Cla97C07G135090.2 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C07G135090.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr07: 19814972 .. 19816830 (-)
Sequence length	462
RNA-Seq Expression	Cla97C07G135090.2
Synteny	Cla97C07G135090.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGCTCTCTTGAAAGAGCAAGAAGCGAGAGCAATGAGTTGGATGAGGAAACAAAGGATGAGGTTGAAGAAGTCGATTACTTACAGAATATAGCGAACATTGCGCCAAAAATGATCCTCAAGGAAGGCAACACCGCATCATCTAAGCTTCCAAACAAAAACATCAAACAATTGAAACAAGATGTGATTGAGCCTATCAATATCCATTCTTATCTTTGGTTTCCATTAATGGTGGGGCAAGGTAAGTAATTCTAGTTTGGGTTTGGTAGTTTTTCCCTTTAGATTAGTTGTGAGACTTGTTCTTCATCCGACATTATTCAAATACTCTTGTTTCTGGATTTTACCATTGAATGGACTGATTATGAATTGTATTATCTTGTGATTGCTTGATGAACAATTATTCATGGTATGATTCAATATTTTTAATTTGTACTTTGGTAAATAAATCATTAGGAAGCAAAGGGTTAGATTAATTTGCTTTTTGTGAGTCAGCTGCTAGTAAGTATTACTTTAATAAACCTAGAGGTAAAATTGCATTGAATATTTAATGACGGCTTTTTTGATTAAATATTCATCTTAATATATTTCATTAAGCTTAATGTGATTGGTTCAAGTGTTTGGAACATGTTCTTCTACTCATATTGGCTAATTAGGTAATTAAGACAATTGATTAGTGTTTCTAATCAATTTGTCTAGACTTAGGCAACAAGTATGATATAGAGCTCAATGATAAATTAAATTAATGGGGAAAACTTCAAATTAAACCCGAGCTAAGCCTTTTTAATCATAATTTGACAACTCTCTTCTCTCTCTCTTGCTCTCATTTATTATGATGCAATTTACTTTTCTTACACTTAAATCAAACCAAACCCCCCCTTATTACCTCGGGACTGTAAGCATTCTTATTAAGAAACACAAAGATTCTTTGTGGATTCGACCTGTAATTCCACTACTGCCGTTAAGGAAGGAATAGTAATTATTTGGTCCCATCGGAGAATTTGACACCCTTCGATCGCTCGATCAGAGGACCTACAAAAAAAATGAAAAAAGGGCTCAGATGTAGAAGTTAGAGATGGACAACTGTTGATTGGAGAATGATATTGGTAATTTTGGACTAGTAAAAGGACTGAGTTAAAAGTAAACCCATGAGAGTTACATTATCCTAAAATGGACTCAAGATTGGTAGGAAATGGGCTCCGGTGAGTTCCTTTGAAGTATGGGATGAGAAATTGGGTCATATGGCCCAGTTGGCCCACCTTGGTCTCAGAGGTCGAGGCTAAGGCTGATAAGTCATCTAGGACCTCCATATTGGTCCAGTCCAACCTTTAAGGATCTTGTTTCCAAAGGGATAAAGGAGATAGAATCTTAACCCTAAAAGGATGAGGAAGATTCCTAACAAGACTCCATTATAAATAGAGCATGACAATCCAACATGAAGTAAGTCCATCTTCCTCCTTAAATTGTTTGATTTGACCTTTGTGTCAAGATCTAACTTAAGCATTGGAGTGCTCGTAGCAAGCACCACACTAGTGTGTTATTTTAGCTATTATGCAGATGATCTCCTCCTTATATTATACATTTACCTTTGATAGTACATGAAAGTCAGGTGAATTCACTTGTCCAAATTTTGCCATCAACAGTTGGCATTGTCTATGTGGAACAAGTGTTGCTTGAAAAAATTATAACACACCAGAAGGATGGACCAACGAAATGATAGTGACTCTGATCAAGACAGGCATCCTTAGAGAACTATGAGTCCATCGGAGGACAAGCAGCTAGTTCGGAACCCTTCTTGGCCTCAACCTCTGAAGGAGGAGGAAGAGGAGAAAGTCACGGCTTTTGGAAAAGAAGGTTGA

mRNA sequence

ATGATTAGCTCTCTTGAAAGAGCAAGAAGCGAGAGCAATGAGTTGGATGAGGAAACAAAGGATGAGGTTGAAGAAGTCGATTACTTACAGAATATAGCGAACATTGCGCCAAAAATGATCCTCAAGGAAGGCAACACCGCATCATCTAAGCTTCCAAACAAAAACATCAAACAATTGAAACAAGATGTGATTGAGCCTATCAATATCCATTCTTATCTTTGGTTTCCATTAATGGTGGGGCAAGTTCCTTTGAAGTATGGGATGAGAAATTGGGTCATATGGCCCAGTTGGCCCACCTTGGTCTCAGAGGTCGAGGCTAAGGCTGATAAGTCATCTAGGACCTCCATATTGAGAACTATGAGTCCATCGGAGGACAAGCAGCTAGTTCGGAACCCTTCTTGGCCTCAACCTCTGAAGGAGGAGGAAGAGGAGAAAGTCACGGCTTTTGGAAAAGAAGGTTGA

Coding sequence (CDS)

ATGATTAGCTCTCTTGAAAGAGCAAGAAGCGAGAGCAATGAGTTGGATGAGGAAACAAAGGATGAGGTTGAAGAAGTCGATTACTTACAGAATATAGCGAACATTGCGCCAAAAATGATCCTCAAGGAAGGCAACACCGCATCATCTAAGCTTCCAAACAAAAACATCAAACAATTGAAACAAGATGTGATTGAGCCTATCAATATCCATTCTTATCTTTGGTTTCCATTAATGGTGGGGCAAGTTCCTTTGAAGTATGGGATGAGAAATTGGGTCATATGGCCCAGTTGGCCCACCTTGGTCTCAGAGGTCGAGGCTAAGGCTGATAAGTCATCTAGGACCTCCATATTGAGAACTATGAGTCCATCGGAGGACAAGCAGCTAGTTCGGAACCCTTCTTGGCCTCAACCTCTGAAGGAGGAGGAAGAGGAGAAAGTCACGGCTTTTGGAAAAGAAGGTTGA

Protein sequence

MISSLERARSESNELDEETKDEVEEVDYLQNIANIAPKMILKEGNTASSKLPNKNIKQLKQDVIEPINIHSYLWFPLMVGQVPLKYGMRNWVIWPSWPTLVSEVEAKADKSSRTSILRTMSPSEDKQLVRNPSWPQPLKEEEEEKVTAFGKEG

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C07G135090.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C07G135090.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C07G135090.2 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C07G135090.2 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C07G135090	Cla97C07G135090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C07G135090.2-exon	Cla97C07G135090.2-exon-Cla97Chr07:19814972..19815082	exon
Cla97C07G135090.2-exon	Cla97C07G135090.2-exon-Cla97Chr07:19815517..19815623	exon
Cla97C07G135090.2-exon	Cla97C07G135090.2-exon-Cla97Chr07:19816587..19816830	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C07G135090.2-cds	Cla97C07G135090.2-cds-Cla97Chr07:19814972..19815082	CDS
Cla97C07G135090.2-cds	Cla97C07G135090.2-cds-Cla97Chr07:19815517..19815623	CDS
Cla97C07G135090.2-cds	Cla97C07G135090.2-cds-Cla97Chr07:19816587..19816830	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C07G135090.2	Cla97C07G135090.2-protein	polypeptide