Cla97C09G178436.1 (mRNA) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTCTGTGGTGTTGTTGCTACTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTTCAAAATGGCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAACTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTACAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATTGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATAAAAAAGATGTTTTGATTCATAAGTGGGAATAA ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTCTGTGGTGTTGTTGCTACTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTTCAAAATGGCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAACTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTACAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATTGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATAAAAAAGATGTTTTGATTCATAAGTGGGAATAA ATGATGAAGCAAATGGAAATGAGGCGTATGAAAAAGCAGTCTGTGGTGTTGTTGCTACTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTTCAAAATGGCAGATCCATGTTGTGAACCGGCTAAGCAATGGCCAAATCCTGTTGGTGCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAACTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACCTACAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATTGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATAAAAAAGATGTTTTGATTCATAAGTGGGAATAA MMKQMEMRRMKKQSVVLLLLLCLAVLEETKAAELSKWQIHVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNKKDVLIHKWE Homology
BLAST of Cla97C09G178436.1 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 264.6 bits (675), Expect = 5.1e-67 Identity = 120/144 (83.33%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 244.2 bits (622), Expect = 7.1e-61 Identity = 113/149 (75.84%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. NCBI nr
Match: XP_038896421.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51 Identity = 105/148 (70.95%), Postives = 116/148 (78.38%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 208.4 bits (529), Expect = 4.3e-50 Identity = 94/149 (63.09%), Postives = 116/149 (77.85%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. NCBI nr
Match: KAE8646231.1 (hypothetical protein Csa_023825, partial [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 7.3e-50 Identity = 90/116 (77.59%), Postives = 99/116 (85.34%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.5e-25 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13 Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.3e-12 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.1e-50 Identity = 94/149 (63.09%), Postives = 116/149 (77.85%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48 Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 5.3e-46 Identity = 87/143 (60.84%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 4.5e-45 Identity = 83/144 (57.64%), Postives = 111/144 (77.08%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38 Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 114.8 bits (286), Expect = 6.0e-26 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13 Identity = 35/116 (30.17%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Cla97C09G178436.1 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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