ClCG10G014590.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G014590.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr10: 29025161 .. 29025651 (-)
Sequence length	435
RNA-Seq Expression	ClCG10G014590.1
Synteny	ClCG10G014590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTGGAAGTTGGAAGAGGAAGAAGTATTGGTAAAAAGAGAGAAAAAGAGAGTAAGGAGAAAGGACAAGAGAGAAACCAAGAAAGAAAAGGGGAACAGAGAGAAAGAAGGGGAAGAACGGAGGAATGGGAGGAGGGAATAGAGTGATCGGAGCGAAAATAGAAGCAAAAACAGGAATGAAATTGAGCCTTTGTTGGAGGATTTGGGATAGAGGCGGCTCTTGGAGGGAGTGGGAGTTGGGGTTGAAGACGAATAAGGAAAGAGAGGGAAAGAGGGTCGAGAGGAGGAGGCGGCGCCGGCAGTGGAGAAATCACCGGCGCGCGGCGGAATTAAGAGGCGGTGAGGCCTCTGGTGGTGGTGATCGGCCATGGATTCCGACCTCTGAGATCGACTTTCGGATCTCTATAATGACGCCGGCCGATACGAAGGTAAAATGTAGAAGGAAAATCTCCCTTCTTTTTCCTAGAAATGTCTTCAATGGAGACTAA

mRNA sequence

ATGAAATTGGAAGTTGGAAGAGGAAGAAGTATTGGTAAAAAGAGAGAAAAAGAGAGTAAGGAGAAAGGACAAGAGAGAAACCAAGAAAGAAAAGGGGAACAGAGAGAAAGAAGGGGAAGAACGGAGGAATGGGAGGAGGGAATAGAGATTTGGGATAGAGGCGGCTCTTGGAGGGAGTGGGAGTTGGGGTTGAAGACGAATAAGGAAAGAGAGGGAAAGAGGGTCGAGAGGAGGAGGCGGCGCCGGCAGTGGAGAAATCACCGGCGCGCGGCGGAATTAAGAGGCGGTGAGGCCTCTGGTGGTGGTGATCGGCCATGGATTCCGACCTCTGAGATCGACTTTCGGATCTCTATAATGACGCCGGCCGATACGAAGGTAAAATGTAGAAGGAAAATCTCCCTTCTTTTTCCTAGAAATGTCTTCAATGGAGACTAA

Coding sequence (CDS)

ATGAAATTGGAAGTTGGAAGAGGAAGAAGTATTGGTAAAAAGAGAGAAAAAGAGAGTAAGGAGAAAGGACAAGAGAGAAACCAAGAAAGAAAAGGGGAACAGAGAGAAAGAAGGGGAAGAACGGAGGAATGGGAGGAGGGAATAGAGATTTGGGATAGAGGCGGCTCTTGGAGGGAGTGGGAGTTGGGGTTGAAGACGAATAAGGAAAGAGAGGGAAAGAGGGTCGAGAGGAGGAGGCGGCGCCGGCAGTGGAGAAATCACCGGCGCGCGGCGGAATTAAGAGGCGGTGAGGCCTCTGGTGGTGGTGATCGGCCATGGATTCCGACCTCTGAGATCGACTTTCGGATCTCTATAATGACGCCGGCCGATACGAAGGTAAAATGTAGAAGGAAAATCTCCCTTCTTTTTCCTAGAAATGTCTTCAATGGAGACTAA

Protein sequence

MKLEVGRGRSIGKKREKESKEKGQERNQERKGEQRERRGRTEEWEEGIEIWDRGGSWREWELGLKTNKEREGKRVERRRRRRQWRNHRRAAELRGGEASGGGDRPWIPTSEIDFRISIMTPADTKVKCRRKISLLFPRNVFNGD

Homology

The following BLAST results are available for this feature:

BLAST of ClCG10G014590.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G014590.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G014590.1 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G014590.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G014590	ClCG10G014590	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G014590.1-exon	ClCG10G014590.1-exon-CG_Chr10:29025161..29025449	exon
ClCG10G014590.1-exon	ClCG10G014590.1-exon-CG_Chr10:29025506..29025651	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G014590.1-cds	ClCG10G014590.1-cds-CG_Chr10:29025161..29025449	CDS
ClCG10G014590.1-cds	ClCG10G014590.1-cds-CG_Chr10:29025506..29025651	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G014590.1	ClCG10G014590.1-protein	polypeptide