ClCG10G017400.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCCTTGTTGTAGCGTATGCGTCCGAGCTTCCAAGGGTCCCAACTCCCAAGCTATGGCGGAATCAGCTTTCAGGCAAACCAACGAACCAGACGATGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGAAGATACTAGCTCTTCAAAATCCATGTCCAAAAAGGTAACCACTGATGGCTTTGCTAGAGTTCTTCAGCTAATTTTTGAGTTGTCCAACGGATTTTCTGTCTCATTTCATCTAAATTCTAGGGTTAGATACCCTATTCATTTTAAGTTTTTCTTGGACTTAGAAGGGAATTTTGATTTCAGGTTCCTGCTAATAAAACCCCTGCTGTTCAATCATCGAATAAGAAACCCAAAACCTTCCATTGGCAAGAACAGCGAAGACGGGATAGAGAACGGAAGCAACTCGAAGAGGATGAACAGACATTGGCCAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAATTGTTGAAGCAAATGGGGTATACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCCGGACTGGCAGAGCCTGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGGCAGAAGTTGCAGTGGCGAAGTCGTAGAATTGTGATCAATTATAACAAGGCGAAGGCAGCACTTGATCAATTGGAGAACAAGGAAGTTGTGGAGCCAGAGAAGGATAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGTACAGTTCTATTCTGCAAACCTTTCTTTTCTATGATATTGGTAGGTCTAAAAGTGAGAATGATTGATCATTTACTTGCATAGTTTCAAATTGATTCGCATTCTGAAGCTAGAGCTAGTTAACATCATATTACCCTATAATTGACCATTGGCTTGCATAGTTTGACATTGATTTGAGGTATAGAGAGGGTCGATGTTCGGTCCCCAGTGAAATTCTATATTTCTCTCTAGGCGTTGGTGACACAATCCTTTTGTAGTTGTACGTTAGGTTTTGTTAGGTCTTGTTGTTCATAGTTTGAGTTCATTTCTTTAGTGGGACTTTCTCTATGTGGGTTTAGTTTTGGATGCCCTTGTATTCTTTCATTCTTTTTAAATGAAAGATCCGCTTTTATAAATAATAAAAATAAAACAAGTGAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGCTACCCTATCTAAAATGCACAACAATAGGAAGAAGGCAAATTTAGTCGCCTGTGGAGAGTTGCAGTCTTAGCATGAATTAAGTTGCAATGCCGTGGTGAAGGGCAGGCCAGAAACGCCAATCAAACTGTGGTATAATTTCCTTTAATAGATTTACAGGGTACTTCTTTGCCAAATGCTTTAGTCAATTGAATGCTTTTCGTGATTTTGTCATCTCTTGGATCTTATATCTAGGCCATTTGTTGGAAGTGTGGTTGATTCTCATAAAGAAAAATCAAACAAGAAAAATAATTCTGTAGGATGAAAATCTTGGTATGATTGAACCGGTTTTCTTTAGGCTCCATCATTTACTACCCATTTGATAACCATTTCATTTTTTGTCTTTGTTTTTTAAAATTAAGCCTATAGACACTACTTCCTCCTCCAAATTTCTTCCTTTGTTGTCTAGTTTTTACCAACGGTTTAAAAAACCAAGCTAATTTTTGAAAACTAAAAAAAGTAACTTTTAAAAACTTGTTTTTGATTTTGAAATTTGGTTAAGAATTCAATCATTGTACCTAAGAAAGATGCAAATCATTGTAAGAAATGAGGAGGAAATAGGCTTAATTTCGAAAACCAAAAACCAAAAACAAAATGATTACCAAACGGGATCTTAGTTTTTGGTTTTTAGTTTTCTTAAAATCAAGCTTAAAGTAATAAACGTTCTACCTATTGATTTCTTTGTTTTGTTATCTTCTTAGTTTAAAAATTTGAGCAGGTTTTGAAAACTAAAAAAAGTTAGTTTTTGTTTTTGGAATTTAGCTAAGAAAACAAATTTATAGTTAAGAAAGATGAAAACCATAGGAAATAAGTGGTAAGAAAACAAGCATAATTTTTAAAAACCAAATAATTATCAAACGAATTGTTAACAATGTTTACAATCGAAGGGGAGATCAAAAGCACCCACCACTCTCTTCTCCACATAGAAAGACTAAGAAGTTGCTCAAAAAGATACTTTCCTCTCACAGCTAACTTGCTGAACAGCCCTCCACAGACTTGGCCTTCTGAATAATTGAATACCAAGAGGCCCTCACGCATTTGGTAAATTTTCCTCTCACCCAGGTTCTTTTTAGGACAACATAGACAAAAGTAGCAGAACAAAACAAACTAGAGGACTACATCACAAGTCACAATCTTCGAAAACCCCATTAGGAACTTTAGAACTTAAATACACAGTTGTACAACCGTTATAATAAATGAAATATTGTATAAGTAAACCTGTTATCACAAAACTTTAAGTTTTATCGTTTATGTGTATTCAATATCTTCTATGACGAGGCTTCTTTTCTAGACATAATGACTTGCCTGTCGGCCTTTACACATTATTCTAGCACTATTTCAATCGAATGAGCTTGCTTGGGACTTGGAATAAAATATTCCTGTGATCGATGCAGGATTTGGAGGATATATTGTTGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGGTGAGTGTATTTCCCCAATCTTTAAAGACAATTTTTCAAGATTGAGGCATTTCACGTATCCTGACATCATTCTGCTGCTGATGCCAGTACGACTCAATGGAGTCCCTCCAATCTAACTGCCCTGGAATCAGTGAAGATGATCACTAAACTATACTTCGGCAGAGATGGATTTTGAACCTGATTAGCATGACTTTCTAAGTCCTTGAAAAGTGTTTTTAAATGTTTTTCAGTACTAAGAAAGTCGATCCAAACAGGCTTCTTTGGTGTTGTCGTCTCCCCCTTCATATCAAGGGCTGCATCATGTGCTTTACCATGCCTTCTTTGTCAATGTTCTTAACACAAATGGTGGTCTCTCGGAAAGAAAGCCGATCTGAAATTGCTGTGCAGAAATCGGAATAGCATTTTTTCCCTTCTGGAATCATCTATCCTTGTCAATGGATAGCCAGATATTGAACAAGTTTGTTCAGATTGAGGCATAGAAGTAGGAGTTCACAACACCAAATCTGCTTTATACACTCATCCTTGGGCCAAGCTCCCTCCTATCGTGTCCCTTTGAGTGCAAAATGTGAGAGAATTTGAACAGTAATGTTGAATTCAAGTTACTTGGCAGCAGCTCGCATTAATTTGGCGGGAAAGTGCTGTGACATGTATGTTGAATACCCTTTAAGAAAATATCTTAATTTATTC GCGCCTTGTTGTAGCGTATGCGTCCGAGCTTCCAAGGGTCCCAACTCCCAAGCTATGGCGGAATCAGCTTTCAGGCAAACCAACGAACCAGACGATGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGAAGATACTAGCTCTTCAAAATCCATGTCCAAAAAGGTTCCTGCTAATAAAACCCCTGCTGTTCAATCATCGAATAAGAAACCCAAAACCTTCCATTGGCAAGAACAGCGAAGACGGGATAGAGAACGGAAGCAACTCGAAGAGGATGAACAGACATTGGCCAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAATTGTTGAAGCAAATGGGGTATACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCCGGACTGGCAGAGCCTGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGGCAGAAGTTGCAGTGGCGAAGTCGTAGAATTGTGATCAATTATAACAAGGCGAAGGCAGCACTTGATCAATTGGAGAACAAGGAAGTTGTGGAGCCAGAGAAGGATAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGGATATATTGTTGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGAGTCCCTCCAATCTAACTGCCCTGGAATCAGTGAAGATGATCACTAAACTATACTTCGGCAGAGATGGATTTTGAACCTGATTAGCATGACTTTCTAAGTCCTTGAAAAGTGTTTTTAAATGTTTTTCAGTACTAAGAAAGTCGATCCAAACAGGCTTCTTTGGTGTTGTCGTCTCCCCCTTCATATCAAGGGCTGCATCATGTGCTTTACCATGCCTTCTTTGTCAATGTTCTTAACACAAATGGTGGTCTCTCGGAAAGAAAGCCGATCTGAAATTGCTGTGCAGAAATCGGAATAGCATTTTTTCCCTTCTGGAATCATCTATCCTTGTCAATGGATAGCCAGATATTGAACAAGTTTGTTCAGATTGAGGCATAGAAGTAGGAGTTCACAACACCAAATCTGCTTTATACACTCATCCTTGGGCCAAGCTCCCTCCTATCGTGTCCCTTTGAGTGCAAAATGTGAGAGAATTTGAACAGTAATGTTGAATTCAAGTTACTTGGCAGCAGCTCGCATTAATTTGGCGGGAAAGTGCTGTGACATGTATGTTGAATACCCTTTAAGAAAATATCTTAATTTATTC ATGGCGGAATCAGCTTTCAGGCAAACCAACGAACCAGACGATGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGAAGATACTAGCTCTTCAAAATCCATGTCCAAAAAGGTTCCTGCTAATAAAACCCCTGCTGTTCAATCATCGAATAAGAAACCCAAAACCTTCCATTGGCAAGAACAGCGAAGACGGGATAGAGAACGGAAGCAACTCGAAGAGGATGAACAGACATTGGCCAGAATAGAGGCTCCGATTCCACAATCGAACATTGGATTTAAATTGTTGAAGCAAATGGGGTATACTCCTGGCGCAGCTTTGGGCAAGGAGGGATCCGGACTGGCAGAGCCTGTGGGACTTGAGATTCGACGGTCACGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGGCAGAAGTTGCAGTGGCGAAGTCGTAGAATTGTGATCAATTATAACAAGGCGAAGGCAGCACTTGATCAATTGGAGAACAAGGAAGTTGTGGAGCCAGAGAAGGATAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGGATATATTGTTGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGAGTCCCTCCAATCTAACTGCCCTGGAATCAGTGAAGATGATCACTAA MAESAFRQTNEPDDEEEDYMGDLSKLLPPEDTSSSKSMSKKVPANKTPAVQSSNKKPKTFHWQEQRRRDRERKQLEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVINYNKAKAALDQLENKEVVEPEKDNEEEGEQEEEEEEIITEEDLEDILLKLRDEHRYCLFCGYQYDSMESLQSNCPGISEDDH Homology
BLAST of ClCG10G017400.1 vs. NCBI nr
Match: XP_038903037.1 (G patch domain-containing protein 11 [Benincasa hispida]) HSP 1 Score: 461.8 bits (1187), Expect = 3.8e-126 Identity = 247/260 (95.00%), Postives = 255/260 (98.08%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. NCBI nr
Match: XP_008443073.1 (PREDICTED: G patch domain-containing protein 11 [Cucumis melo] >TYK25414.1 G patch domain-containing protein 11 [Cucumis melo var. makuwa]) HSP 1 Score: 461.8 bits (1187), Expect = 3.8e-126 Identity = 246/260 (94.62%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. NCBI nr
Match: XP_004136577.1 (G patch domain-containing protein 11 [Cucumis sativus] >KGN59316.1 hypothetical protein Csa_001400 [Cucumis sativus]) HSP 1 Score: 461.1 bits (1185), Expect = 6.5e-126 Identity = 245/260 (94.23%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. NCBI nr
Match: KAG6580816.1 (G patch domain-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017567.1 G patch domain-containing protein 11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437.2 bits (1123), Expect = 1.0e-118 Identity = 235/261 (90.04%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. NCBI nr
Match: XP_022935377.1 (G patch domain-containing protein 11 [Cucurbita moschata]) HSP 1 Score: 436.4 bits (1121), Expect = 1.7e-118 Identity = 234/261 (89.66%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy Swiss-Prot
Match: Q3UFS4 (G patch domain-containing protein 11 OS=Mus musculus OX=10090 GN=Gpatch11 PE=1 SV=2) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17 Identity = 82/269 (30.48%), Postives = 134/269 (49.81%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy Swiss-Prot
Match: Q8N954 (G patch domain-containing protein 11 OS=Homo sapiens OX=9606 GN=GPATCH11 PE=1 SV=4) HSP 1 Score: 89.7 bits (221), Expect = 5.1e-17 Identity = 84/269 (31.23%), Postives = 140/269 (52.04%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy Swiss-Prot
Match: Q2KI19 (G patch domain-containing protein 11 OS=Bos taurus OX=9913 GN=GPATCH11 PE=2 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17 Identity = 81/269 (30.11%), Postives = 142/269 (52.79%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy Swiss-Prot
Match: Q6DGZ0 (G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17 Identity = 83/269 (30.86%), Postives = 140/269 (52.04%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy Swiss-Prot
Match: Q6DF57 (G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.3e-16 Identity = 75/269 (27.88%), Postives = 135/269 (50.19%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy TrEMBL
Match: A0A5D3DP78 (G patch domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005560 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.8e-126 Identity = 246/260 (94.62%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy TrEMBL
Match: A0A1S3B6R8 (G patch domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103486779 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.8e-126 Identity = 246/260 (94.62%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy TrEMBL
Match: A0A0A0LGZ2 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G809920 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.1e-126 Identity = 245/260 (94.23%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy TrEMBL
Match: A0A6J1F5D4 (G patch domain-containing protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111442279 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.3e-119 Identity = 234/261 (89.66%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. ExPASy TrEMBL
Match: A0A6J1J6Q6 (G patch domain-containing protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111481728 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118 Identity = 233/261 (89.27%), Postives = 251/261 (96.17%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. TAIR 10
Match: AT3G57910.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 278.9 bits (712), Expect = 4.2e-75 Identity = 156/252 (61.90%), Postives = 202/252 (80.16%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 ) HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 ) HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. TAIR 10
Match: AT5G26610.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of ClCG10G017400.1 vs. TAIR 10
Match: AT5G26610.2 (D111/G-patch domain-containing protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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