Cla97C02G029360.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C02G029360.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 2578768 .. 2579431 (-)
Sequence length285
RNA-Seq ExpressionCla97C02G029360.1
SyntenyCla97C02G029360.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAGTTGCACGTTGCCCTATTCTCTCCCAGATTATCACACTTACCACACTTTTTGGTTGGACGGTGTTCACACTAGCCCACCTCATCAGGCTGGGATGCGACCATATCGTGCTAGAAAGGTCATCTCTAACATGATATTACTTAAAACTCTGATAGTGCACTATAACATAAGTATAAGGTTAGATTTCATTTGTTTATGGGGCGATTCATTAAACAATTAAGGGGGCCTGGGAAATGGTTGTCCATTTTTATTCATCTTCATCTTTTTCATCCTTGTAAATGCGCATGATTAATGAGTTTGCCGGATGGATGACCCAAATTTGGGGGAGGGAAAACGAGATTTGCTCTCCTTTATGAAAATGAGGTTTTTTGACCCATTGTTGATGTCAAATTTGGGTGAAATTACCAAAAAGAAACTTTGCACACGCAGAATGGGCTTTCTCGCTCTTGTACTCTTATGCTTGCACACTCGCTCTCTTGCTCACTTTCCTCTCACAGATCGCTTCCTTTTCCCTCTTTCTGTCGCGGTCTCACTCTCTTATTCTCACTCTTTTGGCCTTGCTCTCTGGAGCTCGGTCTCACTCTCCAATGCAACTGAATAGAGGGAGGGAAGAAGAAGAAGATGGCATGAGCTTCTCGTGTGGACTCGCTACACTATGA

mRNA sequence

ATGGTCAGTTGCACGTTGCCCTATTCTCTCCCAGATTATCACACTTACCACACTTTTTGGTTGGACGGTGTTCACACTAGCCCACCTCATCAGGCTGGGATGCGACCATATCGTGCTAGAAAGATCGCTTCCTTTTCCCTCTTTCTGTCGCGGTCTCACTCTCTTATTCTCACTCTTTTGGCCTTGCTCTCTGGAGCTCGGTCTCACTCTCCAATGCAACTGAATAGAGGGAGGGAAGAAGAAGAAGATGGCATGAGCTTCTCGTGTGGACTCGCTACACTATGA

Coding sequence (CDS)

ATGGTCAGTTGCACGTTGCCCTATTCTCTCCCAGATTATCACACTTACCACACTTTTTGGTTGGACGGTGTTCACACTAGCCCACCTCATCAGGCTGGGATGCGACCATATCGTGCTAGAAAGATCGCTTCCTTTTCCCTCTTTCTGTCGCGGTCTCACTCTCTTATTCTCACTCTTTTGGCCTTGCTCTCTGGAGCTCGGTCTCACTCTCCAATGCAACTGAATAGAGGGAGGGAAGAAGAAGAAGATGGCATGAGCTTCTCGTGTGGACTCGCTACACTATGA

Protein sequence

MVSCTLPYSLPDYHTYHTFWLDGVHTSPPHQAGMRPYRARKIASFSLFLSRSHSLILTLLALLSGARSHSPMQLNRGREEEEDGMSFSCGLATL
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C02G029360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C02G029360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C02G029360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C02G029360.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..94

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C02G029360Cla97C02G029360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C02G029360.1-exonCla97C02G029360.1-exon-Cla97Chr02:2578768..2578929exon
Cla97C02G029360.1-exonCla97C02G029360.1-exon-Cla97Chr02:2579309..2579431exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C02G029360.1-cdsCla97C02G029360.1-cds-Cla97Chr02:2578768..2578929CDS
Cla97C02G029360.1-cdsCla97C02G029360.1-cds-Cla97Chr02:2579309..2579431CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C02G029360.1Cla97C02G029360.1-proteinpolypeptide