Cla97C04G070960.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C04G070960.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr04: 15523603 .. 15524265 (-)
Sequence length291
RNA-Seq ExpressionCla97C04G070960.1
SyntenyCla97C04G070960.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTGCCCAAGCTTCTTGTGGGATTGAAAGGGAGAGGAGATGAGGAGGGAAGCAAGGAGGAGAGAGGATGGGATGGGGAAAGAGAAGTGAGAGGTAACAATTCTTTTATTTTTTAATATAACAAACGACATATTAGTAATTAAGATAATAAAAAAAATACCCAATTAATTTAGTAGGGATCATTTAAACCTAATTATCAAAACTAGGAATTAAAATGGCTATGGATCAAACGCACACATCCCTTCAAACTCAAAGATTTAAAAATATATTTTTCCCAGAAGAAAGAAAAAAAAAAAAAAGAAAAAATCTAGGTTGAAAGGTAAATATATGTGTGTGTGAAGTTTTTAAAAAAAAATCCCCAGCTTCTATTTTATGCAAACGCACAGACGCCTCCCCCCACATCACTTTTTCTCCCTTTCACACTATTCCAACCGCCCACCACAATGTTGATCACTTGCGCAGCCACCGTACCTTGTCGGTCCTCGTCGTCACTCAGCCTACCGTTTGTAGGTTGTGGATTTGGTTCTCTCTCTTCGATTTCAGAGTCCTCTCTCTTTCAGATTTGATTTATTTGGCCACTACCCAACAGCCACACCACGATTTCGCTGCGTGCTTGTGGTGTTGCTCCCAACAACCCGCACGTGAAAGTCACATATTAA

mRNA sequence

ATGCTTGTGCCCAAGCTTCTTGTGGGATTGAAAGGGAGAGGAGATGAGGAGGGAAGCAAGGAGGAGAGAGGATGGGATGGGGAAAGAGAAGTGAGAGACGCCTCCCCCCACATCACTTTTTCTCCCTTTCACACTATTCCAACCGCCCACCACAATGTTGATCACTTGCGCAGCCACCGTACCTTGTCGGTCCTCGTCGTCACTCAGCCTACCGTTTGTAGCCACACCACGATTTCGCTGCGTGCTTGTGGTGTTGCTCCCAACAACCCGCACGTGAAAGTCACATATTAA

Coding sequence (CDS)

ATGCTTGTGCCCAAGCTTCTTGTGGGATTGAAAGGGAGAGGAGATGAGGAGGGAAGCAAGGAGGAGAGAGGATGGGATGGGGAAAGAGAAGTGAGAGACGCCTCCCCCCACATCACTTTTTCTCCCTTTCACACTATTCCAACCGCCCACCACAATGTTGATCACTTGCGCAGCCACCGTACCTTGTCGGTCCTCGTCGTCACTCAGCCTACCGTTTGTAGCCACACCACGATTTCGCTGCGTGCTTGTGGTGTTGCTCCCAACAACCCGCACGTGAAAGTCACATATTAA

Protein sequence

MLVPKLLVGLKGRGDEEGSKEERGWDGEREVRDASPHITFSPFHTIPTAHHNVDHLRSHRTLSVLVVTQPTVCSHTTISLRACGVAPNNPHVKVTY
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C04G070960.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C04G070960.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C04G070960.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C04G070960.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..31

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C04G070960Cla97C04G070960gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C04G070960.1-exonCla97C04G070960.1-exon-Cla97Chr04:15523603..15523672exon
Cla97C04G070960.1-exonCla97C04G070960.1-exon-Cla97Chr04:15523752..15523875exon
Cla97C04G070960.1-exonCla97C04G070960.1-exon-Cla97Chr04:15524169..15524265exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C04G070960.1-cdsCla97C04G070960.1-cds-Cla97Chr04:15523603..15523672CDS
Cla97C04G070960.1-cdsCla97C04G070960.1-cds-Cla97Chr04:15523752..15523875CDS
Cla97C04G070960.1-cdsCla97C04G070960.1-cds-Cla97Chr04:15524169..15524265CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C04G070960.1Cla97C04G070960.1-proteinpolypeptide