Cla97C08G158090.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C08G158090.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr08: 25548230 .. 25548586 (+)
Sequence length	357
RNA-Seq Expression	Cla97C08G158090.1
Synteny	Cla97C08G158090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAACAGAGTATTTATGGAAAAATAATTCAATTATCGAATGTGAAAATCTTACTTATTTACTGTATAAATCTCCGCCTAATTTCAACAATGGGAATGGGGATGATTCAACAACGCCTTCCACTAGGGTTAATCAATGGGGAGTCCACATTCCGAGGAGGAGGAGGTCTTGCAGCGTCGAATCGAAGCCTGAAGATGACGGAGGAAATGGAGTCAGCCACGATTATGATCCCCATCGCCAATGCTGCATTCTGCAAAAGGAAGAGGAAGAAATCCAGGGGAAAGGAAATAGAGTTGGTGAAGAGTCCGCCGGAGATGCCGGCGGCGGACTCTTTTCCATGCCCAAATTTTAA

mRNA sequence

ATGGGAAGAACAGAGTATTTATGGAAAAATAATTCAATTATCGAATGTGAAAATCTTACTTATTTACTGTATAAATCTCCGCCTAATTTCAACAATGGGAATGGGGATGATTCAACAACGCCTTCCACTAGGGTTAATCAATGGGGAGTCCACATTCCGAGGAGGAGGAGGTCTTGCAGCGTCGAATCGAAGCCTGAAGATGACGGAGGAAATGGAGTCAGCCACGATTATGATCCCCATCGCCAATGCTGCATTCTGCAAAAGGAAGAGGAAGAAATCCAGGGGAAAGGAAATAGAGTTGGTGAAGAGTCCGCCGGAGATGCCGGCGGCGGACTCTTTTCCATGCCCAAATTTTAA

Coding sequence (CDS)

ATGGGAAGAACAGAGTATTTATGGAAAAATAATTCAATTATCGAATGTGAAAATCTTACTTATTTACTGTATAAATCTCCGCCTAATTTCAACAATGGGAATGGGGATGATTCAACAACGCCTTCCACTAGGGTTAATCAATGGGGAGTCCACATTCCGAGGAGGAGGAGGTCTTGCAGCGTCGAATCGAAGCCTGAAGATGACGGAGGAAATGGAGTCAGCCACGATTATGATCCCCATCGCCAATGCTGCATTCTGCAAAAGGAAGAGGAAGAAATCCAGGGGAAAGGAAATAGAGTTGGTGAAGAGTCCGCCGGAGATGCCGGCGGCGGACTCTTTTCCATGCCCAAATTTTAA

Protein sequence

MGRTEYLWKNNSIIECENLTYLLYKSPPNFNNGNGDDSTTPSTRVNQWGVHIPRRRRSCSVESKPEDDGGNGVSHDYDPHRQCCILQKEEEEIQGKGNRVGEESAGDAGGGLFSMPKF

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C08G158090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C08G158090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C08G158090.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C08G158090.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C08G158090	Cla97C08G158090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C08G158090.1-exon	Cla97C08G158090.1-exon-Cla97Chr08:25548230..25548586	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C08G158090.1-cds	Cla97C08G158090.1-cds-Cla97Chr08:25548230..25548586	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C08G158090.1	Cla97C08G158090.1-protein	polypeptide