Cla97C04G070105.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C04G070105.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Reverse transcriptase
Location	Cla97Chr04: 8735764 .. 8736548 (+)
Sequence length	627
RNA-Seq Expression	Cla97C04G070105.1
Synteny	Cla97C04G070105.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAGCCAATATTTGTTACAATTGTGAACATCCATGTCATTTTAAGAGGGATTGCCCACAACTTAGGCCAAGAAATGAGGTTGAGCAAGGAACAGTATCCCAGATAGTAAACCAGCCAAAGCAAGGGACAGGAACTGGTGATGCCAGTAGTGCTGGGAGACAAAGGGGTCAAGTAGGGAGACCTAGACAGTAGGGAAAGGTGTATGTCATGACTCAGCAGGAGGCTGAGAAGACTCCAAACGTGGTGACGGGTACGATGACTATTTGTTCTAAGACTACTTATGTGTTAATTGATCTTGGAGCTACACGTTCGTTTGTTTCTCGAGCTTTTGCTATGCATGTGAATAAGAGATTAGAACCATGGTTCGATGCTTTACTAGTATATACTTCTGTTGGTGATCATGTGATTATTGAGCATGTTTAGCGTGATTGTGAATAGTAGTTGATAATGTAGTTATGTTGGTTGATCTATTGCCTTTAGAGTTAGTAGAGTTTGATGTTATTCTAGGCGTGGACTTTCTGGCAAAGTATCATGCTACTATTGATTACTTTAAGAAGGAAGTGAGATTTGAGAAGCCAGGTGAGGCTGAGGTGGTGTTTCAGGGGAGAAGAAAGATTCTTCCTACCTGTGTAATATCTGCAGTAAAAGCTAGAAAGATGTTGAGTAAGGGTTGTGAAACGTACCTAGCACATGTAATTAAGGTGAAGCTAGAAAAGTTGAGACCTGAAGATGTGCCTGATGTGAAATTCTGCAAGTACACAGGTCAAGTTATAATATAA

mRNA sequence

ATGAGTGGAGCCAATATTTGTTACAATTGTGAACATCCATGTCATTTTAAGAGGGATTGCCCACAACTTAGGCCAAGAAATGAGGTTGAGCAAGGAACAGTATCCCAGATAGTAAACCAGCCAAAGCAAGGGACAGGAACTGGTGATGCCAGTAGTGCTGGGAGACAAAGGGGTCAACAGGAGGCTGAGAAGACTCCAAACGTGGTGACGGGTACGATGACTATTTGTTCTAAGACTACTTATGTGTTAATTGATCTTGGAGCTACACGTTCGTTTGTTTCTCGAGCTTTTGCTATGCATGTGAATAAGAGATTAGAACCATGGTTCGATGCTTTACTAGTATATACTTCTGTTGGCGTGGACTTTCTGGCAAAGTATCATGCTACTATTGATTACTTTAAGAAGGAAGTGAGATTTGAGAAGCCAGGTGAGGCTGAGGTGGTGTTTCAGGGGAGAAGAAAGATTCTTCCTACCTGTGTAATATCTGCAGTAAAAGCTAGAAAGATGTTGAGTAAGGGTTGTGAAACGTACCTAGCACATGTAATTAAGGTGAAGCTAGAAAAGTTGAGACCTGAAGATGTGCCTGATGTGAAATTCTGCAAGTACACAGGTCAAGTTATAATATAA

Coding sequence (CDS)

ATGAGTGGAGCCAATATTTGTTACAATTGTGAACATCCATGTCATTTTAAGAGGGATTGCCCACAACTTAGGCCAAGAAATGAGGTTGAGCAAGGAACAGTATCCCAGATAGTAAACCAGCCAAAGCAAGGGACAGGAACTGGTGATGCCAGTAGTGCTGGGAGACAAAGGGGTCAACAGGAGGCTGAGAAGACTCCAAACGTGGTGACGGGTACGATGACTATTTGTTCTAAGACTACTTATGTGTTAATTGATCTTGGAGCTACACGTTCGTTTGTTTCTCGAGCTTTTGCTATGCATGTGAATAAGAGATTAGAACCATGGTTCGATGCTTTACTAGTATATACTTCTGTTGGCGTGGACTTTCTGGCAAAGTATCATGCTACTATTGATTACTTTAAGAAGGAAGTGAGATTTGAGAAGCCAGGTGAGGCTGAGGTGGTGTTTCAGGGGAGAAGAAAGATTCTTCCTACCTGTGTAATATCTGCAGTAAAAGCTAGAAAGATGTTGAGTAAGGGTTGTGAAACGTACCTAGCACATGTAATTAAGGTGAAGCTAGAAAAGTTGAGACCTGAAGATGTGCCTGATGTGAAATTCTGCAAGTACACAGGTCAAGTTATAATATAA

Protein sequence

MSGANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRGQQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEPWFDALLVYTSVGVDFLAKYHATIDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKLRPEDVPDVKFCKYTGQVII

Homology

[Close]

BLAST of Cla97C04G070105.1 vs. NCBI nr
Match: TYK06319.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 98/225 (43.56%), Postives = 132/225 (58.67%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C  P HFK+DCPQL    + +QG  SQ V Q +      + +S  RQ+G    
Sbjct: 561 GAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGLFGR 620

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+ GT+ IC+    VL DLGAT SFVS  F   +N+ LEP
Sbjct: 621 PRKQGKVYAMTQQEAEDAPDVIPGTILICNVPADVLFDLGATHSFVSSIFLTKLNRMLEP 680

Query: 123 WFDALLVYTSV--------------GVDFLAKYHATIDYFKKEVRFEKPGEAEVVFQGRR 182
             + L +YT V              G+DFL  ++A++D  +KEV F KPG  EVVF+G +
Sbjct: 681 LSEGLAIYTPVGDVLLVNERLDVILGMDFLFAHYASMDCHRKEVVFRKPGFPEVVFRGMK 740

Query: 183 KILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKLRPEDVPDVK 199
           K++   +IS +KA K+L KGC T+LAH++ V+ EKL+PEDVP VK
Sbjct: 741 KVVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVK 785

[Close]

BLAST of Cla97C04G070105.1 vs. NCBI nr
Match: KAA0041696.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 5.7e-40
Identity = 98/225 (43.56%), Postives = 131/225 (58.22%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C  P HFK+DCPQL    + +QG  SQ V Q +      + +S  RQ+G    
Sbjct: 561 GAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGLFGR 620

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+ GT+ IC+    VL DLGAT SFVS  F   +N+ LEP
Sbjct: 621 PRKQGKVYAMTQQEAEDAPDVIPGTILICNVPADVLFDLGATHSFVSSIFLTKLNRMLEP 680

Query: 123 WFDALLVYTSV--------------GVDFLAKYHATIDYFKKEVRFEKPGEAEVVFQGRR 182
             + L  YT V              G+DFL  ++A++D  +KEV F KPG  EVVF+G +
Sbjct: 681 LSEGLDTYTPVGDVLLVNERLDVILGMDFLFAHYASMDCHRKEVVFRKPGFPEVVFRGMK 740

Query: 183 KILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKLRPEDVPDVK 199
           K++   +IS +KA K+L KGC T+LAH++ V+ EKL+PEDVP VK
Sbjct: 741 KVVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVK 785

[Close]

BLAST of Cla97C04G070105.1 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C    HFKRDCPQLR     +QG  S  V Q +  T  G+ +S  RQ+G    
Sbjct: 552 GAGVCYQCGKTGHFKRDCPQLRVVVRRDQGVESHTVEQSRISTAAGEETSGARQKGVVGR 611

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+T T+ IC+  T VL+D GAT SFVS  F   +N+ LEP
Sbjct: 612 PRQQGKVYAMTQQEAEDAPDVITETILICNVPTRVLLDSGATHSFVSSMFLTKINRMLEP 671

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L++ T V                                      G+DFL  ++A+
Sbjct: 672 LPEELVICTPVGDVLLVSEVLCDCEVVVEGLYMSVDLLPLELQTLDVILGMDFLFTHYAS 731

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 198
           ++  +KEV F+KPG  EV+F+G R I+PT +ISA+KA K+L KGC  +LAHV++V+ EKL
Sbjct: 732 MNCHRKEVTFKKPGSTEVIFKGERNIIPTSLISALKAEKLLRKGCTAFLAHVVEVQEEKL 791

[Close]

BLAST of Cla97C04G070105.1 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C    HFKRDCPQLR     +QG  S  V Q +  T  G+ +S  RQ+G    
Sbjct: 552 GAGVCYQCGKTGHFKRDCPQLRVVVRRDQGVESHTVEQSRISTAAGEETSGARQKGVVGR 611

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+T T+ IC+  T VL+D GAT SFVS  F   +N+ LEP
Sbjct: 612 PRQQGKVYAMTQQEAEDAPDVITETILICNVPTRVLLDSGATHSFVSSMFLTKINRMLEP 671

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L++ T V                                      G+DFL  ++A+
Sbjct: 672 LPEELVICTPVGDVLLVSEVLCDCEVVVEGLYMSVDLLPLELQTLDVILGMDFLFTHYAS 731

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 198
           ++  +KEV F+KPG  EV+F+G R I+PT +ISA+KA K+L KGC  +LAHV++V+ EKL
Sbjct: 732 MNCHRKEVTFKKPGSTEVIFKGERNIIPTSLISALKAEKLLRKGCTAFLAHVVEVQEEKL 791

[Close]

BLAST of Cla97C04G070105.1 vs. NCBI nr
Match: KAA0045363.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-37
Identity = 99/249 (39.76%), Postives = 130/249 (52.21%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA  CY C  P HFK+DCPQL    + +QG  SQ V Q +      + +S  RQ+G    
Sbjct: 340 GAGACYQCRQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGDVGR 399

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+TGT+ IC+    VL D GAT SFVS  F   +N+ LEP
Sbjct: 400 PRQQGKVYAMTQQEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEP 459

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L +YT V                                      G+DFL  ++A+
Sbjct: 460 LSEGLAIYTPVCDVLLVNEVLRNCEVLVEGISFLVDLLPLELQRLDVILGMDFLFAHYAS 519

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 199
           +D  +KEV F KPG AEVVF+G RK +   +IS +KA K+  KGC T+LAH++ V+ EKL
Sbjct: 520 MDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLQRKGCTTFLAHIVVVQREKL 579

[Close]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL
Match: A0A5D3C7J1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00290 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.5e-41
Identity = 98/225 (43.56%), Postives = 132/225 (58.67%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C  P HFK+DCPQL    + +QG  SQ V Q +      + +S  RQ+G    
Sbjct: 561 GAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGLFGR 620

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+ GT+ IC+    VL DLGAT SFVS  F   +N+ LEP
Sbjct: 621 PRKQGKVYAMTQQEAEDAPDVIPGTILICNVPADVLFDLGATHSFVSSIFLTKLNRMLEP 680

Query: 123 WFDALLVYTSV--------------GVDFLAKYHATIDYFKKEVRFEKPGEAEVVFQGRR 182
             + L +YT V              G+DFL  ++A++D  +KEV F KPG  EVVF+G +
Sbjct: 681 LSEGLAIYTPVGDVLLVNERLDVILGMDFLFAHYASMDCHRKEVVFRKPGFPEVVFRGMK 740

Query: 183 KILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKLRPEDVPDVK 199
           K++   +IS +KA K+L KGC T+LAH++ V+ EKL+PEDVP VK
Sbjct: 741 KVVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVK 785

[Close]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL
Match: A0A5A7TI15 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00260 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.7e-40
Identity = 98/225 (43.56%), Postives = 131/225 (58.22%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C  P HFK+DCPQL    + +QG  SQ V Q +      + +S  RQ+G    
Sbjct: 561 GAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGLFGR 620

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+ GT+ IC+    VL DLGAT SFVS  F   +N+ LEP
Sbjct: 621 PRKQGKVYAMTQQEAEDAPDVIPGTILICNVPADVLFDLGATHSFVSSIFLTKLNRMLEP 680

Query: 123 WFDALLVYTSV--------------GVDFLAKYHATIDYFKKEVRFEKPGEAEVVFQGRR 182
             + L  YT V              G+DFL  ++A++D  +KEV F KPG  EVVF+G +
Sbjct: 681 LSEGLDTYTPVGDVLLVNERLDVILGMDFLFAHYASMDCHRKEVVFRKPGFPEVVFRGMK 740

Query: 183 KILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKLRPEDVPDVK 199
           K++   +IS +KA K+L KGC T+LAH++ V+ EKL+PEDVP VK
Sbjct: 741 KVVSRSLISVLKAEKLLRKGCTTFLAHIVVVQREKLKPEDVPVVK 785

[Close]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C    HFKRDCPQLR     +QG  S  V Q +  T  G+ +S  RQ+G    
Sbjct: 552 GAGVCYQCGKTGHFKRDCPQLRVVVRRDQGVESHTVEQSRISTAAGEETSGARQKGVVGR 611

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+T T+ IC+  T VL+D GAT SFVS  F   +N+ LEP
Sbjct: 612 PRQQGKVYAMTQQEAEDAPDVITETILICNVPTRVLLDSGATHSFVSSMFLTKINRMLEP 671

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L++ T V                                      G+DFL  ++A+
Sbjct: 672 LPEELVICTPVGDVLLVSEVLCDCEVVVEGLYMSVDLLPLELQTLDVILGMDFLFTHYAS 731

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 198
           ++  +KEV F+KPG  EV+F+G R I+PT +ISA+KA K+L KGC  +LAHV++V+ EKL
Sbjct: 732 MNCHRKEVTFKKPGSTEVIFKGERNIIPTSLISALKAEKLLRKGCTAFLAHVVEVQEEKL 791

[Close]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C    HFKRDCPQLR     +QG  S  V Q +  T  G+ +S  RQ+G    
Sbjct: 552 GAGVCYQCGKTGHFKRDCPQLRVVVRRDQGVESHTVEQSRISTAAGEETSGARQKGVVGR 611

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQEAE  P+V+T T+ IC+  T VL+D GAT SFVS  F   +N+ LEP
Sbjct: 612 PRQQGKVYAMTQQEAEDAPDVITETILICNVPTRVLLDSGATHSFVSSMFLTKINRMLEP 671

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L++ T V                                      G+DFL  ++A+
Sbjct: 672 LPEELVICTPVGDVLLVSEVLCDCEVVVEGLYMSVDLLPLELQTLDVILGMDFLFTHYAS 731

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 198
           ++  +KEV F+KPG  EV+F+G R I+PT +ISA+KA K+L KGC  +LAHV++V+ EKL
Sbjct: 732 MNCHRKEVTFKKPGSTEVIFKGERNIIPTSLISALKAEKLLRKGCTAFLAHVVEVQEEKL 791

[Close]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL
Match: A0A5A7VQD2 (Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00150 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 97/249 (38.96%), Postives = 131/249 (52.61%), Query Frame = 0


Query: 3   GANICYNCEHPCHFKRDCPQLRPRNEVEQGTVSQIVNQPKQGTGTGDASSAGRQRG---- 62
           GA +CY C  P HFK+DCPQL+   + +QG  SQ + Q +      + +S  RQ+G    
Sbjct: 340 GAGVCYQCGQPGHFKKDCPQLKMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGR 399

Query: 63  -----------QQEAEKTPNVVTGTMTICSKTTYVLIDLGATRSFVSRAFAMHVNKRLEP 122
                      QQE E  P+V+TGT+ IC+    VL D GAT SFVS  F   +N+ LEP
Sbjct: 400 PRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEP 459

Query: 123 WFDALLVYTSV--------------------------------------GVDFLAKYHAT 182
             + L +YT V                                      G+DFL  ++A+
Sbjct: 460 LSEGLAIYTPVGDVLLVNEVLRNREVLVEGISLLVDLLPLELQRLDVILGMDFLFAHYAS 519

Query: 183 IDYFKKEVRFEKPGEAEVVFQGRRKILPTCVISAVKARKMLSKGCETYLAHVIKVKLEKL 199
           +D  +KEV F KPG AEVVF+G RK +   +IS +KA K+L KGC  +LAH++ V+ EKL
Sbjct: 520 MDCHRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKL 579

The following BLAST results are available for this feature:

BLAST of Cla97C04G070105.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06319.1	1.1e-40	43.56	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0041696.1	5.7e-40	43.56	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0037581.1	3.7e-39	40.32	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	3.7e-39	40.32	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0045363.1	2.6e-37	39.76	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cla97C04G070105.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7J1	5.5e-41	43.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold59...	[more]
A0A5A7TI15	2.7e-40	43.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3BTP3	1.8e-39	40.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	1.8e-39	40.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7VQD2	1.3e-37	38.96	Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Cla97C04G070105.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 59..117 e-value: 4.9E-9 score: 36.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..66
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 117..198
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 117..198
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 7..22 score: 8.976924

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C04G070105	Cla97C04G070105	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C04G070105.1-exon	Cla97C04G070105.1-exon-Cla97Chr04:8735764..8735940	exon
Cla97C04G070105.1-exon	Cla97C04G070105.1-exon-Cla97Chr04:8735986..8736163	exon
Cla97C04G070105.1-exon	Cla97C04G070105.1-exon-Cla97Chr04:8736277..8736548	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C04G070105.1-cds	Cla97C04G070105.1-cds-Cla97Chr04:8735764..8735940	CDS
Cla97C04G070105.1-cds	Cla97C04G070105.1-cds-Cla97Chr04:8735986..8736163	CDS
Cla97C04G070105.1-cds	Cla97C04G070105.1-cds-Cla97Chr04:8736277..8736548	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C04G070105.1	Cla97C04G070105.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016787	hydrolase activity