Cla97C09G174460.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C09G174460.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Protein Ycf2
Location	Cla97Chr09: 11389970 .. 11390329 (-)
Sequence length	360
RNA-Seq Expression	Cla97C09G174460.1
Synteny	Cla97C09G174460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAATCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATATATTCATTGATAAGTGGTGTCTTCAAATTTTCTCTTTAA

mRNA sequence

ATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAATCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATATATTCATTGATAAGTGGTGTCTTCAAATTTTCTCTTTAA

Coding sequence (CDS)

ATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAATCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATATATTCATTGATAAGTGGTGTCTTCAAATTTTCTCTTTAA

Protein sequence

MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLISGVFKFSL

Homology

[Close]

BLAST of Cla97C09G174460.1 vs. NCBI nr
Match: YP_009468904.1 (hypothetical chloroplast RF2 [Gynostemma compressum] >YP_009468924.1 hypothetical chloroplast RF2 [Gynostemma compressum] >AVA29805.1 hypothetical chloroplast RF2 [Gynostemma compressum] >AVA29806.1 hypothetical chloroplast RF2 [Gynostemma compressum])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1375 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1434

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1435 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1485

[Close]

BLAST of Cla97C09G174460.1 vs. NCBI nr
Match: YP_009752370.1 (Ycf2 protein [Bryonia marmorata] >YP_009752388.1 Ycf2 protein [Bryonia marmorata] >QIT04344.1 Ycf2 protein [Bryonia marmorata] >QIT04362.1 Ycf2 protein [Bryonia marmorata])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1378 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1437

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1438 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1488

[Close]

BLAST of Cla97C09G174460.1 vs. NCBI nr
Match: QJR53001.1 (hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical protein RF2 [Herpetospermum pedunculosum])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1380 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1439

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1440 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1490

[Close]

BLAST of Cla97C09G174460.1 vs. NCBI nr
Match: YP_010131137.1 (hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75785.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75802.1 hypothetical protein RF2 [Benincasa hispida] >QSQ72354.1 Ycf2 protein [Benincasa hispida] >QSQ72372.1 Ycf2 protein [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1378 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1437

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1438 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1488

[Close]

BLAST of Cla97C09G174460.1 vs. NCBI nr
Match: YP_009752033.1 (Ycf2 protein [Cionosicys macranthus] >YP_009752051.1 Ycf2 protein [Cionosicys macranthus] >QIT05274.1 Ycf2 protein [Cionosicys macranthus] >QIT05292.1 Ycf2 protein [Cionosicys macranthus])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1376 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1435

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1436 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1486

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot
Match: B1NWJ3 (Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEE+ GSASGGNMLWGGGPA
Sbjct: 1373 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDFLEEMRGSASGGNMLWGGGPA 1432

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKK WNINLIDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1433 YGVKSIRSKKKFWNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1483

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.1e-54
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI GSASGGNMLWGGGPA
Sbjct: 1381 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGGPA 1440

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKK +NINLIDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1441 YGVKSIRSKKKFFNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1491

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-53
Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI GSASGGNMLWGGGPA
Sbjct: 1378 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDLLEEIRGSASGGNMLWGGGPA 1437

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKK  NINLIDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1438 YGVKSIRSKKKFLNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1488

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 102/111 (91.89%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYM+ELRKLLDRYPTSELNSFWLKNLFLVALE+LGDSLEEI GSASGGNMLWGGGPA
Sbjct: 1377 MIPSYMMELRKLLDRYPTSELNSFWLKNLFLVALEKLGDSLEEIRGSASGGNMLWGGGPA 1436

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YG KSIRSKKK WNINLIDLISIIPNPI+RI FS+ TRHLSHTSKEIYSLI
Sbjct: 1437 YGFKSIRSKKKYWNINLIDLISIIPNPIHRITFSKKTRHLSHTSKEIYSLI 1487

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot
Match: Q589A6 (Protein Ycf2 OS=Silene latifolia OX=37657 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            M PSYMIELRKLLDRYPTSE N FWLKNLFLVALEQLGDSLEEIWGSASGGNM  GGGPA
Sbjct: 1319 MTPSYMIELRKLLDRYPTSESNFFWLKNLFLVALEQLGDSLEEIWGSASGGNMPLGGGPA 1378

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRS KKD+NINLIDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1379 YGVKSIRSNKKDFNINLIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1429

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1376 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1435

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1436 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1486

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL
Match: A0A6H0ET42 (Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1375 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1434

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1435 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1485

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL
Match: A0A6H0EV63 (Protein Ycf2 OS=Corallocarpus boehmii OX=386154 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1386 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1445

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1446 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1496

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL
Match: A0A6M3RUH1 (Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1378 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1437

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1438 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1488

[Close]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL
Match: A0A6H0ESM3 (Protein Ycf2 OS=Trichosanthes tubiflora OX=1144424 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA
Sbjct: 1378 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 1437

Query: 61   YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI
Sbjct: 1438 YGVKSIRSKKKDWNINLIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 1488

[Close]

BLAST of Cla97C09G174460.1 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 194.1 bits (492), Expect = 6.3e-50
Identity = 102/114 (89.47%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI G  SGGNMLWGG PA
Sbjct: 1390 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGDPA 1449

Query: 61   YGVKSIRSKKKDWNIN---LIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKD  IN   +IDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1450 YGVKSIRSKKKDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1501

[Close]

BLAST of Cla97C09G174460.1 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 194.1 bits (492), Expect = 6.3e-50
Identity = 102/114 (89.47%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1    MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPA 60
            MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGD LEEI G  SGGNMLWGG PA
Sbjct: 1390 MIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGDPA 1449

Query: 61   YGVKSIRSKKKDWNIN---LIDLISIIPNPINRIAFSRNTRHLSHTSKEIYSLI 112
            YGVKSIRSKKKD  IN   +IDLISIIPNPINRI FSRNTRHLSHTSKEIYSLI
Sbjct: 1450 YGVKSIRSKKKDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKEIYSLI 1501

The following BLAST results are available for this feature:

BLAST of Cla97C09G174460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009468904.1	7.2e-56	100.00	hypothetical chloroplast RF2 [Gynostemma compressum] >YP_009468924.1 hypothetica...	[more]
YP_009752370.1	7.2e-56	100.00	Ycf2 protein [Bryonia marmorata] >YP_009752388.1 Ycf2 protein [Bryonia marmorata...	[more]
QJR53001.1	7.2e-56	100.00	hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical ...	[more]
YP_010131137.1	7.2e-56	100.00	hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protei...	[more]
YP_009752033.1	7.2e-56	100.00	Ycf2 protein [Cionosicys macranthus] >YP_009752051.1 Ycf2 protein [Cionosicys ma...	[more]

BLAST of Cla97C09G174460.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1NWJ3	1.4e-54	95.50	Protein Ycf2 OS=Manihot esculenta OX=3983 GN=ycf2 PE=3 SV=1	[more]
A4GYV4	9.1e-54	95.50	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]
Q14F97	2.0e-53	95.50	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
Q49KT6	1.3e-52	91.89	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
Q589A6	2.9e-52	92.79	Protein Ycf2 OS=Silene latifolia OX=37657 GN=ycf2 PE=3 SV=1	[more]

BLAST of Cla97C09G174460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A343F2F1	3.5e-56	100.00	Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ET42	3.5e-56	100.00	Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1	[more]
A0A6H0EV63	3.5e-56	100.00	Protein Ycf2 OS=Corallocarpus boehmii OX=386154 GN=ycf2 PE=3 SV=1	[more]
A0A6M3RUH1	3.5e-56	100.00	Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ESM3	3.5e-56	100.00	Protein Ycf2 OS=Trichosanthes tubiflora OX=1144424 GN=ycf2 PE=3 SV=1	[more]

BLAST of Cla97C09G174460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	6.3e-50	89.47	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	6.3e-50	89.47	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 1..104 e-value: 1.3E-59 score: 201.6
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 1..112
None	No IPR available	PANTHER	PTHR33078:SF26	PROTEIN YCF2	coord: 1..112

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C09G174460	Cla97C09G174460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G174460.1-exon	Cla97C09G174460.1-exon-Cla97Chr09:11389970..11390329	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C09G174460.1-cds	Cla97C09G174460.1-cds-Cla97Chr09:11389970..11390329	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C09G174460.1	Cla97C09G174460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity