Cla97C05G095543.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C05G095543.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr05: 22116838 .. 22117428 (+)
Sequence length	444
RNA-Seq Expression	Cla97C05G095543.1
Synteny	Cla97C05G095543.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAACACCGAAGCCCGCATCGTGCTCCGCTTCAGCCCTTCCAAGGCTCGTCGCGGGCCGCGTCGTCGGTGCTCGCTCTCTCGGATGCAGTGCATTCGGCGGCATGATATGCTCGAGAATTCTCTCGAACGTGTTGCCTCTTATAAATTGCTTCAACGAATGACGCTCGCTCCCCGCGTTGATCTGGCACCCGCAGTCGTCCTAACGGACGGCGGCAGGTGCTGTCATGCGGGCTGCGACGTCGTGTAGGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAG

mRNA sequence

ATGACGAACACCGAAGCCCGCATCGTGCTCCGCTTCAGCCCTTCCAAGGCTCGTCGCGGGCCGCGTCGTCGGTGCTCGCTCTCTCGGATGCAGTGCATTCGGCGGCATGATATGCTCGAGAATTCTCTCGAACGTGTTGCCTCTTATAAATTGCTTCAACGAATGACGCTCGCTCCCCGCGTTGATCTGGCACCCGCAGTCGTCCTAACGGACGGCGGCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAG

Coding sequence (CDS)

ATGACGAACACCGAAGCCCGCATCGTGCTCCGCTTCAGCCCTTCCAAGGCTCGTCGCGGGCCGCGTCGTCGGTGCTCGCTCTCTCGGATGCAGTGCATTCGGCGGCATGATATGCTCGAGAATTCTCTCGAACGTGTTGCCTCTTATAAATTGCTTCAACGAATGACGCTCGCTCCCCGCGTTGATCTGGCACCCGCAGTCGTCCTAACGGACGGCGGCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAG

Protein sequence

MTNTEARIVLRFSPSKARRGPRRRCSLSRMQCIRRHDMLENSLERVASYKLLQRMTLAPRVDLAPAVVLTDGGSYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPATHHSNFCPINFRW

Homology

[Close]

BLAST of Cla97C05G095543.1 vs. NCBI nr
Match: KAG6675228.1 (hypothetical protein I3842_15G091100 [Carya illinoinensis])

HSP 1 Score: 154.1 bits (388), Expect = 9.6e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 74  SYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP 133
           +YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP
Sbjct: 81  NYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP 140

Query: 134 ATHHSNFCPINFR 147
           ATHHSNFCPINFR
Sbjct: 141 ATHHSNFCPINFR 153

[Close]

BLAST of Cla97C05G095543.1 vs. NCBI nr
Match: XP_017609674.1 (PREDICTED: uncharacterized protein LOC108455646 [Gossypium arboreum])

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-33
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTD  A VPA
Sbjct: 25  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDHMAFVPA 84

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 85  THHSNFCPINFRW 97

[Close]

BLAST of Cla97C05G095543.1 vs. NCBI nr
Match: KAF7807889.1 (hypothetical protein G2W53_040050 [Senna tora])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGI YSDNRSNSRANTCNKPRL EGMHLLDKRSTRALPVALMIHDNSTDRTA VPA
Sbjct: 296 YSLFDGIYYSDNRSNSRANTCNKPRLAEGMHLLDKRSTRALPVALMIHDNSTDRTATVPA 355

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 356 THHSNFCPINFRW 368

[Close]

BLAST of Cla97C05G095543.1 vs. NCBI nr
Match: KRH17769.1 (hypothetical protein GLYMA_13G014200v4 [Glycine max] >RZB70543.1 hypothetical protein D0Y65_035490 [Glycine soja])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 74  SYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP 133
           +YSLFDGI YSDNRSNSRANTCNKPRLLEGMHLLDKRST+ALPVALMIHDNS+DRTA VP
Sbjct: 111 NYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTQALPVALMIHDNSSDRTAFVP 170

Query: 134 ATHHSNFCPINFRW 148
           ATHHSNFCPINFRW
Sbjct: 171 ATHHSNFCPINFRW 184

[Close]

BLAST of Cla97C05G095543.1 vs. NCBI nr
Match: RZB41102.1 (hypothetical protein D0Y65_055488 [Glycine soja])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGI YSDNRSNSRANTCNKPRLLEGMHLLDKRST+ALPVALMIHDNS+DRTA VPA
Sbjct: 38  YSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTQALPVALMIHDNSSDRTAFVPA 97

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 98  THHSNFCPINFRW 110

[Close]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL
Match: A0A6P4LTB3 (uncharacterized protein LOC108455646 OS=Gossypium arboreum OX=29729 GN=LOC108455646 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTD  A VPA
Sbjct: 25  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDHMAFVPA 84

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 85  THHSNFCPINFRW 97

[Close]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL
Match: A0A0R0GR39 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G013900 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.7e-33
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 74  SYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP 133
           +YSLFDGI YSDNRSNSRANTCNKPRLLEGMHLLDKRST+ALPVALMIHDNS+DRTA VP
Sbjct: 111 NYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTQALPVALMIHDNSSDRTAFVP 170

Query: 134 ATHHSNFCPINFRW 148
           ATHHSNFCPINFRW
Sbjct: 171 ATHHSNFCPINFRW 184

[Close]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL
Match: A0A445H9Y3 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_035490 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.7e-33
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 74  SYSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVP 133
           +YSLFDGI YSDNRSNSRANTCNKPRLLEGMHLLDKRST+ALPVALMIHDNS+DRTA VP
Sbjct: 111 NYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTQALPVALMIHDNSSDRTAFVP 170

Query: 134 ATHHSNFCPINFRW 148
           ATHHSNFCPINFRW
Sbjct: 171 ATHHSNFCPINFRW 184

[Close]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL
Match: A0A445EXN5 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_055488 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGI YSDNRSNSRANTCNKPRLLEGMHLLDKRST+ALPVALMIHDNS+DRTA VPA
Sbjct: 38  YSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTQALPVALMIHDNSSDRTAFVPA 97

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 98  THHSNFCPINFRW 110

[Close]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL
Match: A0A6P4LTA9 (uncharacterized protein LOC108455641 OS=Gossypium arboreum OX=29729 GN=LOC108455641 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.5e-32
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 75  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVALMIHDNSTDRTAIVPA 134
           YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVA  IHDNSTDRTA VPA
Sbjct: 25  YSLFDGICYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVA--IHDNSTDRTAFVPA 84

Query: 135 THHSNFCPINFRW 148
           THHSNFCPINFRW
Sbjct: 85  THHSNFCPINFRW 95

The following BLAST results are available for this feature:

BLAST of Cla97C05G095543.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6675228.1	9.6e-34	98.63	hypothetical protein I3842_15G091100 [Carya illinoinensis]	[more]
XP_017609674.1	2.8e-33	95.89	PREDICTED: uncharacterized protein LOC108455646 [Gossypium arboreum]	[more]
KAF7807889.1	1.4e-32	95.89	hypothetical protein G2W53_040050 [Senna tora]	[more]
KRH17769.1	1.8e-32	93.24	hypothetical protein GLYMA_13G014200v4 [Glycine max] >RZB70543.1 hypothetical pr...	[more]
RZB41102.1	2.4e-32	94.52	hypothetical protein D0Y65_055488 [Glycine soja]	[more]

BLAST of Cla97C05G095543.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P4LTB3	1.3e-33	95.89	uncharacterized protein LOC108455646 OS=Gossypium arboreum OX=29729 GN=LOC108455...	[more]
A0A0R0GR39	8.7e-33	93.24	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G013900 PE=4 SV=1	[more]
A0A445H9Y3	8.7e-33	93.24	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_035490 PE=4 SV=1	[more]
A0A445EXN5	1.1e-32	94.52	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_055488 PE=4 SV=1	[more]
A0A6P4LTA9	2.5e-32	95.89	uncharacterized protein LOC108455641 OS=Gossypium arboreum OX=29729 GN=LOC108455...	[more]

BLAST of Cla97C05G095543.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34410	INTRON-ENCODED HOMING ENDONUCLEASE, PUTATIVE-RELATED	coord: 81..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C05G095543	Cla97C05G095543	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C05G095543.1-exon	Cla97C05G095543.1-exon-Cla97Chr05:22116838..22117058	exon
Cla97C05G095543.1-exon	Cla97C05G095543.1-exon-Cla97Chr05:22117206..22117428	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C05G095543.1-cds	Cla97C05G095543.1-cds-Cla97Chr05:22116838..22117058	CDS
Cla97C05G095543.1-cds	Cla97C05G095543.1-cds-Cla97Chr05:22117206..22117428	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C05G095543.1	Cla97C05G095543.1-protein	polypeptide