Cla97C06G124270.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C06G124270.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 26476349 .. 26477180 (+)
Sequence length270
RNA-Seq ExpressionCla97C06G124270.1
SyntenyCla97C06G124270.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGACACTCTTCAGAGTGTTGGCGACAAGCATCAAACCGATAATGCCGAACGTTCATCTTTCTCCCTCTACAATCATACCCATCTGATTGAAATTTAATTCTTTAATTTCTTCTTTCAATTTTATTTTCTTGATTTTCGGCAAGATTCAAGATCCCAAACCCATCAAAGAATATTTGACGTTCCTTGCGATTCCAGAGACTGATTGAACCGACTCTCCTTGCTGCTCTGTCACCACGCGTCATTCTTCAAAATCCGGCGAATCGGCGCTGTGGGTCTGTAGATAAATGCTGAGGGGCTCGTGATGCGAGGTTTTGTAGCGTAGGGGATTACGAGAGTTGCCCGTTGGTAGCGTTTGATCAATAGGGTTCCGAAATTGTAATCCTTATAGCCGCAATTTGTTTGGTATGGTTTTCATTGCTAAAATACAATTTGGGTTTTGGTTTTTTGATGGAGTTTGTCGTGGTGGGTTGCTGTCAAGCTGACTGAATTTGATACTCTGCTCGCTTGATTTGCTGTTTGGGTGCTTAATCGATTGAAGGGTAGCACTACAGTGTTCAGGTACAGTTGCACAAACAATGAAATTACTCTGTTTGATTTATTTCCTTTTTTGATACGAACAGAGCAGTTTTTTGGGTTATTGAATTGAGGGTAATTTGCTGAAATACAGAACAAAGTTACTAGTTCTGTACGAGATTCGAGTGTTTTGATTGTGTAAGTGACATTGTTAGGTGAATTCATCAGGTGTTGGCCGCCTATTAGATTGCTTTTGGGGAGTTGTGAGATTGGAATGTTGCTTAATTGGGGATGGATATCTTTCAGCTCGATAA

mRNA sequence

ATGGAGGACACTCTTCAGAGTGTTGGCGACAAGCATCAAACCGATAATGCCGAACATTCAAGATCCCAAACCCATCAAAGAATATTTGACAGACTGATTGAACCGACTCTCCTTGCTGCTCTGTCACCACGCGTCATTCTTCAAAATCCGGCGAATCGGCGCTGTGGGTCTGTGAATTCATCAGGTGTTGGCCGCCTATTAGATTGCTTTTGGGGAGTTGTGAGATTGGAATGTTGCTTAATTGGGGATGGATATCTTTCAGCTCGATAA

Coding sequence (CDS)

ATGGAGGACACTCTTCAGAGTGTTGGCGACAAGCATCAAACCGATAATGCCGAACATTCAAGATCCCAAACCCATCAAAGAATATTTGACAGACTGATTGAACCGACTCTCCTTGCTGCTCTGTCACCACGCGTCATTCTTCAAAATCCGGCGAATCGGCGCTGTGGGTCTGTGAATTCATCAGGTGTTGGCCGCCTATTAGATTGCTTTTGGGGAGTTGTGAGATTGGAATGTTGCTTAATTGGGGATGGATATCTTTCAGCTCGATAA

Protein sequence

MEDTLQSVGDKHQTDNAEHSRSQTHQRIFDRLIEPTLLAALSPRVILQNPANRRCGSVNSSGVGRLLDCFWGVVRLECCLIGDGYLSAR
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C06G124270.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G124270.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G124270.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G124270.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C06G124270Cla97C06G124270gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G124270.1-exonCla97C06G124270.1-exon-Cla97Chr06:26476349..26476403exon
Cla97C06G124270.1-exonCla97C06G124270.1-exon-Cla97Chr06:26476497..26476531exon
Cla97C06G124270.1-exonCla97C06G124270.1-exon-Cla97Chr06:26476549..26476629exon
Cla97C06G124270.1-exonCla97C06G124270.1-exon-Cla97Chr06:26477082..26477180exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C06G124270.1-cdsCla97C06G124270.1-cds-Cla97Chr06:26476349..26476403CDS
Cla97C06G124270.1-cdsCla97C06G124270.1-cds-Cla97Chr06:26476497..26476531CDS
Cla97C06G124270.1-cdsCla97C06G124270.1-cds-Cla97Chr06:26476549..26476629CDS
Cla97C06G124270.1-cdsCla97C06G124270.1-cds-Cla97Chr06:26477082..26477180CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C06G124270.1Cla97C06G124270.1-proteinpolypeptide