ClCG11G000010.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G000010.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Alpha/beta-Hydrolases superfamily protein
Location	CG_Chr11: 12705 .. 13034 (-)
Sequence length	330
RNA-Seq Expression	ClCG11G000010.2
Synteny	ClCG11G000010.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTTTCAGGTCCCTGCAAGCGATACCAGTTTTATGGGTGTTGTCCTTGGGTTTGGCAGGTGCCCGCCAAAGGAGGGAAGGCTGCCTGTCGATTCCTATTGGCTTACGTGCAGGTATAACGGCATCTAGTTTTATTTTTCAGAAGGGTGGATTCATAAGCTATAAGCCCATCCCTATGCATCATCCTGTGTGGATTATGGGTATCGACACACAACAACCATTGAGTGGGGTGGCTGGCTTTGCATTTGCTTTGTTGGTGGCTTGCATTTTCTTACCCAGAAATCCCATGGAGAAGAAGAATTTGAGGAGGACGATTCGAGAGTAG

mRNA sequence

ATGTCGGGTTTCAGGTCCCTGCAAGCGATACCAGTTTTATGGGTGTTGTCCTTGGGTTTGGCAGGTGCCCGCCAAAGGAGGGAAGGCTGCCTGTCGATTCCTATTGGCTTACGTGCAGGTATAACGGCATCTAGTTTTATTTTTCAGAAGGGTGGATTCATAAGCTATAAGCCCATCCCTATGCATCATCCTGTGTGGATTATGGGTATCGACACACAACAACCATTGAGTGGGGTGGCTGGCTTTGCATTTGCTTTGTTGGTGGCTTGCATTTTCTTACCCAGAAATCCCATGGAGAAGAAGAATTTGAGGAGGACGATTCGAGAGTAG

Coding sequence (CDS)

ATGTCGGGTTTCAGGTCCCTGCAAGCGATACCAGTTTTATGGGTGTTGTCCTTGGGTTTGGCAGGTGCCCGCCAAAGGAGGGAAGGCTGCCTGTCGATTCCTATTGGCTTACGTGCAGGTATAACGGCATCTAGTTTTATTTTTCAGAAGGGTGGATTCATAAGCTATAAGCCCATCCCTATGCATCATCCTGTGTGGATTATGGGTATCGACACACAACAACCATTGAGTGGGGTGGCTGGCTTTGCATTTGCTTTGTTGGTGGCTTGCATTTTCTTACCCAGAAATCCCATGGAGAAGAAGAATTTGAGGAGGACGATTCGAGAGTAG

Protein sequence

MSGFRSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHPVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE

Homology

[Close]

BLAST of ClCG11G000010.2 vs. NCBI nr
Match: XP_031741359.1 (uncharacterized protein LOC101219570 isoform X3 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48
Identity = 99/105 (94.29%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
            RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGI ASSFIFQKGGFISYKPIP HHP
Sbjct: 1377 RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGIMASSFIFQKGGFISYKPIPTHHP 1436

Query: 65   VWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
            VWIM ID  QPLSGVAGFAFALLVACIF PRNPMEKKNLRRTIRE
Sbjct: 1437 VWIMRIDIHQPLSGVAGFAFALLVACIFFPRNPMEKKNLRRTIRE 1481

[Close]

BLAST of ClCG11G000010.2 vs. NCBI nr
Match: XP_011655435.1 (uncharacterized protein LOC101219570 isoform X1 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48
Identity = 99/105 (94.29%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
            RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGI ASSFIFQKGGFISYKPIP HHP
Sbjct: 1657 RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGIMASSFIFQKGGFISYKPIPTHHP 1716

Query: 65   VWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
            VWIM ID  QPLSGVAGFAFALLVACIF PRNPMEKKNLRRTIRE
Sbjct: 1717 VWIMRIDIHQPLSGVAGFAFALLVACIFFPRNPMEKKNLRRTIRE 1761

[Close]

BLAST of ClCG11G000010.2 vs. NCBI nr
Match: XP_038876516.1 (uncharacterized protein LOC120068949 [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 98/105 (93.33%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
            RSLQAIP+LWVLSLGLAGARQRREGCLSIPIGLRAGI ASSFI QKGGFISYKPIP HHP
Sbjct: 1659 RSLQAIPILWVLSLGLAGARQRREGCLSIPIGLRAGIMASSFISQKGGFISYKPIPTHHP 1718

Query: 65   VWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
            VWIMGID  QPLSGVAGFAFALLVACIF PRNPMEKKNLRRTIRE
Sbjct: 1719 VWIMGIDPHQPLSGVAGFAFALLVACIFFPRNPMEKKNLRRTIRE 1763

[Close]

BLAST of ClCG11G000010.2 vs. NCBI nr
Match: XP_023530074.1 (uncharacterized protein LOC111792735 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47
Identity = 98/106 (92.45%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IPMHH
Sbjct: 1663 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPMHH 1722

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM+KKNLRRTIRE
Sbjct: 1723 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPMKKKNLRRTIRE 1768

[Close]

BLAST of ClCG11G000010.2 vs. NCBI nr
Match: XP_023530096.1 (uncharacterized protein LOC111792735 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47
Identity = 98/106 (92.45%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IPMHH
Sbjct: 1369 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPMHH 1428

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM+KKNLRRTIRE
Sbjct: 1429 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPMKKKNLRRTIRE 1474

[Close]

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL
Match: A0A0A0KSL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G535000 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.9e-49
Identity = 99/105 (94.29%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 5   RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
           RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGI ASSFIFQKGGFISYKPIP HHP
Sbjct: 184 RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGIMASSFIFQKGGFISYKPIPTHHP 243

Query: 65  VWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
           VWIM ID  QPLSGVAGFAFALLVACIF PRNPMEKKNLRRTIRE
Sbjct: 244 VWIMRIDIHQPLSGVAGFAFALLVACIFFPRNPMEKKNLRRTIRE 288

[Close]

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL
Match: A0A6J1EYN6 (uncharacterized protein LOC111439764 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439764 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IP HH
Sbjct: 1663 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPTHH 1722

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM KKNLRRTIRE
Sbjct: 1723 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPM-KKNLRRTIRE 1767

[Close]

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL
Match: A0A6J1EY34 (uncharacterized protein LOC111439764 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111439764 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IP HH
Sbjct: 1369 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPTHH 1428

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM KKNLRRTIRE
Sbjct: 1429 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPM-KKNLRRTIRE 1473

[Close]

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL
Match: A0A6J1K6M7 (uncharacterized protein LOC111492131 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492131 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IPMHH
Sbjct: 1663 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPMHH 1722

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM KKNL RTIRE
Sbjct: 1723 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPMLKKNL-RTIRE 1767

[Close]

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL
Match: A0A6J1KAN7 (uncharacterized protein LOC111492131 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492131 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKP-IPMHH 64
            RSLQAIPVLWVLSLGLAGARQRR+GCLSIPIGLRAGITASSFIF KGGFISYKP IPMHH
Sbjct: 1369 RSLQAIPVLWVLSLGLAGARQRRDGCLSIPIGLRAGITASSFIFLKGGFISYKPSIPMHH 1428

Query: 65   PVWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKKNLRRTIRE 110
             +WIMGIDT QPLSGVAGFAFALLVACIF PRNPM KKNL RTIRE
Sbjct: 1429 SLWIMGIDTHQPLSGVAGFAFALLVACIFFPRNPMLKKNL-RTIRE 1473

[Close]

BLAST of ClCG11G000010.2 vs. TAIR 10
Match: AT2G03140.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-22
Identity = 51/97 (52.58%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
            RSL++IP  W+LSL L  AR+R +G L +PIGLRAGI ASSFI Q GGF++Y P     P
Sbjct: 1699 RSLRSIPGFWLLSLALTWARERSQGNLIVPIGLRAGIIASSFILQSGGFLTYNP---SSP 1758

Query: 65   VWIMGIDTQQPLSGVAGFAFALLVACIFLPRNPMEKK 102
            VWI G    QP SGV G   +L +A I  P+   E K
Sbjct: 1759 VWIAGSRPSQPFSGVVGLMVSLALALILYPKRSPETK 1792

[Close]

BLAST of ClCG11G000010.2 vs. TAIR 10
Match: AT2G03140.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 7.3e-21
Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 5    RSLQAIPVLWVLSLGLAGARQRREGCLSIPIGLRAGITASSFIFQKGGFISYKPIPMHHP 64
            RSL++IP  W+LSL L  AR+R +G L +PIGLRAGI ASSFI Q GGF++Y P     P
Sbjct: 1699 RSLRSIPGFWLLSLALTWARERSQGNLIVPIGLRAGIIASSFILQSGGFLTYNP---SSP 1758

Query: 65   VWIMGIDTQQPLSGVAGFAFALLVACIFLPR 96
            VWI G    QP SGV G   +L +A I  P+
Sbjct: 1759 VWIAGSRPSQPFSGVVGLMVSLALALILYPK 1786

The following BLAST results are available for this feature:

BLAST of ClCG11G000010.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741359.1	1.0e-48	94.29	uncharacterized protein LOC101219570 isoform X3 [Cucumis sativus]	[more]
XP_011655435.1	1.0e-48	94.29	uncharacterized protein LOC101219570 isoform X1 [Cucumis sativus]	[more]
XP_038876516.1	1.3e-48	93.33	uncharacterized protein LOC120068949 [Benincasa hispida]	[more]
XP_023530074.1	1.9e-47	92.45	uncharacterized protein LOC111792735 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023530096.1	1.9e-47	92.45	uncharacterized protein LOC111792735 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG11G000010.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G000010.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSL7	4.9e-49	94.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G535000 PE=4 SV=1	[more]
A0A6J1EYN6	1.9e-45	91.51	uncharacterized protein LOC111439764 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EY34	1.9e-45	91.51	uncharacterized protein LOC111439764 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K6M7	2.5e-45	91.51	uncharacterized protein LOC111492131 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KAN7	2.5e-45	91.51	uncharacterized protein LOC111492131 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of ClCG11G000010.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03140.1	8.7e-22	52.58	alpha/beta-Hydrolases superfamily protein	[more]
AT2G03140.2	7.3e-21	53.85	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43592	CAAX AMINO TERMINAL PROTEASE	coord: 5..102
None	No IPR available	PANTHER	PTHR43592:SF20	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 5..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG11G000010	ClCG11G000010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G000010.2-exon	ClCG11G000010.2-exon-CG_Chr11:12705..13034	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG11G000010.2-cds	ClCG11G000010.2-cds-CG_Chr11:12705..13034	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG11G000010.2	ClCG11G000010.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane