Cla97C01G004690.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C01G004690.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr01: 4504959 .. 4506095 (+)
Sequence length195
RNA-Seq ExpressionCla97C01G004690.1
SyntenyCla97C01G004690.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGGTATTCCCTGACTTCATATGTGGCATTTATGTAAGAAAATGCATTACATAGAAAGTTCCACTTTACACCTTCATATGTATATTTAAATTACTTTTGCCAGTCAGAAAGAAATAAGGGACAAGAAAGACATGTTCTGCTCATACTTATTGATCACCCCTTTATATTATAATGAAGTTGCATGCTCACAAAAACCAATTGTTTTCACTGGTTCTTATCAAGAATCCTTGCTGATAGAAATGGATATTCTTCTGCAGTTTTATAATTTTTCTACCGTATAATTTGTGTTTGAAATGAAAGGAAGTCGTGTGCATTTCCTATTGAAAAAGAAATATGATTCGTCTTATGGTTAATTGTGTTTTTCTTCATTGTACAGCTGTTCCTTTGATCATTCTCAAAGGATTTAACGCATTGACATCAAACTAGAAGGAGGGTTTGGAAACTCTATGAACTAAGTTTGAATTGATATCTTTATTAAAGTAATAGACAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAATTATTTGTAAAATCTTTGAATGAGTAATTCCTCCCTGGTCATCTCTCATCAATTATGGTAGAGGTTTACTTGGTTTTTGATACTCTACATACATATTTTAGGTATTGTTTCATAACTATTTGAGTTTTTAAACTTTAAGCTCATGTGTACTACTTCTACTGATTTGTTCTTTTTATTTTGTTATTTACTTCCTACTAATGTTAAGCTTAGAAAACTAAAACAAAGTAGGCCTAATGTTTTTGTTCTGAAATTTATGTGTATTTTTGCACTGTTTTTTTTAGTATAGATTTTACCCGTTAAATTCCAAAAATAAAAATAAATTTTTGGAACTCAAAAGAGTAATTTTTGTTATTGAAGTTTAAGTTGAAAATTGTGAGAAAAAAAGGACAATTTTCAAACATCGTTTTAAATGGAGCCTTTATGTTTTTGTTTTGTGAACAATGGATAATAGGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

mRNA sequence

ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

Coding sequence (CDS)

ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

Protein sequence

MKFRRFKKRPSCLQGLVQSVAMWFACPFDENKVVRVIKPREAFTFKRFEADSVIFILTAQDSHH
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C01G004690.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G004690.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G004690.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G004690.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 8.0

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C01G004690Cla97C01G004690gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G004690.1-exonCla97C01G004690.1-exon-Cla97Chr01:4504959..4504990exon
Cla97C01G004690.1-exonCla97C01G004690.1-exon-Cla97Chr01:4505478..4505541exon
Cla97C01G004690.1-exonCla97C01G004690.1-exon-Cla97Chr01:4505997..4506095exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G004690.1-cdsCla97C01G004690.1-cds-Cla97Chr01:4504959..4504990CDS
Cla97C01G004690.1-cdsCla97C01G004690.1-cds-Cla97Chr01:4505478..4505541CDS
Cla97C01G004690.1-cdsCla97C01G004690.1-cds-Cla97Chr01:4505997..4506095CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C01G004690.1Cla97C01G004690.1-proteinpolypeptide