1-cdsCla97C10G202710.1-cds-Cla97Chr10:32558112..32558306CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C10G202710.1Cla97C10G202710.1-proteinpolypeptide