Cla97C08G148890.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C08G148890.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 17184719 .. 17186838 (-)
Sequence length261
RNA-Seq ExpressionCla97C08G148890.1
SyntenyCla97C08G148890.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGACGACGATGCCTCATGCCCGTTTCCCTTAACGCTGCACAGCTTGACTGCACAGAGAGGAGTCCTTCTCTTTCGTAGTTCGCTTGTAGCCTGTAGTGCACGTCCAACTGATTCCGTTCGACCGTTTGATTTCGTTGATCGGCCATCCACATCTAGAAAGTCTCCACAGTCCAAAGTAAGTTTTTTTTTTCAAGTTTTTTTAACTATTTCAAGTTTTATTTGAGTTTTTAAATTCAAAGTTATGGTTTTTTTTTTTAATTAAGTTTTTGCTTTATTTTTTGGTTAATTATTTTATGCATTTTATAAAGTTATAACTTTTAAGTTTAAAGTTTTGATTTTTTTGGTTTTGTTTGTGTGAATGTAAAAAGTTTATATTATGATTTTTGTGTAGGATGAATATGGAAATGGAAAAGTAAAAAAACTATCAATACAATAGAGAAGATTCTGATGAGGCAACCGTCAATGTTAATGAAGATAAAGAAATCCGTGAGAAAGGTGTAAGAAGAATAAAACATCCTATAGTTTGGGAACATTTTGAGTGTTTGAATGGTGATCCAAATAACCCTTATGCTAGGTGTAAATATTATGGAGCTACTTATGCATGTAATTCAAAGCGTAATGGTACGGGGACGATGAAAAATCACTTGGATAATGGTAAGAAATACCCATACTAAAGGAAGAGAGATCCAACTCAAAAGACCTTAGCTTTCAAACCTAAAGAAGAAGGTATTAAGGATGGTCATTCCCAACTTGTATGCGAATCATTTAGTTTAGAAAGTTGTCGTGAGGCTTTGGCTAAAATGATAATCATAGATGAATTGTTGAGAATAAAGGGTTTAAGAGATTTGTCAGTAAATTAACATGTTCCCAAGAGCCTAAGTTTGACATTCCATCTCATTTCACCATGGCTAGGGATATCGTGAAGATGTATGTTAATGAAAAACAAAAATTGAAAGATATGTTTGGGAAAATGAAATATAAAATTTGCCTCACTATTGATTGTTGGACTTTAGGACAGAATATGAACTATATGGTATTGATTGCACATTTTTTTTATCCTGATTAGAAGCTACATAAAAAATTCTTAGCTTTGGGGTTATTGAAAATCATAGAGGGGACACTATTGGTAGGGCTATGGAAAAGATTTTGAAAGATTGGGGAATTAAAAAGGTCATGGCTGTTGATAATGTTAGTTCAAATGATACTGCTATTGCTTTCATGATTAGGAGATTCACTGAAGGGTTGATATGTAATGGTGAGTATTGCATGTTAGATGTCGTACATACATATTTAACCTTATTGTATGTTATGCTTTAAAGGAGCATAATGAGAGCATTTGTAGAATTCGAAACGCTATTAGATATGTGAGATCTTCCCTTGCACGTATGATGAAGTTTAAAAAGTGTGCTGAAAATGAAAGAATATCTTGCAACAATATTATATGTCTTGATGTTCCCACTAGATGGAACTCTACGTATATGATGCTTGAAATGGCTATTAAGTTTGCAAGAGCATTTGATAGATTAGAAGATGATGAAGATGCTTATAGGAATGATTCACCACTTACTAAAGAGGATTGGTCAACTGCAATGATGTTGATTATATTTTTTAAAGTGTTTTATACTGTCACATTGAAAGTATCTGGATCTTTGTATACAACTTCAAACTTGGTTTTTCATGAGATACGTAGAATTCAGAATTGCATACAAAAGAATGCTAATAGTGGAAATAAAATGATTTCTACTATGGCTAATAATATGAAGCCTAAGTTTGACAAGTATTGGGGAAATGATGATAGGAAAAATAATATACTACTGTGCATTACTGTGGTTTTAGATCCTCGTTCAAGGTGAAGTACTTAACATATTGTTGGACAAATCTTTTTGGGCTAGACATTACCAAAATTAAGGTTAGAACAATTGAAAATGTTATGAGGCATCTTTTCTATGAATACAACAATGGGCAAATTAATGGTGTTTGTGTTAGTTCTAGTGATAGTTGTAATGCAAGTGTTTGGTGTTGGTGTTAATGCAGGTGCTAGTTGTAGTCCTAGTTCGTGTGAATCTACTAATGATCCTCATATTCGTGGTCGTAATTTTCAACTGTTTTGGATAG

mRNA sequence

ATGATTGACGACGATGCCTCATGCCCGTTTCCCTTAACGCTGCACAGCTTGACTGCACAGAGAGGAGTCCTTCTCTTTCGTAGTTCGCTTGTAGCCTGTAGTGCACGTCCAACTGATTCCGTTCGACCGTTTGATTTCGTTGATCGGCCATCCACATCTAGAAAGTCTCCACAGTCCAAAGTGCTAGTTGTAGTCCTAGTTCGTGTGAATCTACTAATGATCCTCATATTCGTGGTCGTAATTTTCAACTGTTTTGGATAG

Coding sequence (CDS)

ATGATTGACGACGATGCCTCATGCCCGTTTCCCTTAACGCTGCACAGCTTGACTGCACAGAGAGGAGTCCTTCTCTTTCGTAGTTCGCTTGTAGCCTGTAGTGCACGTCCAACTGATTCCGTTCGACCGTTTGATTTCGTTGATCGGCCATCCACATCTAGAAAGTCTCCACAGTCCAAAGTGCTAGTTGTAGTCCTAGTTCGTGTGAATCTACTAATGATCCTCATATTCGTGGTCGTAATTTTCAACTGTTTTGGATAG

Protein sequence

MIDDDASCPFPLTLHSLTAQRGVLLFRSSLVACSARPTDSVRPFDFVDRPSTSRKSPQSKVLVVVLVRVNLLMILIFVVVIFNCFG
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C08G148890.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C08G148890.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C08G148890.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C08G148890.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C08G148890Cla97C08G148890gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C08G148890.1-exonCla97C08G148890.1-exon-Cla97Chr08:17184719..17184799exon
Cla97C08G148890.1-exonCla97C08G148890.1-exon-Cla97Chr08:17186659..17186838exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C08G148890.1-cdsCla97C08G148890.1-cds-Cla97Chr08:17184719..17184799CDS
Cla97C08G148890.1-cdsCla97C08G148890.1-cds-Cla97Chr08:17186659..17186838CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C08G148890.1Cla97C08G148890.1-proteinpolypeptide