Cla97C09G178180.1 (mRNA) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGTATGTTTTTTACCTATTTATTTATGTTTAAACGGTTGAGCTATATTCAAGTTGAGTTTTGTTTGATTTAGTATTTTGGGTGTTGTGAATATATTTATTTGCAGGAGGGCCCCTTGTGATGGCGCCACCGCAATACGCCGCCCCGCCGCCCAAAAAAAACCAGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTATTTGTTGATAAACTCTAGCTTTGTTGAATGGCTTTGGTTTCTGCTTGCATATATCAAAACCAGGCTTCCAGGAACGGCATCTAGACGCTACAAACTTTAGACTACATCTTTGCTTTTCCTTGTATGTTTCTTAGTCTATGGCTAACAGAGGGTTTAATTTTGTGTTTTCAGCCTTACAGCTCTGTGTTGCTGCTGTCTTGATCTTGATGAGTGTTGCTGTGACGGCCCTTCCATTATCTGTATTACTTCATCTAACCTTTGCTTGCCTTTGTAGCTCTAAATTGGCTTTTTTACTTCATCATACAAAATTCAAGACTTGTTTTTCCTTCCTTGGGAGTGGTTTGATTTTGTGTGAGCTACAAGTCCATCCTAAGGTTTTATACTTTTCTTTAGACATCCAATTTGAAAGAAGAAGGTACAAGTGA ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGCCCCTTGTGATGGCGCCACCGCAATACGCCGCCCCGCCGCCCAAAAAAAACCAGGCTTCTTGGAGGGATGCCTTACAGCTCTGTGTTGCTGCTGTCTTGATCTTGATGAGTGTTGCTGTGACGGCCCTTCCATTATCTGTATTACTTCATCTAACCTTTGCTTGCCTTTGTAGCTCTAAATTGGCTTTTTTACTTCATCATACAAAATTCAAGACTTGTTTTTCCTTCCTTGGGAGTGGTTTGATTTTGTGTGAGCTACAAGTCCATCCTAAGGTTTTATACTTTTCTTTAGACATCCAATTTGAAAGAAGAAGGTACAAGTGA ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGCCCCTTGTGATGGCGCCACCGCAATACGCCGCCCCGCCGCCCAAAAAAAACCAGGCTTCTTGGAGGGATGCCTTACAGCTCTGTGTTGCTGCTGTCTTGATCTTGATGAGTGTTGCTGTGACGGCCCTTCCATTATCTGTATTACTTCATCTAACCTTTGCTTGCCTTTGTAGCTCTAAATTGGCTTTTTTACTTCATCATACAAAATTCAAGACTTGTTTTTCCTTCCTTGGGAGTGGTTTGATTTTGTGTGAGCTACAAGTCCATCCTAAGGTTTTATACTTTTCTTTAGACATCCAATTTGAAAGAAGAAGGTACAAGTGA MSDPKYAYPYPPPQGGPLVMAPPQYAAPPPKKNQASWRDALQLCVAAVLILMSVAVTALPLSVLLHLTFACLCSSKLAFLLHHTKFKTCFSFLGSGLILCELQVHPKVLYFSLDIQFERRRYK Homology
BLAST of Cla97C09G178180.1 vs. NCBI nr
Match: KGN43811.1 (hypothetical protein Csa_017361 [Cucumis sativus]) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-07 Identity = 47/69 (68.12%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Cla97C09G178180.1 vs. NCBI nr
Match: KAA0031406.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06857.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-05 Identity = 55/114 (48.25%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of Cla97C09G178180.1 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04 Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of Cla97C09G178180.1 vs. NCBI nr
Match: KAG8497388.1 (hypothetical protein CXB51_008632 [Gossypium anomalum]) HSP 1 Score: 54.3 bits (129), Expect = 8.6e-04 Identity = 39/59 (66.10%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Cla97C09G178180.1 vs. ExPASy TrEMBL
Match: A0A0A0K7L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069130 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07 Identity = 47/69 (68.12%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Cla97C09G178180.1 vs. ExPASy TrEMBL
Match: A0A5A7SN04 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001610 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 9.9e-06 Identity = 55/114 (48.25%), Postives = 61/114 (53.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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