Cla97C09G168400.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C09G168400.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 4850054 .. 4851196 (-)
Sequence length351
RNA-Seq ExpressionCla97C09G168400.1
SyntenyCla97C09G168400.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGCCTTTGCTTTTCAAGAAAGATGCTGGATTTCTGGAGTCAAAATTGGGAGTAGTGATGAAGAAGTTCTGGAGGCTCTTACCCATGGAGACACTACTTTCTTAGAAGGAATGGGTAACTGTTTTAAAAGGAGGAGGAATTGAAACTCGGGTCAATGGTGTTATTGATGCTGAATGAGGATTACAGAACAGAGAAGCATTATTTGATTATGGCAAAGCCACAAAGGGAAAAACGATGTAGGAAATGAAAGTAGATTCCAAACCAGGGGACATTTTGTTCAAGCGCGATTTAGATGTCGTATAAGCAGGCATCAAAAGGGGTGGTCAAGGAGAGGCTTTGTGGTTGCCAAGTCTTACTGTAGTGTAATCTTAGATGACCTGAGATTTCAACAGATTATGGAAAGGATGTTGAGCCACAAGAGGGTTATGTGGTTATTCTTACGGTAGAAATGTGGCAGCGAAGGGAAAAACGAAAAGGGTACATCAAAAGAAGCTGCACACCTTTTTTTATACTTCAAACGGAAAAACCACCCTGAACGATGGGGTTAGTTGCAATCCCACCTATGAACTTTTAATTTTACCAACTATGTTCTTTGGTTAAATTAACTTTAATCTATATAACTTATTATAAGGAGGGCAAAATTGTCCTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGCGTGAGGGTTTTTAAAGCCGCATGAACTAAATAAAGGACTTCTGCTTTTCTTATGACTTTCTTCCTTTTCTTTGTGTGATTCGAACAGACGTTCTAAATGTTTTGGTGAAGAATTGAAACTGCATTTGTTCTCTCGCAGTCATGGCTTTGTCTTTTCTCATACCCACTTGCCATAATCGCGTAAGTTTTCTTCCTTCTCTAACTTCAACTCTATAATCCTAATCCATTTTCTAATTTTCCCAATCACTCTCTTGGGTTTCTTCAGTTATTCTGTTAATTGTACTTGTAACATACAATTTGATTCTTGGATGGAATGTTTCAACAATCGGACTCCCATTTTTTCTTCCTCTGTTTTGCAGTTTGAATCCTCAATACCCGAAGGAGGAAGACAAGTTTCCCCTTCTGTCCATGAAATATGTTAATATAATAAAAGGGAGTCATTACAGCAATTAA

mRNA sequence

ATGCTAGCCTTTGCTTTTCAAGAAAGATGCTGGATTTCTGGAGTCAAAATTGGGAGTAGTGATGAAGAAGTTCTGGAGGCTCTTACCCATGGAGACACTACTTTCTTAGAAGGAATGGATGACCTGAGATTTCAACAGATTATGGAAAGGATGTTGAGCCACAAGAGGGTTATGTGGTTATTCTTACGAATTGAAACTGCATTTGTTCTCTCGCAGTCATGGCTTTGTCTTTTCTCATACCCACTTGCCATAATCGCTTTGAATCCTCAATACCCGAAGGAGGAAGACAAGTTTCCCCTTCTGTCCATGAAATATGTTAATATAATAAAAGGGAGTCATTACAGCAATTAA

Coding sequence (CDS)

ATGCTAGCCTTTGCTTTTCAAGAAAGATGCTGGATTTCTGGAGTCAAAATTGGGAGTAGTGATGAAGAAGTTCTGGAGGCTCTTACCCATGGAGACACTACTTTCTTAGAAGGAATGGATGACCTGAGATTTCAACAGATTATGGAAAGGATGTTGAGCCACAAGAGGGTTATGTGGTTATTCTTACGAATTGAAACTGCATTTGTTCTCTCGCAGTCATGGCTTTGTCTTTTCTCATACCCACTTGCCATAATCGCTTTGAATCCTCAATACCCGAAGGAGGAAGACAAGTTTCCCCTTCTGTCCATGAAATATGTTAATATAATAAAAGGGAGTCATTACAGCAATTAA

Protein sequence

MLAFAFQERCWISGVKIGSSDEEVLEALTHGDTTFLEGMDDLRFQQIMERMLSHKRVMWLFLRIETAFVLSQSWLCLFSYPLAIIALNPQYPKEEDKFPLLSMKYVNIIKGSHYSN
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C09G168400.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168400.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168400.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168400.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C09G168400Cla97C09G168400gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G168400.1-exonCla97C09G168400.1-exon-Cla97Chr09:4850054..4850147exon
Cla97C09G168400.1-exonCla97C09G168400.1-exon-Cla97Chr09:4850327..4850395exon
Cla97C09G168400.1-exonCla97C09G168400.1-exon-Cla97Chr09:4850751..4850820exon
Cla97C09G168400.1-exonCla97C09G168400.1-exon-Cla97Chr09:4851079..4851196exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C09G168400.1-cdsCla97C09G168400.1-cds-Cla97Chr09:4850054..4850147CDS
Cla97C09G168400.1-cdsCla97C09G168400.1-cds-Cla97Chr09:4850327..4850395CDS
Cla97C09G168400.1-cdsCla97C09G168400.1-cds-Cla97Chr09:4850751..4850820CDS
Cla97C09G168400.1-cdsCla97C09G168400.1-cds-Cla97Chr09:4851079..4851196CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C09G168400.1Cla97C09G168400.1-proteinpolypeptide