ClCG09G005655.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G005655.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 4939555 .. 4940854 (-)
Sequence length318
RNA-Seq ExpressionClCG09G005655.1
SyntenyClCG09G005655.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTGTTGCTTTGAACTTAATTTATGTGCGATTTCGGAGATCGGATTAGCTCAATCGTTCCATTCTATTTATGTTCGAAAGGAATTGTATTTGTTCTGTCACTGGAATCTGCTTCTGCTCGTCTCTTATACAATTGATTATATATTTATGATATGAACAATTCTATCTATTAGGTCATCAATGGCATCAATCGCCTTATCAGTTTGTTTGAAACCCTAAATCCTTATCTTCTGTAGTCATCTTCCATCTGCTGGCATAATTTTCTTAGTTGGCTTACTTTTCAACTAGTCAATTCTGAGTCAATTAGATCATATTCCAGTGGCATCTTCTCGCTCAGGTTTCATTTTCTTGCTTGACCAATTTTCTAATTACTCTATTAGATCATATGTTCTTGTTTTGCAAATCTCTATCGGCTTGCTGTCTATTAGCTAATTACTAGATTTGAAGGATGTACTTTCTAGTTGGTCATGGTGTGCATTTGGACTGTTACATTGTTGTTTTCTCTGGATTTTTTCCCTAACAGGTAGTGATTCTAGAATCAATTCCCATCCTTCTGGATTGTTCATTTTAGGTTGTTAAGCCAATTGTTCTTTAGTTCCTTTTCTAAAACAAACATAATCTGGACTACCCAGAGTGAACTTGATTCTTGGAATCTTGTTCTATGATGTAAAATTGAAAGACAACCCCATCAGCCTTATGGATATCCCACTGATGGTGTCATCTACCAACTATTTTTCTTTCTTTCATATTTTGCTAGAGCCCCAATTCATATTCCTCAATTAGGTACATGGGGAACCAAAGATTTTGGGTATGGCGAGGTCTCATATGGTTTTGGTTATATCTTGGCAATAAACACTATTATTCCATTTTCGATCCAAAATGTCACAGTCCATTCATTGTTTGCTATTAAAGAAGCATTTAAGAATGGGGTAGAGTGTATGAAATAAAATCATATACCATTTAATGACTTGACAGGTGTTAAATAGAAGGTGAATGTAGCACCGTAATACTAGAAATTTTCTCGAGAGAAACCCCTTCTGGAGTTCAAGTTTCAGCCACAGTTTGCATTACCAAATTGTTTTTAGGTAAGTTAATCCAAACTCTATGACAAAATCACTTGATTTAAATTTCTTGGAAAGTTCGTCAATTTCCCTTCAAATTACTAGCCGGGAATCGTTCCTGGTCGGATGGGAATATTGGAATTCATTGTTTGTTTGTCCCATCTGTTCTTGGAAATGACCCCTCTATCGAATGGCAAAGTCGTTGCACGTTTTTCATGAGCATGTCCATTCCATAG

mRNA sequence

ATGTCCTGTTGCTTTGAACTTAATTTATGTGCGATTTCGGAGATCGGATTAGCTCAATCGTTCCATTCTATTTATGTTCGAAAGGAATTAGCCCCAATTCATATTCCTCAATTAGGTACATGGGGAACCAAAGATTTTGGGTATGGCGAGGTCTCATATGTTCGTCAATTTCCCTTCAAATTACTAGCCGGGAATCGTTCCTGGTCGGATGGGAATATTGGAATTCATTGTTTGTTTGTCCCATCTGTTCTTGGAAATGACCCCTCTATCGAATGGCAAAGTCGTTGCACGTTTTTCATGAGCATGTCCATTCCATAG

Coding sequence (CDS)

ATGTCCTGTTGCTTTGAACTTAATTTATGTGCGATTTCGGAGATCGGATTAGCTCAATCGTTCCATTCTATTTATGTTCGAAAGGAATTAGCCCCAATTCATATTCCTCAATTAGGTACATGGGGAACCAAAGATTTTGGGTATGGCGAGGTCTCATATGTTCGTCAATTTCCCTTCAAATTACTAGCCGGGAATCGTTCCTGGTCGGATGGGAATATTGGAATTCATTGTTTGTTTGTCCCATCTGTTCTTGGAAATGACCCCTCTATCGAATGGCAAAGTCGTTGCACGTTTTTCATGAGCATGTCCATTCCATAG

Protein sequence

MSCCFELNLCAISEIGLAQSFHSIYVRKELAPIHIPQLGTWGTKDFGYGEVSYVRQFPFKLLAGNRSWSDGNIGIHCLFVPSVLGNDPSIEWQSRCTFFMSMSIP
Homology
The following BLAST results are available for this feature:
BLAST of ClCG09G005655.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG09G005655.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG09G005655.1 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG09G005655.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG09G005655ClCG09G005655gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG09G005655.1-exonClCG09G005655.1-exon-CG_Chr09:4939555..4939712exon
ClCG09G005655.1-exonClCG09G005655.1-exon-CG_Chr09:4940024..4940094exon
ClCG09G005655.1-exonClCG09G005655.1-exon-CG_Chr09:4940766..4940854exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG09G005655.1-cdsClCG09G005655.1-cds-CG_Chr09:4939555..4939712CDS
ClCG09G005655.1-cdsClCG09G005655.1-cds-CG_Chr09:4940024..4940094CDS
ClCG09G005655.1-cdsClCG09G005655.1-cds-CG_Chr09:4940766..4940854CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG09G005655.1ClCG09G005655.1-proteinpolypeptide