Cla97C10G202035.1 (mRNA) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGGCAGAAATTCTATCCTATGATCTCAAAGGCATCAATGTTGAAGAAGCTTCGGCTGTGGGGTGCAACATTTGATGATAGTAATGAAGATGCGGATTTGGACTCAATTTCCATCTCTTTCCCAAGTTAAGCTATTTAACTTTGCGTTATTATTTAAGACATGGAACCTTTCATAATAACTTGCAGAAATCGTTTCAGATGGAGAACGGATGGTGCGACGTTAGTGATCACTTCTCTAACTGGGTAGCGAAACTTCTTGAAAGATGTCCTAAGTTGAAGAAATTGATCATTCGTGGGGTTGTATCAGACTTATACCCACAAGCAATGCCAAACCTTAGCACACTTTACCACATCCATCGTTGA ATGGTGTGGCAGAAATTCTATCCTATGATCTCAAAGGCATCAATGTTGAAGAAGCTTCGGCTGTGGGGTGCAACATTTGATGATATTAAGCTATTTAACTTTGCACATGGAACCTTTCATAATAACTTGCAGAAATCGTTTCAGATGGAGAACGGATGGTGCGACGTTAGTGATCACTTCTCTAACTGGGTAGCGAAACTTCTTGAAAGATGTCCTAAGTTGAAGAAATTGATCATTCGTGGGGTTGTATCAGACTTATACCCACAAGCAATGCCAAACCTTAGCACACTTTACCACATCCATCGTTGA ATGGTGTGGCAGAAATTCTATCCTATGATCTCAAAGGCATCAATGTTGAAGAAGCTTCGGCTGTGGGGTGCAACATTTGATGATATTAAGCTATTTAACTTTGCACATGGAACCTTTCATAATAACTTGCAGAAATCGTTTCAGATGGAGAACGGATGGTGCGACGTTAGTGATCACTTCTCTAACTGGGTAGCGAAACTTCTTGAAAGATGTCCTAAGTTGAAGAAATTGATCATTCGTGGGGTTGTATCAGACTTATACCCACAAGCAATGCCAAACCTTAGCACACTTTACCACATCCATCGTTGA MVWQKFYPMISKASMLKKLRLWGATFDDIKLFNFAHGTFHNNLQKSFQMENGWCDVSDHFSNWVAKLLERCPKLKKLIIRGVVSDLYPQAMPNLSTLYHIHR Homology
BLAST of Cla97C10G202035.1 vs. NCBI nr
Match: XP_022144792.1 (F-box/LRR-repeat protein At1g67190-like [Momordica charantia] >XP_022144793.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia] >XP_022144794.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia]) HSP 1 Score: 95.1 bits (235), Expect = 3.7e-16 Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. NCBI nr
Match: CAB4287182.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 91.3 bits (225), Expect = 5.3e-15 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. NCBI nr
Match: TXG73618.1 (hypothetical protein EZV62_002197 [Acer yangbiense]) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-14 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. NCBI nr
Match: KAB2631748.1 (F-box/LRR-repeat protein [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 88.6 bits (218), Expect = 3.4e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. NCBI nr
Match: XP_008389342.1 (F-box/LRR-repeat protein At1g67190-like isoform X2 [Malus domestica]) HSP 1 Score: 88.6 bits (218), Expect = 3.4e-14 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy Swiss-Prot
Match: Q9ZW88 (F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana OX=3702 GN=At1g67190 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.0e-16 Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy TrEMBL
Match: A0A6J1CTB9 (F-box/LRR-repeat protein At1g67190-like OS=Momordica charantia OX=3673 GN=LOC111014389 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.8e-16 Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy TrEMBL
Match: A0A6J5VG72 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45063 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.6e-15 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy TrEMBL
Match: A0A5C7IWY3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002197 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy TrEMBL
Match: A0A6P4AQM1 (F-box/LRR-repeat protein At1g67190 OS=Ziziphus jujuba OX=326968 GN=LOC107432221 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14 Identity = 50/111 (45.05%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. ExPASy TrEMBL
Match: A0A2G9HH26 (F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10536 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14 Identity = 48/111 (43.24%), Postives = 60/111 (54.05%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. TAIR 10
Match: AT1G67190.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-17 Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Cla97C10G202035.1 vs. TAIR 10
Match: AT1G67190.2 (F-box/RNI-like superfamily protein ) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-17 Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|