Cla97C09G168980.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C09G168980.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 5277871 .. 5278601 (-)
Sequence length252
RNA-Seq ExpressionCla97C09G168980.1
SyntenyCla97C09G168980.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCAGAGTGAAAGTAACAGAACACAGAAGCAGAGGCAGAAGGGCAGAAGAGAGCAGATTTTTGAAATGTGAGGGAAAAAGAAAAAGGAGGAAAAAAGTTAAAGGAAAAGGAAAAAAGAGGTCAAAGAGACGAATCTGTTTCTGTGAAAAAGTGGGTTTTGTGGTTTGTCAATTTGCAGACAGATTTATTGGTTGATGATGCCCACACGTTCTTCCTCTTCTTCTTCATTTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATACTTTTTACATTTATTTATTTCATTTATTTTTATTTTATTTTTTAGTCATTATACCTTTCTTTTATCCTCTCTAAAAGATACATATGAATATGCATTAATATTATTGTTTATTAGGTTAAGTTGTAAGTTTAGGTATTCCCTTTTCCTTTAGTTTGGTTTAGTTATTCAACTTTGAATCTTGTGTTTATTTAACTTTTTGGTATGATTTTGAGCTTATGGTTTTGGTTTCAAGAAGGATTGAACGAAGAAGAATGCAAGAAGAAGAAGAAAAAAATCAATTTTGACCCTAGTAAGATTCAATTTTGCTAATTTGGCCACTAATAATCAAAACATATTCTCATTACTATTGTAGATGAGAATCTCATAACGAAGACCTCGGATGGATTATGTTTGATTTTAGAGTTAGGGCACTCTACTTCATTTGCCTTATTCATTTCAGTCTTTCGAAGAAATTGA

mRNA sequence

ATGAGGCAGAGTGAAAGTAACAGAACACAGAAGCAGAGGCAGAAGGGCAGAAGAGAGCAGATTTTTGAAATCTTATGGTTTTGGTTTCAAGAAGGATTGAACGAAGAAGAATGCAAGAAGAAGAAGAAAAAAATCAATTTTGACCCTAATGAGAATCTCATAACGAAGACCTCGGATGGATTATGTTTGATTTTAGAGTTAGGGCACTCTACTTCATTTGCCTTATTCATTTCAGTCTTTCGAAGAAATTGA

Coding sequence (CDS)

ATGAGGCAGAGTGAAAGTAACAGAACACAGAAGCAGAGGCAGAAGGGCAGAAGAGAGCAGATTTTTGAAATCTTATGGTTTTGGTTTCAAGAAGGATTGAACGAAGAAGAATGCAAGAAGAAGAAGAAAAAAATCAATTTTGACCCTAATGAGAATCTCATAACGAAGACCTCGGATGGATTATGTTTGATTTTAGAGTTAGGGCACTCTACTTCATTTGCCTTATTCATTTCAGTCTTTCGAAGAAATTGA

Protein sequence

MRQSESNRTQKQRQKGRREQIFEILWFWFQEGLNEEECKKKKKKINFDPNENLITKTSDGLCLILELGHSTSFALFISVFRRN
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C09G168980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168980.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C09G168980Cla97C09G168980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G168980.1-exonCla97C09G168980.1-exon-Cla97Chr09:5277871..5277974exon
Cla97C09G168980.1-exonCla97C09G168980.1-exon-Cla97Chr09:5278038..5278114exon
Cla97C09G168980.1-exonCla97C09G168980.1-exon-Cla97Chr09:5278531..5278601exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G168980.1-cdsCla97C09G168980.1-cds-Cla97Chr09:5277871..5277974CDS
Cla97C09G168980.1-cdsCla97C09G168980.1-cds-Cla97Chr09:5278038..5278114CDS
Cla97C09G168980.1-cdsCla97C09G168980.1-cds-Cla97Chr09:5278531..5278601CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C09G168980.1Cla97C09G168980.1-proteinpolypeptide